prot_S-firma_M_contig9431.20418.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9431.20418.1
Unique Nameprot_S-firma_M_contig9431.20418.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length161
Homology
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BLAST of mRNA_S-firma_M_contig9431.20418.1 vs. uniprot
Match: D8LJ23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ23_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 9.180e-21
Identity = 58/91 (63.74%), Postives = 63/91 (69.23%), Query Frame = 0 
Query:   55 SHAAYEIHRAQQAIVDFLLSDPDDEGLWEGILLPPSAPSSRP-AAPGSGLGQGSPLLYLKALLVDGALGACTPAIGERCLRLALRAVGGGE 144
            SHAAY  HRAQQAIVDFLLSDPDDE L EGILLP   PSS   AAPG G  + +   Y   LL+D A+G CTPA  ERCL LALR+ G  E
Sbjct: 1103 SHAAYTPHRAQQAIVDFLLSDPDDEALLEGILLPVLFPSSSSSAAPGEGY-RDACSSYWHTLLLDAAIGTCTPATAERCLHLALRSAGNDE 1192
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BLAST of mRNA_S-firma_M_contig9431.20418.1 vs. uniprot
Match: A0A6H5L4X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4X7_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 4.330e-18
Identity = 79/167 (47.31%), Postives = 90/167 (53.89%), Query Frame = 0 
Query:    1 KAAALQALLYSRRADRFTAPPSRLGGGRTS-----------EDGSKASGKTKAIHSGSTAVEGA---ASHAAYEIHRAQQAIVDFLLSDPDDEGLWEGILLPPSAPSSRP-----AAPGSGLGQGSPLLYLKALLVDGALGACTPAIGERCLRLALRAVGGGEGGGD 148
            KAAAL+ALL+S      + PP  L    TS           E   K S + KA  S + + E A    S AA+  HRAQQAIVDFLLSDPDDE L EGILLP   PSS       AAP  G  + +   Y   LL+D A+  CTPA  ERCL LALRA G  E  GD
Sbjct:  362 KAAALEALLHS------SCPPG-LSAATTSTTTVVSHATARESEPKPSAEAKASGSTTGSKESAKSTVSQAAHTSHRAQQAIVDFLLSDPDDEALLEGILLPVLFPSSSSLSSSSAAPREGH-RDACSSYWHTLLLDAAIRKCTPATAERCLHLALRAAGNDEPAGD 520
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9431.20418.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJ23_ECTSI9.180e-2163.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4X7_9PHAE4.330e-1847.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..161
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9431contigS-firma_M_contig9431:3025..3921 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9431.20418.1mRNA_S-firma_M_contig9431.20418.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9431 3025..3921 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9431.20418.1 ID=prot_S-firma_M_contig9431.20418.1|Name=mRNA_S-firma_M_contig9431.20418.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=161bp
KAAALQALLYSRRADRFTAPPSRLGGGRTSEDGSKASGKTKAIHSGSTAV
EGAASHAAYEIHRAQQAIVDFLLSDPDDEGLWEGILLPPSAPSSRPAAPG
SGLGQGSPLLYLKALLVDGALGACTPAIGERCLRLALRAVGGGEGGGDGL
GLAPRGRRSSG
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