mRNA_S-firma_M_contig943.20412.1 (mRNA) Sphaerotrichia firma Sfir_13m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_M_contig943.20412.1
Unique NamemRNA_S-firma_M_contig943.20412.1
TypemRNA
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Homology
[Close]
BLAST of mRNA_S-firma_M_contig943.20412.1 vs. uniprot
Match: D8LAX4_ECTSI (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAX4_ECTSI)

HSP 1 Score: 384 bits (985), Expect = 1.800e-125
Identity = 316/477 (66.25%), Postives = 334/477 (70.02%), Query Frame = 1 
Query:  172 MAAAAEPATIGVKFTSSDKGAGEVALSLESTVGALKDAIRSKFDVEPKRIIFQGRILNKDDQTLQECKLKDGLTVVVQAAQPGAPSPAXXXXXXXXXXXXXXX---------SPAAGXXXXXXXXXXXQAIQGLGLXXXXSGPMGQAVATVRAQPAGQARDCLTTLTKVIDNIIAHPTEEKYRKIKRANAGFSRKVGAVAGGEACMRALGFAEHGDAKESWLLAPSAEAWNVLNAGRAQLQGALATLPAASGAXXXXXXXXXXXXXXXXXXLPPPGAFPQPGFGGGGMXXXXXXXXXXXXXMPDLATMARMAQNPAVMQGMXXXXXXXXXXXXXXXXXXAMQSVMATPGGLAGAFEMXXXXXXXXXXXXXXXXXXXXXQRASQMDLGGAFAAGLNATGANPAQGFQPPSAGLGRQGGAPFAPPPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTEDELIAEAIRRSMED 1575
            ++AA+  ATIGVKFTSSDK AG+V++SLE TVG LK AIRS+FDVEPKRIIFQGRILNKDDQTLQ+CKLKDGLTVVVQ   PGA SP XXXXXXXXXXXXXXX         +PAAG           Q++ GL  X   S P+GQAVATV  QPAG AR+CLTTLTKVIDNI AHPTEEKYRKIKRANAGFSRKVGAV GGEACMRALGF EHGDA+ESWLLAPS  AWNVL AGR  +Q ALATLP A  A                  LPPPGAFPQ GFGGG               MPD+ATMARMAQNPAVMQG XXXXXXXXXXXXXXXXXX MQSVMA PGGLA AFE        XXXXXXXXXX    QRA+QMD GGA AAG+NA   N AQGFQ P                  XXXXXXXXXXXXXXXXXXXX               TEDELIAEAIRRSMED
Sbjct:    8 VSAASATATIGVKFTSSDKAAGQVSISLEGTVGELKGAIRSQFDVEPKRIIFQGRILNKDDQTLQDCKLKDGLTVVVQVLAPGA-SPXXXXXXXXXXXXXXXXXXXXSPATPNPAAGLAAAT------QSMSGLXXXAVSSSPVGQAVATVSRQPAGVARECLTTLTKVIDNIKAHPTEEKYRKIKRANAGFSRKVGAVPGGEACMRALGFVEHGDAQESWLLAPSEAAWNVLTAGRVDIQRALATLPGAPAAAGASTGGFAGGLGV----LPPPGAFPQAGFGGG----------TGGGGMPDMATMARMAQNPAVMQGXXXXXXXXXXXXXXXXXXXXMQSVMARPGGLAQAFEAIQNNPAMXXXXXXXXXXPTALQRAAQMDFGGALAAGINAAPPNAAQGFQAPXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXASEGGGEAGEEGKEMTEDELIAEAIRRSMED 459
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BLAST of mRNA_S-firma_M_contig943.20412.1 vs. uniprot
Match: A0A7S2SMK3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SMK3_9STRA)

HSP 1 Score: 103 bits (258), Expect = 2.150e-21
Identity = 83/232 (35.78%), Postives = 124/232 (53.45%), Query Frame = 1 
Query:  181 AAEPATIGVKFTSSDKGAGEVALSLESTVGALKDAIRSKFDVEP--KRIIFQGRILNKDDQTLQECKLKDGLTVVVQAAQPGAPSPAXXXXXXXXXXXXXXXSP-AAGXXXXXXXXXXXQAIQGLGLXXXXSGPMGQAVATVRAQPAGQARDCLTTLTKVIDNIIAHPTEEKYRKIKRANAGFSRKVGAVAGGEACMRALGFAEHGDAKESWLLAPSAEAWNVLNAGRAQLQ 867
            AA   T+ VK TS ++   E+ ++ + +V A K+AI++K  V+P  +R+I +G+IL KDDQ L   K+  G TV++Q  Q  A + A                P AA            QA                A+  + + P    R  L TL KVIDNII +P E+KYR+++ ANA F+RKVG++ GG  C+R +GF + G+ + + +LAPS EAW+ LN+ R  +Q
Sbjct:    2 AANEITVKVKRTSGEQMV-EMTVAPDLSVQAFKEAIQAKLGVDPAAQRLIHKGKIL-KDDQGLDVYKVATGETVLLQVTQRPAAAGATPSGTQAPVAAAAPMPPTAAAMAGTTAPTTGIQA----------------ALEELSSNPPDALRLGLETLLKVIDNIIQNPNEDKYRRLRPANATFNRKVGSLPGGLRCVREMGFTD-GEEEGTLILAPSTEAWHHLNSCRRLVQ 214
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BLAST of mRNA_S-firma_M_contig943.20412.1 vs. uniprot
Match: A0A7S2SNT8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNT8_9STRA)

HSP 1 Score: 103 bits (258), Expect = 3.100e-20
Identity = 83/232 (35.78%), Postives = 124/232 (53.45%), Query Frame = 1 
Query:  181 AAEPATIGVKFTSSDKGAGEVALSLESTVGALKDAIRSKFDVEP--KRIIFQGRILNKDDQTLQECKLKDGLTVVVQAAQPGAPSPAXXXXXXXXXXXXXXXSP-AAGXXXXXXXXXXXQAIQGLGLXXXXSGPMGQAVATVRAQPAGQARDCLTTLTKVIDNIIAHPTEEKYRKIKRANAGFSRKVGAVAGGEACMRALGFAEHGDAKESWLLAPSAEAWNVLNAGRAQLQ 867
            AA   T+ VK TS ++   E+ ++ + +V A K+AI++K  V+P  +R+I +G+IL KDDQ L   K+  G TV++Q  Q  A + A                P AA            QA                A+  + + P    R  L TL KVIDNII +P E+KYR+++ ANA F+RKVG++ GG  C+R +GF + G+ + + +LAPS EAW+ LN+ R  +Q
Sbjct:    2 AANEITVKVKRTSGEQMV-EMTVAPDLSVQAFKEAIQAKLGVDPAAQRLIHKGKIL-KDDQGLDVYKVATGETVLLQVTQRPAAAGATPSGTQAPVAAAAPMPPTAAAMAGTTAPTTGIQA----------------ALEELSSNPPDALRLGLETLLKVIDNIIQNPNEDKYRRLRPANATFNRKVGSLPGGLRCVREMGFTD-GEEEGTLILAPSTEAWHHLNSCRRLVQ 214
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BLAST of mRNA_S-firma_M_contig943.20412.1 vs. uniprot
Match: A0A836CLK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLK8_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 2.970e-12
Identity = 41/83 (49.40%), Postives = 55/83 (66.27%), Query Frame = 1 
Query:  649 VIDNIIAHPTEEKYRKIKRANAGFSRKVGAVAGGEACMRALGFAEHGDAKESWLLAPSAEAWNVLNAGRAQLQGALATLPAAS 897
            V DNII HP EEKYR IK++N  F+ +VG V GG A ++ALGF +     ++W+L PSA+AW  L  GR  LQ  L++L  A+
Sbjct:  201 VADNIINHPLEEKYRSIKKSNKSFAARVGNVPGGAAAIQALGFTDSPTVPDTWVLLPSADAWPTLRQGRDLLQSTLSSLGTAA 283
[Close]
BLAST of mRNA_S-firma_M_contig943.20412.1 vs. uniprot
Match: A0A448ZQX1_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQX1_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.810e-11
Identity = 48/144 (33.33%), Postives = 75/144 (52.08%), Query Frame = 1 
Query:  565 SGPMGQAVATVRA-QPAGQARDCLTTLTKVIDNIIAHPTEEKYRKIKRANAGFSRKVGAVAGGEACMRALGF---AEHGDAKESWLLAPSAEAWNVLNAGRAQLQGALATLPAASGAXXXXXXXXXXXXXXXXXXLPPPGAFPQ 984
            S P+G A+  +R+  P       + TL KV+ NI++HP EEKYR++K+ N  F +++G +AGG  CM A GF    + G+  E + L  +A++WN L   + +++ A+A   AA+G                    PPPG  P 
Sbjct:  145 SDPLGLALERLRSGNPPSVYATAVGTLGKVLGNIVSHPMEEKYRRVKKQNPAFRKRLGGLAGGHDCMLACGFRVEVDEGENAEVYKLHATADSWNALVEAKTRVEEAVAK--AAAGDRQQPVQAPGPAGLLPGGGFPPPGGLPN 286
[Close]
BLAST of mRNA_S-firma_M_contig943.20412.1 vs. uniprot
Match: A0A6G0XIW2_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIW2_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 3.710e-11
Identity = 73/214 (34.11%), Postives = 98/214 (45.79%), Query Frame = 1 
Query:  259 STVGALKDAIRSKFDVEPK--RIIFQGRILNKDDQTLQECKLKDGLTVVVQAAQPGAPSPAXXXXXXXXXXXXXXXSPAAGXXXXXXXXXXXQAIQGLGLXXXXSGP-MGQAVATVRAQPAGQARDCLTTLTKVIDNIIAHPTEEKYRKIKRANAGFSRKVGAVAGGEACMRALGFAEHGDAKESWLLAPSAEAWNVLNAGRAQLQGALATLPA 891
            +TV  LK  +++K +  P+  R+IFQGR+L+ D  TL    L  GL V +       P+PA                P A                        SGP + Q +  +RA P+G     + TLTK+ +NII +P EEKYRKI+ AN    RKV  V  G AC+RA+GFA  G      +L P+A  W  L A +  L    AT  A
Sbjct:   29 ATVLDLKLKVQAKLNYPPEAQRLIFQGRVLD-DKNTLASYSLASGLAVHLAVNTKLVPTPATATSTPP---------PVA-----------------------PSGPTLAQLLPLLRASPSGPG--AIATLTKMAENIINNPGEEKYRKIRLANEALKRKVLDVPHGMACVRAMGFAP-GVEDGHLVLVPNASNWEHLLASKRTLDQFNATAAA 206
[Close]
BLAST of mRNA_S-firma_M_contig943.20412.1 vs. uniprot
Match: A0A7S2EXK5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EXK5_TRICV)

HSP 1 Score: 74.3 bits (181), Expect = 1.990e-10
Identity = 58/156 (37.18%), Postives = 80/156 (51.28%), Query Frame = 1 
Query:  565 SGPMGQAVATVRAQ--PAGQARDCLTTLTKVIDNIIAHPTEEKYRKIKRANAGFSRKVGAVAGGEACMRALGFAEH----GDA-KESWLLAPSAEAWNVLNAGRAQLQGALATLPAASGAXXXXXXXXXXXXXXXXXXLPPPGAFPQ-PGFGGGGM 1008
            S P+  A+ T+R++  PA Q +  L TL K++ N+ +HP EEKYR++K+ NA F R++G + GG   M A GF       GDA +E + L PSA+AW  L A +  +  ALA    A                      PP GA P  PG G GG+
Sbjct:  174 SDPLPAALGTIRSRCTPA-QYKTALQTLDKLLGNVKSHPMEEKYRRVKKGNAAFQRRLGGLPGGHDAMLAAGFTVEQECSGDACEEIYSLTPSADAWPKLVAAKDAVATALAEAERAQ----------------QQAAAPPVGAAPAFPGMGAGGL 312
[Close]
BLAST of mRNA_S-firma_M_contig943.20412.1 vs. uniprot
Match: A0A485L3W8_9STRA (Aste57867_15783 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L3W8_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 6.610e-10
Identity = 73/215 (33.95%), Postives = 99/215 (46.05%), Query Frame = 1 
Query:  259 STVGALKDAIRSK--FDVEPKRIIFQGRILNKDDQTLQECKLKDGLTVVVQAAQPGAPSPAXXXXXXXXXXXXXXXSPAAGXXXXXXXXXXXQAIQGLGLXXXXSGPMGQAVATVRAQPAGQARDCLTTLTKVIDNIIAHPTEEKYRKIKRANAGFSRKVGAVAGGEACMRALGFAEHGDAKESWLLAPSAEAWNVLNAGRAQLQGALATLPAAS 897
            +TV  LK  ++++  F  E +R+IFQGR+L+ D  TL    L  GLTV +       P+                 SP+A              + G     XX     Q +  +RA P G A   + TLTK+ +NI+ HPTEEKYRKI+ AN    RKV  V  G   + A+GFA  G      +L P+A  W  L A +  L    AT  AA+
Sbjct:   26 ATVSDLKQKVQAQLNFPPESQRLIFQGRVLD-DKNTLASYSLASGLTVHLAVNTKLVPATTP--------------SPSA------------VPVGGAAPSTXXXXXXIQLLPLLRASPGGPA--AIATLTKMAENIVNHPTEEKYRKIRLANEALKRKVLDVPHGTPSVLAMGFAA-GVEDGHLVLVPNAANWEHLVASKRALDQFNATSFAAA 210
[Close]
BLAST of mRNA_S-firma_M_contig943.20412.1 vs. uniprot
Match: A0A7S4EG88_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EG88_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 5.510e-9
Identity = 39/89 (43.82%), Postives = 55/89 (61.80%), Query Frame = 1 
Query:  583 AVATVRAQ-PAGQARDCLTTLTKVIDNIIAHPTEEKYRKIKRANAGFSRKVGAVAGGEACMRALGFA-EHGDAKESWLLAPSAEAWNVL 843
            A+A +R+  P       + TL KV+ NI+A+P EEKYR++KR N  F +++G + GG ACM A GF  E   A+E + L  SA+ WN L
Sbjct:  187 ALAELRSNNPPSVYATAVATLEKVLTNIVANPMEEKYRRVKRQNPAFRKRLGGLGGGHACMLACGFTVEQQAAEEVYQLRASADRWNNL 275
[Close]
BLAST of mRNA_S-firma_M_contig943.20412.1 vs. uniprot
Match: A0A1V9Z472_9STRA (Ubiquitin family protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z472_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.460e-8
Identity = 62/197 (31.47%), Postives = 89/197 (45.18%), Query Frame = 1 
Query:  307 EPKRIIFQGRILNKDDQTLQECKLKDGLTVVVQAAQPGAPSPAXXXXXXXXXXXXXXXSPAAGXXXXXXXXXXXQAIQGLGLXXXXSGPMGQAVATVRAQPAGQARDCLTTLTKVIDNIIAHPTEEKYRKIKRANAGFSRKVGAVAGGEACMRALGFAEHGDAKESWLLAPSAEAWNVLNAGRAQLQGALATLPAAS 897
            E +R+IFQGR+L+ +  TL    L DGLTV +       P+                 +PA                           P+   +  ++  PAG A   L TL K+ +NI+ HP+EEKYRKI+ AN    +KV  V  G AC+ A+GFA  G  +   +L P+A  W  L A +  L    A+ PA++
Sbjct:   40 EAQRLIFQGRVLD-EKATLASYSLADGLTVHLAINTKLMPAAVPAPTTTPASVAASIPTPAT-----------------------PVSPLVTLLPLLKQTPAGIA--ALGTLRKMAENIVNHPSEEKYRKIRVANEALKKKVLDVPHGLACVHAMGFAP-GVEEGHLVLVPTAANWEQLVAAKRLLD--QASTPASA 207
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig943.20412.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAX4_ECTSI1.800e-12566.25Ubiquitin-like domain-containing protein n=2 Tax=E... [more]
A0A7S2SMK3_9STRA2.150e-2135.78Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2SNT8_9STRA3.100e-2035.78Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A836CLK8_9STRA2.970e-1249.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A448ZQX1_9STRA1.810e-1133.33Ubiquitin-like domain-containing protein n=1 Tax=P... [more]
A0A6G0XIW2_9STRA3.710e-1134.11Ubiquitin-like domain-containing protein n=1 Tax=A... [more]
A0A7S2EXK5_TRICV1.990e-1037.18Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A485L3W8_9STRA6.610e-1033.95Aste57867_15783 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S4EG88_9STRA5.510e-943.82Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A1V9Z472_9STRA1.460e-831.47Ubiquitin family protein n=1 Tax=Achlya hypogyna T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig943contigS-firma_M_contig943:14372..17994 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score389.0
Seed ortholog evalue3.4e-105
Seed eggNOG ortholog2880.D8LAX4
KEGG koko:K04523
KEGG Pathwayko04141,map04141
GOsGO:0000226,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0016043,GO:0019538,GO:0019941,GO:0022402,GO:0022607,GO:0030163,GO:0030433,GO:0030474,GO:0030674,GO:0031023,GO:0032446,GO:0033554,GO:0034976,GO:0036211,GO:0036503,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043632,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0050896,GO:0051300,GO:0051603,GO:0051716,GO:0060090,GO:0070647,GO:0071704,GO:0071840,GO:1901564,GO:1901565,GO:1901575,GO:1901698
EggNOG free text desc.ubiquitin
EggNOG OGsCOG5272@1,KOG0010@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03051,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPUG domain
Ec32 orthologEc-27_006090.1
Exons4
Model size1579
Cds size1578
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig943.20412.1prot_S-firma_M_contig943.20412.1Sphaerotrichia firma Sfir_13m malepolypeptideS-firma_M_contig943 14372..17994 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828776.3338525-CDS-S-firma_M_contig943:14371..147791622828776.3338525-CDS-S-firma_M_contig943:14371..14779Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig943 14372..14779 -
1697105155.4592643-CDS-S-firma_M_contig943:14371..147791697105155.4592643-CDS-S-firma_M_contig943:14371..14779Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig943 14372..14779 -
1622828776.3519344-CDS-S-firma_M_contig943:15117..155581622828776.3519344-CDS-S-firma_M_contig943:15117..15558Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig943 15118..15558 -
1697105155.4737504-CDS-S-firma_M_contig943:15117..155581697105155.4737504-CDS-S-firma_M_contig943:15117..15558Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig943 15118..15558 -
1622828776.363791-CDS-S-firma_M_contig943:16079..165181622828776.363791-CDS-S-firma_M_contig943:16079..16518Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig943 16080..16518 -
1697105155.4911246-CDS-S-firma_M_contig943:16079..165181697105155.4911246-CDS-S-firma_M_contig943:16079..16518Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig943 16080..16518 -
1622828776.3757963-CDS-S-firma_M_contig943:17704..179941622828776.3757963-CDS-S-firma_M_contig943:17704..17994Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig943 17705..17994 -
1697105155.503736-CDS-S-firma_M_contig943:17704..179941697105155.503736-CDS-S-firma_M_contig943:17704..17994Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig943 17705..17994 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_M_contig943.20412.1

>prot_S-firma_M_contig943.20412.1 ID=prot_S-firma_M_contig943.20412.1|Name=mRNA_S-firma_M_contig943.20412.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=526bp
RKTRARHSAGSGRFRSNYYCFSRIAYSIPRCKAQLGARRLRLETQPFESA
DLDSNFSMAAAAEPATIGVKFTSSDKGAGEVALSLESTVGALKDAIRSKF
DVEPKRIIFQGRILNKDDQTLQECKLKDGLTVVVQAAQPGAPSPATPAAA
TPPTPSAATPSPAAGAAAGGGVAAAAQAIQGLGLGGGGSGPMGQAVATVR
AQPAGQARDCLTTLTKVIDNIIAHPTEEKYRKIKRANAGFSRKVGAVAGG
EACMRALGFAEHGDAKESWLLAPSAEAWNVLNAGRAQLQGALATLPAASG
APAASAGAGSGGFAGGLGVLPPPGAFPQPGFGGGGMGGMGGGMGGGAGGM
PDLATMARMAQNPAVMQGMMSDPQVQAMMRSNPQMASAMQSVMATPGGLA
GAFEMMQNNPAMAQMAQQMMQDPTALQRASQMDLGGAFAAGLNATGANPA
QGFQPPSAGLGRQGGAPFAPPPAAAAAAAAAATAPTPAPSPSPAAAGGAG
GGESEQEEKTEDELIAEAIRRSMED*
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mRNA from alignment at S-firma_M_contig943:14372..17994-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_M_contig943.20412.1 ID=mRNA_S-firma_M_contig943.20412.1|Name=mRNA_S-firma_M_contig943.20412.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=3623bp|location=Sequence derived from alignment at S-firma_M_contig943:14372..17994- (Sphaerotrichia firma Sfir_13m male)
CGCAAGACACGTGCGCGCCACAGCGCCGGGAGCGGGAGGTTCAGGAGCAA
CTATTACTGTTTCTCAAGGATCGCCTACAGTATCCCACGTTGTAAAGCGC
AACTAGGTGCGCGGCGTTTGAGACTAGAGACACAACCCTTCGAGTCAGCA
GATTTAGATTCCAACTTTTCGATGGCGGCAGCGGCGGAACCCGCAACAAT
CGGGGTGAAGTTCACATCTTCGGATAAAGGTGCTGGCGAGGTGGCGCTTT
CCCTGGAGAGCACCGTGGGCGCGCTGAAGGATGCCATTCGGTGAGCTCGG
AAGTCAAAGATAGGGCAAGCGAGAGAGATAGAAGAGAAGAGAAGAGAAGA
CGTACAAGCGTACAAGACGTGTGAAATCGACGCTGCAATGATCCTGTCAT
TCGTCCCGCTTCCCGAAGAGCCGAAGAGGCCTTGGGGGGGCGGCTAACGC
GCACGCGCTACATGCTATTGCACAACGACACAAGACTGATCGTGACTGCC
TAGAGTCGTTATCGACCAACTCGTACTACGTGCTACTTTCAAACAATGGG
AAGCATTCCTGCTGACCAAAACACTGGTATCATAGTCTATGTCAAAAGGT
CACGTGTCATCATCCCGCACTGGCATGTAAGAGAGAGTTCCACAGAGCTC
TTGTTTTTGCAAGAGATTCGTTCGGTGTGCGCGAAAGAGGTGCAACGGAT
GTCGAATCTACGATTACTGGCCTTCTCCCGTTCTACATCAGTACGGCGGG
CGCGCTGCGGCCTTGTGTGGCAACGGCGACCAAAGAGGTTTGACGTTTGA
CAGGATTGCTGGGTTGCCACCCATGGTCGGACCAGCACAGAGTTGCCCCT
CACCTCCTTTCGCCTTCGGCCAAGCTCCACCTGTGCGCTACAAGAACTAC
AAACGAGACAGCAAAACATGCAGTAGTTACCTCCTTCATTAATCCTCCTT
GCACTAGATGCCCGAGATGGGGGCAACTCGTAGACACACTGGCTTTGGTC
AGAGAAATTTGGAGTTGGCGACACGATCATCAAACCCCACGACCTCGACA
TGTTCGAATTCCAACCGCTTTTATGCGCCTTGGCTCGATCGATGTGTCTG
CCAAGTACCCACAGCAATTACCCTACCAAACACGCGTCTCCTGTGGCAGA
ACCCTTGTGTGGGTAAGCCCCAGCGATTGAAGGTGGCGTACATACGTACG
TGGGTACACCATGGAGAAAGGGATGAGCGTCCCCACGTATGTATGACCAC
GTCAACCTTTGTTTCATTTTGGGATTCCAATAGAATCAGGTGGGATTGTC
GTAAACCCTCGATCAAGACGCTGGCAACTGACCGCAACGACCTTTTGTTG
TTTTGAGAGTTTCCTGCGTCCTCAACCTGTGGTATTCCAACGTAACAACG
TATTCCCCCCCCCCCATGGTACCCATGCTTTGCTGCCTAACCGTCTCCTG
TTTCACCCCGGGGCCAACACCAACAGATCAAAGTTCGACGTGGAACCGAA
GCGCATCATCTTTCAGGGGCGCATCCTCAACAAGGACGACCAGACCCTCC
AAGAATGCAAGCTCAAAGACGGCCTAACCGTCGTCGTCCAAGCCGCGCAG
CCGGGGGCCCCGTCACCTGCAACCCCAGCAGCGGCGACCCCCCCAACACC
TTCAGCGGCCACACCGAGCCCCGCCGCCGGCGCTGCTGCCGGTGGTGGCG
TGGCGGCTGCCGCACAGGCTATTCAAGGCTTGGGTTTGGGAGGGGGGGGG
AGCGGTCCCATGGGGCAGGCGGTGGCGACGGTGCGCGCGCAGCCCGCGGG
GCAGGCGCGCGATTGCCTGACGACATTGACGAAGGTGATCGACAACATCA
TCGCGCACCCGACGGAGGAGAAGTACAGGAAGATCAAGAGAGCCAACGCT
GGGTTCAGTCGAAAGGTGATGAGGGCTGTTCCGTGGGACGGGTCGTGTGT
CGCTGGCCGTCGCTAAGGTTGCTTGCTTAGCCTGTTGGTTGGGGGTTAGC
GGTATCTAGCGTTGTGATACAAGTACCTTTGGGTTGTCTTGGAAGAGTTT
CGTTCCTGTCGGGGGATCTTTTTCCACCGTGGCTGGTGTCCAATACCCTC
CTACAGCAGTAGTGTGCCACGCAAGCTACGCAAACTACGGCGTACCGCTC
TAACCACGGCCGAAGTGGCATGTATATCCGGGATGTGTAGAAGAGGACAC
ATGCTGGAAATTTCATGGCTCCAAGTGAAGGCGTCAAATAAAATTTAATA
CGACCGCAAGACCCCTGATCCTGTTGCAATCGCCAAAAGGTTTAGGCTCA
GCTTGACTGCTGTGCTCCAAACTCCGAAACTGCGTGCTCATGCAGATAGC
AGCCCGATCAGACTATCAACGATTTTTCGCCGCGTCCCGCTAAATTCGGC
CTGCACCCGCAACACAAACACCAACGAAACGACCAGGTTGGCGCGGTAGC
AGGGGGAGAGGCGTGCATGCGAGCTCTCGGTTTCGCCGAGCACGGCGACG
CGAAGGAGAGCTGGCTCCTAGCCCCCAGCGCCGAGGCCTGGAACGTCCTC
AACGCCGGCCGCGCGCAATTACAGGGCGCTCTGGCGACCCTCCCCGCCGC
GTCCGGAGCGCCGGCTGCCAGCGCGGGAGCGGGAAGTGGCGGTTTTGCGG
GGGGGCTGGGGGTTCTTCCCCCCCCCGGGGCGTTCCCTCAGCCAGGGTTC
GGCGGGGGTGGCATGGGAGGGATGGGTGGCGGCATGGGCGGAGGGGCGGG
CGGGATGCCCGACTTGGCGACGATGGCGAGGATGGCGCAGAACCCTGCGG
TGATGCAGGGGATGATGAGCGACCCGCAAGTGCAGGCGATGATGAGGAGC
AACCCGCAGATGGCGTCGGCGATGCAGGTGTGTGGGTGTTGGTGCAGGGC
GCGAATTTGTGTGTAGTGCCTCTATGGTCGTGGGTATCGCGAAAAAAGAT
GCGCGTGTCGCGTGAGGCTGGTTCCCTTGGACTTACGAACGCTTCGGAGT
GCTTGCTGTCCTTCCTCGTATGTATGTGTTGCGTGCTCTCTTCTCTGTCT
CTCGTTCGCTCTTTTGACGTTCCCCCCTCTTGTTTCGAGGTCTTCGTCTG
CTTGAGCTTGCTCCATCACCCACCCCGCTTTGGCGCGACCCCCCCGCGCC
CTGACCGAACCTACCATCAAGTACACACTCCTCCCCGTCCCCACCCCTCC
CTTTCGCACCCGCAGTCGGTGATGGCCACCCCAGGGGGACTAGCCGGCGC
GTTCGAGATGATGCAAAACAACCCGGCGATGGCGCAGATGGCGCAGCAGA
TGATGCAAGACCCGACCGCCCTCCAGCGGGCCTCCCAGATGGACCTCGGA
GGCGCCTTCGCCGCGGGGTTGAACGCGACAGGGGCCAACCCCGCTCAGGG
TTTCCAACCACCTTCCGCGGGCTTGGGTAGGCAGGGGGGTGCGCCCTTTG
CGCCGCCCCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTACGGCACCC
ACACCAGCGCCATCGCCGTCCCCTGCTGCTGCAGGAGGCGCAGGTGGGGG
GGAGAGCGAGCAGGAGGAGAAGACTGAAGACGAGCTGATCGCGGAGGCCA
TTCGACGATCGATGGAGGACTAG
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Coding sequence (CDS) from alignment at S-firma_M_contig943:14372..17994-

>mRNA_S-firma_M_contig943.20412.1 ID=mRNA_S-firma_M_contig943.20412.1|Name=mRNA_S-firma_M_contig943.20412.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=3156bp|location=Sequence derived from alignment at S-firma_M_contig943:14372..17994- (Sphaerotrichia firma Sfir_13m male)
CGCAAGACACGTGCGCGCCACAGCGCCGGGAGCGGGAGGTTCAGGAGCAA
CTATTACTGTTTCTCAAGGATCGCCTACAGTATCCCACGTTGTAAAGCGC
AACTAGGTGCGCGGCGTTTGAGACTAGAGACACAACCCTTCGAGTCAGCA
GATTTAGATTCCAACTTTTCGATGGCGGCAGCGGCGGAACCCGCAACAAT
CGGGGTGAAGTTCACATCTTCGGATAAAGGTGCTGGCGAGGTGGCGCTTT
CCCTGGAGAGCACCGTGGGCGCGCTGAAGGATGCCATTCGCGCAAGACAC
GTGCGCGCCACAGCGCCGGGAGCGGGAGGTTCAGGAGCAACTATTACTGT
TTCTCAAGGATCGCCTACAGTATCCCACGTTGTAAAGCGCAACTAGGTGC
GCGGCGTTTGAGACTAGAGACACAACCCTTCGAGTCAGCAGATTTAGATT
CCAACTTTTCGATGGCGGCAGCGGCGGAACCCGCAACAATCGGGGTGAAG
TTCACATCTTCGGATAAAGGTGCTGGCGAGGTGGCGCTTTCCCTGGAGAG
CACCGTGGGCGCGCTGAAGGATGCCATTCGATCAAAGTTCGACGTGGAAC
CGAAGCGCATCATCTTTCAGGGGCGCATCCTCAACAAGGACGACCAGACC
CTCCAAGAATGCAAGCTCAAAGACGGCCTAACCGTCGTCGTCCAAGCCGC
GCAGCCGGGGGCCCCGTCACCTGCAACCCCAGCAGCGGCGACCCCCCCAA
CACCTTCAGCGGCCACACCGAGCCCCGCCGCCGGCGCTGCTGCCGGTGGT
GGCGTGGCGGCTGCCGCACAGGCTATTCAAGGCTTGGGTTTGGGAGGGGG
GGGGAGCGGTCCCATGGGGCAGGCGGTGGCGACGGTGCGCGCGCAGCCCG
CGGGGCAGGCGCGCGATTGCCTGACGACATTGACGAAGGTGATCGACAAC
ATCATCGCGCACCCGACGGAGGAGAAGTACAGGAAGATCAAGAGAGCCAA
CGCTGGGTTCAGTCGAAAGATCAAAGTTCGACGTGGAACCGAAGCGCATC
ATCTTTCAGGGGCGCATCCTCAACAAGGACGACCAGACCCTCCAAGAATG
CAAGCTCAAAGACGGCCTAACCGTCGTCGTCCAAGCCGCGCAGCCGGGGG
CCCCGTCACCTGCAACCCCAGCAGCGGCGACCCCCCCAACACCTTCAGCG
GCCACACCGAGCCCCGCCGCCGGCGCTGCTGCCGGTGGTGGCGTGGCGGC
TGCCGCACAGGCTATTCAAGGCTTGGGTTTGGGAGGGGGGGGGAGCGGTC
CCATGGGGCAGGCGGTGGCGACGGTGCGCGCGCAGCCCGCGGGGCAGGCG
CGCGATTGCCTGACGACATTGACGAAGGTGATCGACAACATCATCGCGCA
CCCGACGGAGGAGAAGTACAGGAAGATCAAGAGAGCCAACGCTGGGTTCA
GTCGAAAGGTTGGCGCGGTAGCAGGGGGAGAGGCGTGCATGCGAGCTCTC
GGTTTCGCCGAGCACGGCGACGCGAAGGAGAGCTGGCTCCTAGCCCCCAG
CGCCGAGGCCTGGAACGTCCTCAACGCCGGCCGCGCGCAATTACAGGGCG
CTCTGGCGACCCTCCCCGCCGCGTCCGGAGCGCCGGCTGCCAGCGCGGGA
GCGGGAAGTGGCGGTTTTGCGGGGGGGCTGGGGGTTCTTCCCCCCCCCGG
GGCGTTCCCTCAGCCAGGGTTCGGCGGGGGTGGCATGGGAGGGATGGGTG
GCGGCATGGGCGGAGGGGCGGGCGGGATGCCCGACTTGGCGACGATGGCG
AGGATGGCGCAGAACCCTGCGGTGATGCAGGGGATGATGAGCGACCCGCA
AGTGCAGGCGATGATGAGGAGCAACCCGCAGATGGCGTCGGCGATGCAGG
TTGGCGCGGTAGCAGGGGGAGAGGCGTGCATGCGAGCTCTCGGTTTCGCC
GAGCACGGCGACGCGAAGGAGAGCTGGCTCCTAGCCCCCAGCGCCGAGGC
CTGGAACGTCCTCAACGCCGGCCGCGCGCAATTACAGGGCGCTCTGGCGA
CCCTCCCCGCCGCGTCCGGAGCGCCGGCTGCCAGCGCGGGAGCGGGAAGT
GGCGGTTTTGCGGGGGGGCTGGGGGTTCTTCCCCCCCCCGGGGCGTTCCC
TCAGCCAGGGTTCGGCGGGGGTGGCATGGGAGGGATGGGTGGCGGCATGG
GCGGAGGGGCGGGCGGGATGCCCGACTTGGCGACGATGGCGAGGATGGCG
CAGAACCCTGCGGTGATGCAGGGGATGATGAGCGACCCGCAAGTGCAGGC
GATGATGAGGAGCAACCCGCAGATGGCGTCGGCGATGCAGTCGGTGATGG
CCACCCCAGGGGGACTAGCCGGCGCGTTCGAGATGATGCAAAACAACCCG
GCGATGGCGCAGATGGCGCAGCAGATGATGCAAGACCCGACCGCCCTCCA
GCGGGCCTCCCAGATGGACCTCGGAGGCGCCTTCGCCGCGGGGTTGAACG
CGACAGGGGCCAACCCCGCTCAGGGTTTCCAACCACCTTCCGCGGGCTTG
GGTAGGCAGGGGGGTGCGCCCTTTGCGCCGCCCCCTGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCTACGGCACCCACACCAGCGCCATCGCCGTCCCCTG
CTGCTGCAGGAGGCGCAGGTGGGGGGGAGAGCGAGCAGGAGGAGAAGACT
GAAGACGAGCTGATCGCGGAGGCCATTCGACGATCGATGGAGGACTAGTC
GGTGATGGCCACCCCAGGGGGACTAGCCGGCGCGTTCGAGATGATGCAAA
ACAACCCGGCGATGGCGCAGATGGCGCAGCAGATGATGCAAGACCCGACC
GCCCTCCAGCGGGCCTCCCAGATGGACCTCGGAGGCGCCTTCGCCGCGGG
GTTGAACGCGACAGGGGCCAACCCCGCTCAGGGTTTCCAACCACCTTCCG
CGGGCTTGGGTAGGCAGGGGGGTGCGCCCTTTGCGCCGCCCCCTGCTGCT
GCTGCTGCTGCTGCTGCTGCTGCTACGGCACCCACACCAGCGCCATCGCC
GTCCCCTGCTGCTGCAGGAGGCGCAGGTGGGGGGGAGAGCGAGCAGGAGG
AGAAGACTGAAGACGAGCTGATCGCGGAGGCCATTCGACGATCGATGGAG
GACTAG
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