prot_S-firma_M_contig943.20412.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig943.20412.1
Unique Nameprot_S-firma_M_contig943.20412.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length526
Homology
[Close]
BLAST of mRNA_S-firma_M_contig943.20412.1 vs. uniprot
Match: D8LAX4_ECTSI (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAX4_ECTSI)

HSP 1 Score: 384 bits (985), Expect = 1.800e-125
Identity = 316/477 (66.25%), Postives = 334/477 (70.02%), Query Frame = 0 
Query:   58 MAAAAEPATIGVKFTSSDKGAGEVALSLESTVGALKDAIRSKFDVEPKRIIFQGRILNKDDQTLQECKLKDGLTVVVQAAQPGAPSPAXXXXXXXXXXXXXXX---------SPAAGXXXXXXXXXXXQAIQGLGLXXXXSGPMGQAVATVRAQPAGQARDCLTTLTKVIDNIIAHPTEEKYRKIKRANAGFSRKVGAVAGGEACMRALGFAEHGDAKESWLLAPSAEAWNVLNAGRAQLQGALATLPAASGAXXXXXXXXXXXXXXXXXXLPPPGAFPQPGFGGGGMXXXXXXXXXXXXXMPDLATMARMAQNPAVMQGMXXXXXXXXXXXXXXXXXXAMQSVMATPGGLAGAFEMXXXXXXXXXXXXXXXXXXXXXQRASQMDLGGAFAAGLNATGANPAQGFQPPSAGLGRQGGAPFAPPPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTEDELIAEAIRRSMED 525
            ++AA+  ATIGVKFTSSDK AG+V++SLE TVG LK AIRS+FDVEPKRIIFQGRILNKDDQTLQ+CKLKDGLTVVVQ   PGA SP XXXXXXXXXXXXXXX         +PAAG           Q++ GL  X   S P+GQAVATV  QPAG AR+CLTTLTKVIDNI AHPTEEKYRKIKRANAGFSRKVGAV GGEACMRALGF EHGDA+ESWLLAPS  AWNVL AGR  +Q ALATLP A  A                  LPPPGAFPQ GFGGG               MPD+ATMARMAQNPAVMQG XXXXXXXXXXXXXXXXXX MQSVMA PGGLA AFE        XXXXXXXXXX    QRA+QMD GGA AAG+NA   N AQGFQ P                  XXXXXXXXXXXXXXXXXXXX               TEDELIAEAIRRSMED
Sbjct:    8 VSAASATATIGVKFTSSDKAAGQVSISLEGTVGELKGAIRSQFDVEPKRIIFQGRILNKDDQTLQDCKLKDGLTVVVQVLAPGA-SPXXXXXXXXXXXXXXXXXXXXSPATPNPAAGLAAAT------QSMSGLXXXAVSSSPVGQAVATVSRQPAGVARECLTTLTKVIDNIKAHPTEEKYRKIKRANAGFSRKVGAVPGGEACMRALGFVEHGDAQESWLLAPSEAAWNVLTAGRVDIQRALATLPGAPAAAGASTGGFAGGLGV----LPPPGAFPQAGFGGG----------TGGGGMPDMATMARMAQNPAVMQGXXXXXXXXXXXXXXXXXXXXMQSVMARPGGLAQAFEAIQNNPAMXXXXXXXXXXPTALQRAAQMDFGGALAAGINAAPPNAAQGFQAPXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXASEGGGEAGEEGKEMTEDELIAEAIRRSMED 459
[Close]
BLAST of mRNA_S-firma_M_contig943.20412.1 vs. uniprot
Match: A0A7S2SMK3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SMK3_9STRA)

HSP 1 Score: 103 bits (258), Expect = 2.150e-21
Identity = 83/232 (35.78%), Postives = 124/232 (53.45%), Query Frame = 0 
Query:   61 AAEPATIGVKFTSSDKGAGEVALSLESTVGALKDAIRSKFDVEP--KRIIFQGRILNKDDQTLQECKLKDGLTVVVQAAQPGAPSPAXXXXXXXXXXXXXXXSP-AAGXXXXXXXXXXXQAIQGLGLXXXXSGPMGQAVATVRAQPAGQARDCLTTLTKVIDNIIAHPTEEKYRKIKRANAGFSRKVGAVAGGEACMRALGFAEHGDAKESWLLAPSAEAWNVLNAGRAQLQ 289
            AA   T+ VK TS ++   E+ ++ + +V A K+AI++K  V+P  +R+I +G+IL KDDQ L   K+  G TV++Q  Q  A + A                P AA            QA                A+  + + P    R  L TL KVIDNII +P E+KYR+++ ANA F+RKVG++ GG  C+R +GF + G+ + + +LAPS EAW+ LN+ R  +Q
Sbjct:    2 AANEITVKVKRTSGEQMV-EMTVAPDLSVQAFKEAIQAKLGVDPAAQRLIHKGKIL-KDDQGLDVYKVATGETVLLQVTQRPAAAGATPSGTQAPVAAAAPMPPTAAAMAGTTAPTTGIQA----------------ALEELSSNPPDALRLGLETLLKVIDNIIQNPNEDKYRRLRPANATFNRKVGSLPGGLRCVREMGFTD-GEEEGTLILAPSTEAWHHLNSCRRLVQ 214
[Close]
BLAST of mRNA_S-firma_M_contig943.20412.1 vs. uniprot
Match: A0A7S2SNT8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNT8_9STRA)

HSP 1 Score: 103 bits (258), Expect = 3.100e-20
Identity = 83/232 (35.78%), Postives = 124/232 (53.45%), Query Frame = 0 
Query:   61 AAEPATIGVKFTSSDKGAGEVALSLESTVGALKDAIRSKFDVEP--KRIIFQGRILNKDDQTLQECKLKDGLTVVVQAAQPGAPSPAXXXXXXXXXXXXXXXSP-AAGXXXXXXXXXXXQAIQGLGLXXXXSGPMGQAVATVRAQPAGQARDCLTTLTKVIDNIIAHPTEEKYRKIKRANAGFSRKVGAVAGGEACMRALGFAEHGDAKESWLLAPSAEAWNVLNAGRAQLQ 289
            AA   T+ VK TS ++   E+ ++ + +V A K+AI++K  V+P  +R+I +G+IL KDDQ L   K+  G TV++Q  Q  A + A                P AA            QA                A+  + + P    R  L TL KVIDNII +P E+KYR+++ ANA F+RKVG++ GG  C+R +GF + G+ + + +LAPS EAW+ LN+ R  +Q
Sbjct:    2 AANEITVKVKRTSGEQMV-EMTVAPDLSVQAFKEAIQAKLGVDPAAQRLIHKGKIL-KDDQGLDVYKVATGETVLLQVTQRPAAAGATPSGTQAPVAAAAPMPPTAAAMAGTTAPTTGIQA----------------ALEELSSNPPDALRLGLETLLKVIDNIIQNPNEDKYRRLRPANATFNRKVGSLPGGLRCVREMGFTD-GEEEGTLILAPSTEAWHHLNSCRRLVQ 214
[Close]
BLAST of mRNA_S-firma_M_contig943.20412.1 vs. uniprot
Match: B8C198_THAPS (Ubiquitin-like domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C198_THAPS)

HSP 1 Score: 80.9 bits (198), Expect = 1.390e-12
Identity = 48/113 (42.48%), Postives = 67/113 (59.29%), Query Frame = 0 
Query:  189 SGPMGQAVATVRAQPAGQA-RDCLTTLTKVIDNIIAHPTEEKYRKIKRANAGFSRKVGAVAGGEACMRALGFA-EHGDAKESWLLAPSAEAWNVLNAGRAQLQGALATLPAAS 299
            S P+  A+ T+R     +  R  L T  K++ NII+HP EEKYR IK++N  F +++G V+GGEA + A GF  E G   ES++L PSA+AW  L A   ++Q  L    A S
Sbjct:  126 SSPLASAMLTLRTNNNSETYRTALATADKLLSNIISHPMEEKYRSIKKSNPAFHKRLGGVSGGEALLLASGFVVESGGGVESYVLRPSADAWPRLVAAGEEIQRVLTEANATS 238
[Close]
BLAST of mRNA_S-firma_M_contig943.20412.1 vs. uniprot
Match: A0A836CLK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLK8_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 2.970e-12
Identity = 41/83 (49.40%), Postives = 55/83 (66.27%), Query Frame = 0 
Query:  217 VIDNIIAHPTEEKYRKIKRANAGFSRKVGAVAGGEACMRALGFAEHGDAKESWLLAPSAEAWNVLNAGRAQLQGALATLPAAS 299
            V DNII HP EEKYR IK++N  F+ +VG V GG A ++ALGF +     ++W+L PSA+AW  L  GR  LQ  L++L  A+
Sbjct:  201 VADNIINHPLEEKYRSIKKSNKSFAARVGNVPGGAAAIQALGFTDSPTVPDTWVLLPSADAWPTLRQGRDLLQSTLSSLGTAA 283
[Close]
BLAST of mRNA_S-firma_M_contig943.20412.1 vs. uniprot
Match: A0A448ZQX1_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQX1_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.810e-11
Identity = 48/144 (33.33%), Postives = 75/144 (52.08%), Query Frame = 0 
Query:  189 SGPMGQAVATVRA-QPAGQARDCLTTLTKVIDNIIAHPTEEKYRKIKRANAGFSRKVGAVAGGEACMRALGF---AEHGDAKESWLLAPSAEAWNVLNAGRAQLQGALATLPAASGAXXXXXXXXXXXXXXXXXXLPPPGAFPQ 328
            S P+G A+  +R+  P       + TL KV+ NI++HP EEKYR++K+ N  F +++G +AGG  CM A GF    + G+  E + L  +A++WN L   + +++ A+A   AA+G                    PPPG  P 
Sbjct:  145 SDPLGLALERLRSGNPPSVYATAVGTLGKVLGNIVSHPMEEKYRRVKKQNPAFRKRLGGLAGGHDCMLACGFRVEVDEGENAEVYKLHATADSWNALVEAKTRVEEAVAK--AAAGDRQQPVQAPGPAGLLPGGGFPPPGGLPN 286
[Close]
BLAST of mRNA_S-firma_M_contig943.20412.1 vs. uniprot
Match: A0A6G0XIW2_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIW2_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 3.710e-11
Identity = 73/214 (34.11%), Postives = 98/214 (45.79%), Query Frame = 0 
Query:   87 STVGALKDAIRSKFDVEPK--RIIFQGRILNKDDQTLQECKLKDGLTVVVQAAQPGAPSPAXXXXXXXXXXXXXXXSPAAGXXXXXXXXXXXQAIQGLGLXXXXSGP-MGQAVATVRAQPAGQARDCLTTLTKVIDNIIAHPTEEKYRKIKRANAGFSRKVGAVAGGEACMRALGFAEHGDAKESWLLAPSAEAWNVLNAGRAQLQGALATLPA 297
            +TV  LK  +++K +  P+  R+IFQGR+L+ D  TL    L  GL V +       P+PA                P A                        SGP + Q +  +RA P+G     + TLTK+ +NII +P EEKYRKI+ AN    RKV  V  G AC+RA+GFA  G      +L P+A  W  L A +  L    AT  A
Sbjct:   29 ATVLDLKLKVQAKLNYPPEAQRLIFQGRVLD-DKNTLASYSLASGLAVHLAVNTKLVPTPATATSTPP---------PVA-----------------------PSGPTLAQLLPLLRASPSGPG--AIATLTKMAENIINNPGEEKYRKIRLANEALKRKVLDVPHGMACVRAMGFAP-GVEDGHLVLVPNASNWEHLLASKRTLDQFNATAAA 206
[Close]
BLAST of mRNA_S-firma_M_contig943.20412.1 vs. uniprot
Match: A0A7S2EXK5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EXK5_TRICV)

HSP 1 Score: 74.3 bits (181), Expect = 1.990e-10
Identity = 58/156 (37.18%), Postives = 80/156 (51.28%), Query Frame = 0 
Query:  189 SGPMGQAVATVRAQ--PAGQARDCLTTLTKVIDNIIAHPTEEKYRKIKRANAGFSRKVGAVAGGEACMRALGFAEH----GDA-KESWLLAPSAEAWNVLNAGRAQLQGALATLPAASGAXXXXXXXXXXXXXXXXXXLPPPGAFPQ-PGFGGGGM 336
            S P+  A+ T+R++  PA Q +  L TL K++ N+ +HP EEKYR++K+ NA F R++G + GG   M A GF       GDA +E + L PSA+AW  L A +  +  ALA    A                      PP GA P  PG G GG+
Sbjct:  174 SDPLPAALGTIRSRCTPA-QYKTALQTLDKLLGNVKSHPMEEKYRRVKKGNAAFQRRLGGLPGGHDAMLAAGFTVEQECSGDACEEIYSLTPSADAWPKLVAAKDAVATALAEAERAQ----------------QQAAAPPVGAAPAFPGMGAGGL 312
[Close]
BLAST of mRNA_S-firma_M_contig943.20412.1 vs. uniprot
Match: A0A485L3W8_9STRA (Aste57867_15783 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L3W8_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 6.610e-10
Identity = 73/215 (33.95%), Postives = 99/215 (46.05%), Query Frame = 0 
Query:   87 STVGALKDAIRSK--FDVEPKRIIFQGRILNKDDQTLQECKLKDGLTVVVQAAQPGAPSPAXXXXXXXXXXXXXXXSPAAGXXXXXXXXXXXQAIQGLGLXXXXSGPMGQAVATVRAQPAGQARDCLTTLTKVIDNIIAHPTEEKYRKIKRANAGFSRKVGAVAGGEACMRALGFAEHGDAKESWLLAPSAEAWNVLNAGRAQLQGALATLPAAS 299
            +TV  LK  ++++  F  E +R+IFQGR+L+ D  TL    L  GLTV +       P+                 SP+A              + G     XX     Q +  +RA P G A   + TLTK+ +NI+ HPTEEKYRKI+ AN    RKV  V  G   + A+GFA  G      +L P+A  W  L A +  L    AT  AA+
Sbjct:   26 ATVSDLKQKVQAQLNFPPESQRLIFQGRVLD-DKNTLASYSLASGLTVHLAVNTKLVPATTP--------------SPSA------------VPVGGAAPSTXXXXXXIQLLPLLRASPGGPA--AIATLTKMAENIVNHPTEEKYRKIRLANEALKRKVLDVPHGTPSVLAMGFAA-GVEDGHLVLVPNAANWEHLVASKRALDQFNATSFAAA 210
[Close]
BLAST of mRNA_S-firma_M_contig943.20412.1 vs. uniprot
Match: A0A7S4EG88_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EG88_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 5.510e-9
Identity = 39/89 (43.82%), Postives = 55/89 (61.80%), Query Frame = 0 
Query:  195 AVATVRAQ-PAGQARDCLTTLTKVIDNIIAHPTEEKYRKIKRANAGFSRKVGAVAGGEACMRALGFA-EHGDAKESWLLAPSAEAWNVL 281
            A+A +R+  P       + TL KV+ NI+A+P EEKYR++KR N  F +++G + GG ACM A GF  E   A+E + L  SA+ WN L
Sbjct:  187 ALAELRSNNPPSVYATAVATLEKVLTNIVANPMEEKYRRVKRQNPAFRKRLGGLGGGHACMLACGFTVEQQAAEEVYQLRASADRWNNL 275
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig943.20412.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAX4_ECTSI1.800e-12566.25Ubiquitin-like domain-containing protein n=2 Tax=E... [more]
A0A7S2SMK3_9STRA2.150e-2135.78Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2SNT8_9STRA3.100e-2035.78Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
B8C198_THAPS1.390e-1242.48Ubiquitin-like domain-containing protein n=1 Tax=T... [more]
A0A836CLK8_9STRA2.970e-1249.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A448ZQX1_9STRA1.810e-1133.33Ubiquitin-like domain-containing protein n=1 Tax=P... [more]
A0A6G0XIW2_9STRA3.710e-1134.11Ubiquitin-like domain-containing protein n=1 Tax=A... [more]
A0A7S2EXK5_TRICV1.990e-1037.18Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A485L3W8_9STRA6.610e-1033.95Aste57867_15783 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S4EG88_9STRA5.510e-943.82Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018997PUB domainSMARTSM00580PGNneucoord: 209..273
e-value: 2.1E-10
score: 50.5
IPR018997PUB domainPFAMPF09409PUBcoord: 207..281
e-value: 3.7E-19
score: 68.4
NoneNo IPR availableGENE3D3.10.20.90coord: 43..135
e-value: 6.3E-10
score: 40.9
NoneNo IPR availableGENE3D1.20.58.2190coord: 192..290
e-value: 1.3E-20
score: 74.9
NoneNo IPR availablePANTHERPTHR10677:SF3FI07626P-RELATEDcoord: 58..179
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 80..134
e-value: 8.2E-10
score: 38.3
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 65..141
score: 13.794
IPR015496UbiquilinPANTHERPTHR10677UBIQUILINcoord: 58..179
IPR036339PUB-like domain superfamilySUPERFAMILY143503PUG domain-likecoord: 200..292
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 65..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig943contigS-firma_M_contig943:14372..17994 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig943.20412.1mRNA_S-firma_M_contig943.20412.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig943 14372..17994 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig943.20412.1 ID=prot_S-firma_M_contig943.20412.1|Name=mRNA_S-firma_M_contig943.20412.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=526bp
RKTRARHSAGSGRFRSNYYCFSRIAYSIPRCKAQLGARRLRLETQPFESA
DLDSNFSMAAAAEPATIGVKFTSSDKGAGEVALSLESTVGALKDAIRSKF
DVEPKRIIFQGRILNKDDQTLQECKLKDGLTVVVQAAQPGAPSPATPAAA
TPPTPSAATPSPAAGAAAGGGVAAAAQAIQGLGLGGGGSGPMGQAVATVR
AQPAGQARDCLTTLTKVIDNIIAHPTEEKYRKIKRANAGFSRKVGAVAGG
EACMRALGFAEHGDAKESWLLAPSAEAWNVLNAGRAQLQGALATLPAASG
APAASAGAGSGGFAGGLGVLPPPGAFPQPGFGGGGMGGMGGGMGGGAGGM
PDLATMARMAQNPAVMQGMMSDPQVQAMMRSNPQMASAMQSVMATPGGLA
GAFEMMQNNPAMAQMAQQMMQDPTALQRASQMDLGGAFAAGLNATGANPA
QGFQPPSAGLGRQGGAPFAPPPAAAAAAAAAATAPTPAPSPSPAAAGGAG
GGESEQEEKTEDELIAEAIRRSMED*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-like_domsf
IPR036339PUB-like_dom_sf
IPR015496Ubiquilin
IPR000626Ubiquitin_dom
IPR018997PUB_domain