prot_S-firma_M_contig9389.20362.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9389.20362.1
Unique Nameprot_S-firma_M_contig9389.20362.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length61
Homology
BLAST of mRNA_S-firma_M_contig9389.20362.1 vs. uniprot
Match: D7G3C2_ECTSI (F-box domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C2_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 2.610e-21
Identity = 42/57 (73.68%), Postives = 49/57 (85.96%), Query Frame = 0
Query:    5 QEQLGEVLHVLEGHKERITGVARLDGGRLVSCSVDGTLRVWDIETGETRHELLLPSP 61
            +EQLGE LHVLEGH ERITGVARLDG RL + S DG+LRVWD+ +GET H++LLPSP
Sbjct:   40 KEQLGECLHVLEGHTERITGVARLDGSRLATSSADGSLRVWDVSSGETLHDVLLPSP 96          
BLAST of mRNA_S-firma_M_contig9389.20362.1 vs. uniprot
Match: A0A6H5KY61_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY61_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 2.550e-20
Identity = 41/57 (71.93%), Postives = 49/57 (85.96%), Query Frame = 0
Query:    5 QEQLGEVLHVLEGHKERITGVARLDGGRLVSCSVDGTLRVWDIETGETRHELLLPSP 61
            +EQLGE LHVLEGH +RITGVARLDG RL + S DG+LRVWD+ +GET H++LLPSP
Sbjct:  263 KEQLGECLHVLEGHTQRITGVARLDGSRLATSSADGSLRVWDVSSGETLHDVLLPSP 319          
BLAST of mRNA_S-firma_M_contig9389.20362.1 vs. uniprot
Match: A0A0C3D5Y3_9PEZI (Uncharacterized protein n=1 Tax=Oidiodendron maius Zn TaxID=913774 RepID=A0A0C3D5Y3_9PEZI)

HSP 1 Score: 55.1 bits (131), Expect = 2.750e-7
Identity = 21/46 (45.65%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    4 FQEQLGEVLHVLEGHKERITGVARLDGGRLVSCSVDGTLRVWDIET 49
            + +  G++ HV +GH + +TG+  L  GR+VS S+DGTLRVW++ T
Sbjct:  302 WDQSTGKLRHVYDGHYDEVTGIVALPDGRIVSVSIDGTLRVWEMST 347          
BLAST of mRNA_S-firma_M_contig9389.20362.1 vs. uniprot
Match: A0A165I651_EXIGL (WD40 repeat-like protein n=1 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165I651_EXIGL)

HSP 1 Score: 53.9 bits (128), Expect = 7.160e-7
Identity = 27/44 (61.36%), Postives = 30/44 (68.18%), Query Frame = 0
Query:    9 GEVLHVLEGHKERITGVARLDGGRLVSCSVDGTLRVWDIETGET 52
            GE+L  L GH   +T V  L  GRLVS S D TLR+WDIETGET
Sbjct:   14 GELLPPLRGHVAGVTSVTFLADGRLVSASKDMTLRIWDIETGET 57          
BLAST of mRNA_S-firma_M_contig9389.20362.1 vs. uniprot
Match: A0A0D0BC11_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Suillus luteus UH-Slu-Lm8-n1 TaxID=930992 RepID=A0A0D0BC11_9AGAM)

HSP 1 Score: 53.1 bits (126), Expect = 1.230e-6
Identity = 21/36 (58.33%), Postives = 29/36 (80.56%), Query Frame = 0
Query:   15 LEGHKERITGVARLDGGRLVSCSVDGTLRVWDIETG 50
            L GH  ++ GVA L GGR+V+CS DG+LR+WD+E+G
Sbjct:    2 LRGHTHQVRGVAHLPGGRIVTCSDDGSLRLWDLESG 37          
BLAST of mRNA_S-firma_M_contig9389.20362.1 vs. uniprot
Match: A0A165JMQ9_EXIGL (WD40 repeat-like protein n=1 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165JMQ9_EXIGL)

HSP 1 Score: 52.8 bits (125), Expect = 1.840e-6
Identity = 27/45 (60.00%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    9 GEVLHVLEGHKERITGVARL-DGGRLVSCSVDGTLRVWDIETGET 52
            G  LH L GH+  +  VA L DG RLVS S DGTLR+WD+ETG+T
Sbjct:  591 GPRLHSLLGHEHPVYSVAFLPDGSRLVSSSGDGTLRIWDVETGKT 635          
BLAST of mRNA_S-firma_M_contig9389.20362.1 vs. uniprot
Match: A0A6A5ZHA6_9PLEO (WD repeat protein n=1 Tax=Lophiotrema nucula TaxID=690887 RepID=A0A6A5ZHA6_9PLEO)

HSP 1 Score: 52.4 bits (124), Expect = 2.470e-6
Identity = 21/48 (43.75%), Postives = 34/48 (70.83%), Query Frame = 0
Query:    1 LRRFQEQLGEVLHVLEGHKERITGVARLDGGRLVSCSVDGTLRVWDIE 48
            +R F +  G+++HV  GH E +TG+  LDG ++VS S+DGT+R W ++
Sbjct:  295 VRVFDKGTGKLVHVFSGHYEEVTGLVLLDGQKVVSVSIDGTVRQWSLK 342          
BLAST of mRNA_S-firma_M_contig9389.20362.1 vs. uniprot
Match: L8GIR5_ACACA (COP1, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GIR5_ACACA)

HSP 1 Score: 52.0 bits (123), Expect = 3.420e-6
Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    8 LGEVLHVLEGHKERITGVARLDGGRLVSCSVDGTLRVWDIETGET 52
            L E L VL GH + ++ +  LD  RLVS S+DGTLR+WD+ T E+
Sbjct:  462 LREPLFVLRGHDKAVSHIQFLDSSRLVSASIDGTLRLWDVNTAES 506          
BLAST of mRNA_S-firma_M_contig9389.20362.1 vs. uniprot
Match: A0A2D8YX99_9PROT (Cytochrome c domain-containing protein n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A2D8YX99_9PROT)

HSP 1 Score: 51.2 bits (121), Expect = 6.360e-6
Identity = 24/45 (53.33%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    9 GEVLHVLEGHKERITGVARLDGG-RLVSCSVDGTLRVWDIETGET 52
            G +  VLEGH++ IT +  L GG RL++ S+D TLRVWD+++GET
Sbjct:  208 GRLQRVLEGHRQGITKMNTLPGGARLLTASIDRTLRVWDVKSGET 252          
BLAST of mRNA_S-firma_M_contig9389.20362.1 vs. uniprot
Match: A0A7C3YLQ9_9BACT (TIR domain-containing protein (Fragment) n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A7C3YLQ9_9BACT)

HSP 1 Score: 51.2 bits (121), Expect = 6.460e-6
Identity = 25/44 (56.82%), Postives = 31/44 (70.45%), Query Frame = 0
Query:    9 GEVLHVLEGHKERITGVA-RLDGGRLVSCSVDGTLRVWDIETGE 51
            G +L+ LEGH   +T VA   DG R VS S DGTL++WD+ETGE
Sbjct:  735 GSLLYTLEGHTSEVTLVALSRDGKRAVSASRDGTLKIWDMETGE 778          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9389.20362.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3C2_ECTSI2.610e-2173.68F-box domain containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KY61_9PHAE2.550e-2071.93Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A0C3D5Y3_9PEZI2.750e-745.65Uncharacterized protein n=1 Tax=Oidiodendron maius... [more]
A0A165I651_EXIGL7.160e-761.36WD40 repeat-like protein n=1 Tax=Exidia glandulosa... [more]
A0A0D0BC11_9AGAM1.230e-658.33Uncharacterized protein (Fragment) n=1 Tax=Suillus... [more]
A0A165JMQ9_EXIGL1.840e-660.00WD40 repeat-like protein n=1 Tax=Exidia glandulosa... [more]
A0A6A5ZHA6_9PLEO2.470e-643.75WD repeat protein n=1 Tax=Lophiotrema nucula TaxID... [more]
L8GIR5_ACACA3.420e-651.11COP1, putative n=1 Tax=Acanthamoeba castellanii st... [more]
A0A2D8YX99_9PROT6.360e-653.33Cytochrome c domain-containing protein n=2 Tax=Rho... [more]
A0A7C3YLQ9_9BACT6.460e-656.82TIR domain-containing protein (Fragment) n=1 Tax=C... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 8..46
e-value: 2.8E-7
score: 40.2
IPR001680WD40 repeatPFAMPF00400WD40coord: 9..46
e-value: 4.2E-8
score: 33.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 15..55
score: 12.38
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 3..57
e-value: 1.8E-13
score: 52.1
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 33..47
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 15..55
score: 11.629
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 9..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9389contigS-firma_M_contig9389:434..616 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9389.20362.1mRNA_S-firma_M_contig9389.20362.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9389 434..616 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9389.20362.1 ID=prot_S-firma_M_contig9389.20362.1|Name=mRNA_S-firma_M_contig9389.20362.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=61bp
LRRFQEQLGEVLHVLEGHKERITGVARLDGGRLVSCSVDGTLRVWDIETG
ETRHELLLPSP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat