prot_S-firma_M_contig934.20307.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig934.20307.1
Unique Nameprot_S-firma_M_contig934.20307.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length305
Homology
BLAST of mRNA_S-firma_M_contig934.20307.1 vs. uniprot
Match: A0A6H5KGW7_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGW7_9PHAE)

HSP 1 Score: 371 bits (953), Expect = 4.480e-121
Identity = 201/304 (66.12%), Postives = 227/304 (74.67%), Query Frame = 0
Query:   13 MMMGEDEEQYAEEPQIPSSLNLPLLSRNDATWKEF-GADLIADAALRGEWKDDNTRALLWRLLLGVIPGGSPPSEWATEMANKRAQHRRLAAEHRVDIVN-------MSANPLLPGSGSGDDPWNHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEAXXXXXXXXXXXXXXXXXXXXXXXXGEATESRST---------TSSWLGTSMVNGAPMDAATHPGAAAILGRGSTPQDLEADAFWLFSAVMTGLEGFYEHGTNNASSS 299
            MMM E EE+   +P+  ++L LPLLSR++ TW++F GA+++AD A RGEW DDN+R LLWRLLLGV+P  SPPSEWATEMANKR ++RRL AEHRVDI         MSANPL  GSGSGDDPW+HFY+RKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLS+WADLNT TAYRQGMHEVLAPLIL LEKE               XXXXXXXXXX                   S W+G S+VNG P++A THP  AAILG GSTP+DLEADAFWLFSAVM+GLE FYEHG    S+S
Sbjct:    1 MMMNESEERSTSDPKDRATLALPLLSRDNNTWEQFQGANIVADTAHRGEWNDDNSRGLLWRLLLGVVPRDSPPSEWATEMANKRGEYRRLKAEHRVDISKVLDTTDPMSANPLFSGSGSGDDPWSHFYERKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSVWADLNTGTAYRQGMHEVLAPLILVLEKEVAAATRAEAIAGDSTXXXXXXXXXXXXXXXXXXXXXXXXXXVKASPWVGKSIVNGEPLNAGTHPAFAAILGHGSTPEDLEADAFWLFSAVMSGLERFYEHGEKATSTS 304          
BLAST of mRNA_S-firma_M_contig934.20307.1 vs. uniprot
Match: D7FWI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWI0_ECTSI)

HSP 1 Score: 230 bits (587), Expect = 7.820e-69
Identity = 109/135 (80.74%), Postives = 116/135 (85.93%), Query Frame = 0
Query:   57 LRGEWKDDNTRALLWRLLLGVIPGGSPPSEWATEMANKRAQHRRLAAEHRVDIVN-------MSANPLLPGSGSGDDPWNHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQ 184
            + GEW DDN+R LLWRLLLGVIP  SPPSEWATEMANKR ++RRL AEHRVDI         MSANPL  GSGSGDDPW+HFY+RKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLS+WADLNT TAYRQ
Sbjct:    6 MSGEWNDDNSRGLLWRLLLGVIPRDSPPSEWATEMANKRGEYRRLKAEHRVDISKVLDTTDPMSANPLFSGSGSGDDPWSHFYERKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSVWADLNTETAYRQ 140          
BLAST of mRNA_S-firma_M_contig934.20307.1 vs. uniprot
Match: A0A7S0YK08_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YK08_9CRYP)

HSP 1 Score: 96.3 bits (238), Expect = 4.430e-20
Identity = 57/152 (37.50%), Postives = 85/152 (55.92%), Query Frame = 0
Query:   56 ALRGEWKDDNTRALLWRLLLGVIPGG--SPPSEWATEMANKRAQHRRLAAEHRVDIVNMS--ANPLL--PGSGSGDDPWNHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEA 201
            A+ G  ++   R+L WRL LGV+P G  S P+ W   +  +RA +     E  VD    S  A+PL+  P + + D  W  +++ +++   I+ DLERL P    D F     Q  +L  L++WA LN AT+YRQGMHEVLA ++  L ++A
Sbjct:   17 AMTGGLRNSTIRSLAWRLFLGVLPAGECSLPA-WVAAVEEQRASYDARCEEFLVDPYKQSDGADPLVNNPLAQTEDSAWTKYFELRQLQKDIQIDLERLNPDD--DFFRGAGVQGAMLRALTVWACLNPATSYRQGMHEVLAHIVKVLHEDA 165          
BLAST of mRNA_S-firma_M_contig934.20307.1 vs. uniprot
Match: A0A2R5GTG8_9STRA (TBC1 domain family member 5 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GTG8_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.570e-18
Identity = 63/196 (32.14%), Postives = 94/196 (47.96%), Query Frame = 0
Query:   34 LPLLSRNDA-TWKEFGADLIAD--AALRGEWKDDNTRALLWRLLLGVIPGGSPPSEWATEMANKRAQHRRLAAEHRVDIV--------NMSANPL----------------LPGSGSG-DDPWNHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEA 201
            L +   +DA  W+    D++A   A+L+G       R+L WR   G +P  + P   A    N  A  RR     R  +V        +   +PL                  G+ +G  +PW  F++ KE+ + I+ DLERL+PTGC D F+ P   ++L  VL  W+ L+  T+YRQGMHE+ APL+  L  +A
Sbjct:   13 LKVAKGDDACAWEALADDMVAGNLASLQGL----GARSLAWRAACGTLPVAASPRAIAATWPNVAADLRREYEALRESLVVDPDEAADDGDFDPLGGXXXXXXXXXXXXHGSSGAKTGVSNPWEEFHKDKELLEEIRQDLERLYPTGCDDFFMEPTVSKVLQGVLFTWSKLHPDTSYRQGMHELAAPLLYCLHADA 204          
BLAST of mRNA_S-firma_M_contig934.20307.1 vs. uniprot
Match: A0A7S0LIA7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LIA7_9EUKA)

HSP 1 Score: 94.7 bits (234), Expect = 2.730e-18
Identity = 65/176 (36.93%), Postives = 92/176 (52.27%), Query Frame = 0
Query:   39 RNDATWKEFGAD--LIADAALRGEWKDDNTRALLWRLLLGVIPGGSPPSEWAT---EMANKRAQHRRLAAEHRVD------IVNMS-ANPLLPGSGSGDDPWNHFYQRKEMTDTIKADLERLFPTGCGDHFLAPAR-QELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEA 201
            RND      G D  L+  AA+ G  +D   R L WR LL  +P G P    +T   +    R ++  L  +H +D       +++S ANPL   + S   PW+ F++ +E+ + IK DL RL P   G  F + AR QE +  +L +W  L+   +YRQGMHE+LAPL   LE EA
Sbjct:    6 RNDFKRLFLGIDERLLFRAAMDGSLRDCPVRGLAWRYLLATLPAGVPLKRVSTLVDQTIAARREYMALREKHCIDPRTSGESLDISLANPLSQDANS---PWSEFFEFEELREEIKRDLMRLHP---GHDFFSGARVQETMERILFVWCKLHPNLSYRQGMHELLAPLYHVLETEA 175          
BLAST of mRNA_S-firma_M_contig934.20307.1 vs. uniprot
Match: A0A0E9NEK8_SAICN (Rab-GAP TBC domain-containing protein n=2 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NEK8_SAICN)

HSP 1 Score: 95.5 bits (236), Expect = 3.240e-18
Identity = 64/198 (32.32%), Postives = 99/198 (50.00%), Query Frame = 0
Query:    4 SSVAAVCAAMMMGEDEEQYAEEPQIPSSLNLPLLSRNDATWKEFGADLIADAALRGEWKDDNTRALLWRLLLGVIPGGSPPSEWATEMANKRAQHRRLAAEHRVDIVNMSANPLLPGSGSGDDPWNHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEA 201
            S++    AA     D+  Y  + ++ S L+ P  + ND          +  AAL         R+L W+L L V+P   P S W+  ++ +RA++  L A +    V  S +PL     S   PW   Y  +E+ +TI  D +R FP      F  P  Q++LL VL  ++ LN  T+YRQGMHE+LAP++ A++ +A
Sbjct:   90 SAIYTSAAAPQTHLDQSPYQHQYRMTSPLDFPR-TIND----------LRQAALNNT-PTSVPRSLRWKLFLRVLPSYHP-SSWSDAISRERARYAELKARYTAPGVVESGDPLSQDESS---PWKERYADEELKETIIQDTQRTFPDI--PFFRLPRTQQILLDVLFTYSKLNPDTSYRQGMHELLAPILFAVQGDA 269          
BLAST of mRNA_S-firma_M_contig934.20307.1 vs. uniprot
Match: A0A7S4UQR4_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4UQR4_GUITH)

HSP 1 Score: 91.7 bits (226), Expect = 3.100e-17
Identity = 51/158 (32.28%), Postives = 83/158 (52.53%), Query Frame = 0
Query:   52 IADAALRGEWKDDNTRALLWRLLLGVIPGGSPPS-EWATEMANKRAQHRRLAAEHRVDIVN-------MSANPLLPGSGSGDDPWNHFYQRKEMTDTIKADLERLFPTGCGDHFLAPAR-QELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKE 200
            + D    G  KD   R++ WR+ LGV+P  S     W T M  +R +++ L  E  +D          +  NPL    GS    W  +++ +E+  +I  D+ERL      D FL     Q+ +L VL++W++L++  +YRQGMHE+LAP++  L ++
Sbjct:   29 LRDQVFEGYLKDSPMRSVCWRVFLGVLPTDSASFLSWVTIMKERRKRYQELKEEFLIDPYKDGGQKDPLHDNPLAQAEGS---VWKKYFELQELQKSIMIDIERL---NVEDEFLKQEEAQKAMLRVLTVWSNLHSELSYRQGMHELLAPIVAVLHRD 180          
BLAST of mRNA_S-firma_M_contig934.20307.1 vs. uniprot
Match: UPI001C710424 (TBC1 domain family member 5-like isoform X1 n=11 Tax=Penaeus TaxID=133894 RepID=UPI001C710424)

HSP 1 Score: 92.0 bits (227), Expect = 4.950e-17
Identity = 60/199 (30.15%), Postives = 99/199 (49.75%), Query Frame = 0
Query:    5 SVAAVCAAMMMGEDEEQYAEEPQIPSSLNLPLLSRNDATWKEFGADLIADAALRGEWKDDNTRALLWRLLLGVIPGGSPPSEWATEMANKRAQHRRLAAEHRVDIV----NMSANPLL--PGSGSGDDPWNHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQGMHEVLAPLILAL 197
            S AA    + M +++   A +P       LP  +      K  G D +      GE +    R++ WR+ LGV+PG    ++W   + ++R ++  +   HR+ I     + + +PLL  P S     PWN +++  E+   I+ D+ R FP    + F +   ++L+++VL  +A  N   +YRQGMHEVLAPLI  L
Sbjct:   40 STAAPTERLSMRQEDHFSATQPTRVLGGGLPYAAEWAQICKCAGTDAMQSLGQSGEMRASRFRSVCWRIYLGVLPGDH--TQWLKVIRDERERYEDI--RHRLMITPGLGDETLDPLLNNPLSQHEQSPWNQYFEDSELKKLIRQDVVRTFPEV--EFFQSLRIRDLMVTVLFCYARQNPDVSYRQGMHEVLAPLIFVL 232          
BLAST of mRNA_S-firma_M_contig934.20307.1 vs. uniprot
Match: L1JXD2_GUITC (Rab-GAP TBC domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JXD2_GUITC)

HSP 1 Score: 91.7 bits (226), Expect = 6.040e-17
Identity = 51/158 (32.28%), Postives = 83/158 (52.53%), Query Frame = 0
Query:   52 IADAALRGEWKDDNTRALLWRLLLGVIPGGSPPS-EWATEMANKRAQHRRLAAEHRVDIVN-------MSANPLLPGSGSGDDPWNHFYQRKEMTDTIKADLERLFPTGCGDHFLAPAR-QELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKE 200
            + D    G  KD   R++ WR+ LGV+P  S     W T M  +R +++ L  E  +D          +  NPL    GS    W  +++ +E+  +I  D+ERL      D FL     Q+ +L VL++W++L++  +YRQGMHE+LAP++  L ++
Sbjct:   29 LRDQVFEGYLKDSPMRSVCWRVFLGVLPTDSASFLSWVTIMKERRKRYQELKEEFLIDPYKDGGQKDPLHDNPLAQAEGS---VWKKYFELQELQKSIMIDIERL---NVEDEFLKQEEAQKAMLRVLTVWSNLHSELSYRQGMHELLAPIVAVLHRD 180          
BLAST of mRNA_S-firma_M_contig934.20307.1 vs. uniprot
Match: UPI00106D8B13 (TBC1 domain family member 5-like isoform X1 n=3 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106D8B13)

HSP 1 Score: 91.7 bits (226), Expect = 6.670e-17
Identity = 59/196 (30.10%), Postives = 95/196 (48.47%), Query Frame = 0
Query:   17 EDEEQYAEEPQIPSSLNLPLLSRNDATWKE-FGADL----IADAALRGEWKDDNTRALLWRLLLGVIPGGSPPSEWATEMANKRAQHRRLAAEHRVDIVNMSANP-----LLPGSGSGDDPWNHFYQRKEMTDTIKADLERLFPTGCGDHFLAPAR-QELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEA 201
            E  E   E   IP+     L    ++ W++ FG +     + + AL G  +D   R + WRL LG +        W+  +   R ++  L +   +D  +   +        P S   D PW+ +++ K++TD I  DL RLFP   G H+    + +++LL +L  +A +N    Y+QGMHEVLAPL+  LE E+
Sbjct:   46 EQGESSNENIYIPAVTKESL----ESEWQQMFGTENYKKDLQNLALTGRLRDRRFRGVCWRLFLGCL--SDDVGHWSETVCESRTRYENLKSMFFIDPYSSKVDEDNVQVFDPLSQEIDSPWSQYFEDKKLTDLIYQDLNRLFP---GMHYFQSKKIKDVLLHILFCYAKMNPNVGYKQGMHEVLAPLLFVLENES 232          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig934.20307.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGW7_9PHAE4.480e-12166.12Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
D7FWI0_ECTSI7.820e-6980.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0YK08_9CRYP4.430e-2037.50Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A2R5GTG8_9STRA1.570e-1832.14TBC1 domain family member 5 n=1 Tax=Hondaea fermen... [more]
A0A7S0LIA7_9EUKA2.730e-1836.93Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A0E9NEK8_SAICN3.240e-1832.32Rab-GAP TBC domain-containing protein n=2 Tax=Sait... [more]
A0A7S4UQR4_GUITH3.100e-1732.28Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]
UPI001C7104244.950e-1730.15TBC1 domain family member 5-like isoform X1 n=11 T... [more]
L1JXD2_GUITC6.040e-1732.28Rab-GAP TBC domain-containing protein n=1 Tax=Guil... [more]
UPI00106D8B136.670e-1730.10TBC1 domain family member 5-like isoform X1 n=3 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.8.270coord: 89..205
e-value: 9.1E-7
score: 30.9
NoneNo IPR availablePANTHERPTHR22957:SF337TBC1 DOMAIN FAMILY MEMBER 29-RELATEDcoord: 67..281
NoneNo IPR availablePANTHERPTHR22957TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEINcoord: 67..281
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 129..294
e-value: 2.0E-10
score: 40.7
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 61..305
score: 10.696
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 63..292

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig934contigS-firma_M_contig934:22118..24064 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig934.20307.1mRNA_S-firma_M_contig934.20307.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig934 22118..24064 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig934.20307.1 ID=prot_S-firma_M_contig934.20307.1|Name=mRNA_S-firma_M_contig934.20307.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=305bp
HPHSSVAAVCAAMMMGEDEEQYAEEPQIPSSLNLPLLSRNDATWKEFGAD
LIADAALRGEWKDDNTRALLWRLLLGVIPGGSPPSEWATEMANKRAQHRR
LAAEHRVDIVNMSANPLLPGSGSGDDPWNHFYQRKEMTDTIKADLERLFP
TGCGDHFLAPARQELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKE
AAAASRSDTTTNRSAAGAVGGGGGSGEATESRSTTSSWLGTSMVNGAPMD
AATHPGAAAILGRGSTPQDLEADAFWLFSAVMTGLEGFYEHGTNNASSSR
RPPGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035969Rab-GTPase_TBC_sf
IPR000195Rab-GTPase-TBC_dom