mRNA_S-firma_M_contig934.20307.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig934.20307.1 vs. uniprot
Match: A0A6H5KGW7_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGW7_9PHAE) HSP 1 Score: 371 bits (953), Expect = 4.480e-121 Identity = 201/304 (66.12%), Postives = 227/304 (74.67%), Query Frame = 1
Query: 37 MMMGEDEEQYAEEPQIPSSLNLPLLSRNDATWKEF-GADLIADAALRGEWKDDNTRALLWRLLLGVIPGGSPPSEWATEMANKRAQHRRLAAEHRVDIVN-------MSANPLLPGSGSGDDPWNHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEAXXXXXXXXXXXXXXXXXXXXXXXXGEATESRST---------TSSWLGTSMVNGAPMDAATHPGAAAILGRGSTPQDLEADAFWLFSAVMTGLEGFYEHGTNNASSS 897
MMM E EE+ +P+ ++L LPLLSR++ TW++F GA+++AD A RGEW DDN+R LLWRLLLGV+P SPPSEWATEMANKR ++RRL AEHRVDI MSANPL GSGSGDDPW+HFY+RKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLS+WADLNT TAYRQGMHEVLAPLIL LEKE XXXXXXXXXX S W+G S+VNG P++A THP AAILG GSTP+DLEADAFWLFSAVM+GLE FYEHG S+S
Sbjct: 1 MMMNESEERSTSDPKDRATLALPLLSRDNNTWEQFQGANIVADTAHRGEWNDDNSRGLLWRLLLGVVPRDSPPSEWATEMANKRGEYRRLKAEHRVDISKVLDTTDPMSANPLFSGSGSGDDPWSHFYERKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSVWADLNTGTAYRQGMHEVLAPLILVLEKEVAAATRAEAIAGDSTXXXXXXXXXXXXXXXXXXXXXXXXXXVKASPWVGKSIVNGEPLNAGTHPAFAAILGHGSTPEDLEADAFWLFSAVMSGLERFYEHGEKATSTS 304
BLAST of mRNA_S-firma_M_contig934.20307.1 vs. uniprot
Match: D7FWI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWI0_ECTSI) HSP 1 Score: 230 bits (587), Expect = 7.820e-69 Identity = 109/135 (80.74%), Postives = 116/135 (85.93%), Query Frame = 1
Query: 169 LRGEWKDDNTRALLWRLLLGVIPGGSPPSEWATEMANKRAQHRRLAAEHRVDIVN-------MSANPLLPGSGSGDDPWNHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQ 552
+ GEW DDN+R LLWRLLLGVIP SPPSEWATEMANKR ++RRL AEHRVDI MSANPL GSGSGDDPW+HFY+RKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLS+WADLNT TAYRQ
Sbjct: 6 MSGEWNDDNSRGLLWRLLLGVIPRDSPPSEWATEMANKRGEYRRLKAEHRVDISKVLDTTDPMSANPLFSGSGSGDDPWSHFYERKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSVWADLNTETAYRQ 140
BLAST of mRNA_S-firma_M_contig934.20307.1 vs. uniprot
Match: A0A7S0YK08_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YK08_9CRYP) HSP 1 Score: 96.3 bits (238), Expect = 4.430e-20 Identity = 57/152 (37.50%), Postives = 85/152 (55.92%), Query Frame = 1
Query: 166 ALRGEWKDDNTRALLWRLLLGVIPGG--SPPSEWATEMANKRAQHRRLAAEHRVDIVNMS--ANPLL--PGSGSGDDPWNHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEA 603
A+ G ++ R+L WRL LGV+P G S P+ W + +RA + E VD S A+PL+ P + + D W +++ +++ I+ DLERL P D F Q +L L++WA LN AT+YRQGMHEVLA ++ L ++A
Sbjct: 17 AMTGGLRNSTIRSLAWRLFLGVLPAGECSLPA-WVAAVEEQRASYDARCEEFLVDPYKQSDGADPLVNNPLAQTEDSAWTKYFELRQLQKDIQIDLERLNPDD--DFFRGAGVQGAMLRALTVWACLNPATSYRQGMHEVLAHIVKVLHEDA 165
BLAST of mRNA_S-firma_M_contig934.20307.1 vs. uniprot
Match: A0A2R5GTG8_9STRA (TBC1 domain family member 5 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GTG8_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 1.570e-18 Identity = 63/196 (32.14%), Postives = 94/196 (47.96%), Query Frame = 1
Query: 100 LPLLSRNDA-TWKEFGADLIAD--AALRGEWKDDNTRALLWRLLLGVIPGGSPPSEWATEMANKRAQHRRLAAEHRVDIV--------NMSANPL----------------LPGSGSG-DDPWNHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEA 603
L + +DA W+ D++A A+L+G R+L WR G +P + P A N A RR R +V + +PL G+ +G +PW F++ KE+ + I+ DLERL+PTGC D F+ P ++L VL W+ L+ T+YRQGMHE+ APL+ L +A
Sbjct: 13 LKVAKGDDACAWEALADDMVAGNLASLQGL----GARSLAWRAACGTLPVAASPRAIAATWPNVAADLRREYEALRESLVVDPDEAADDGDFDPLGGXXXXXXXXXXXXHGSSGAKTGVSNPWEEFHKDKELLEEIRQDLERLYPTGCDDFFMEPTVSKVLQGVLFTWSKLHPDTSYRQGMHELAAPLLYCLHADA 204
BLAST of mRNA_S-firma_M_contig934.20307.1 vs. uniprot
Match: A0A7S0LIA7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LIA7_9EUKA) HSP 1 Score: 94.7 bits (234), Expect = 2.730e-18 Identity = 65/176 (36.93%), Postives = 92/176 (52.27%), Query Frame = 1
Query: 115 RNDATWKEFGAD--LIADAALRGEWKDDNTRALLWRLLLGVIPGGSPPSEWAT---EMANKRAQHRRLAAEHRVD------IVNMS-ANPLLPGSGSGDDPWNHFYQRKEMTDTIKADLERLFPTGCGDHFLAPAR-QELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEA 603
RND G D L+ AA+ G +D R L WR LL +P G P +T + R ++ L +H +D +++S ANPL + S PW+ F++ +E+ + IK DL RL P G F + AR QE + +L +W L+ +YRQGMHE+LAPL LE EA
Sbjct: 6 RNDFKRLFLGIDERLLFRAAMDGSLRDCPVRGLAWRYLLATLPAGVPLKRVSTLVDQTIAARREYMALREKHCIDPRTSGESLDISLANPLSQDANS---PWSEFFEFEELREEIKRDLMRLHP---GHDFFSGARVQETMERILFVWCKLHPNLSYRQGMHELLAPLYHVLETEA 175
BLAST of mRNA_S-firma_M_contig934.20307.1 vs. uniprot
Match: A0A0E9NEK8_SAICN (Rab-GAP TBC domain-containing protein n=2 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NEK8_SAICN) HSP 1 Score: 95.5 bits (236), Expect = 3.240e-18 Identity = 64/198 (32.32%), Postives = 99/198 (50.00%), Query Frame = 1
Query: 10 SSVAAVCAAMMMGEDEEQYAEEPQIPSSLNLPLLSRNDATWKEFGADLIADAALRGEWKDDNTRALLWRLLLGVIPGGSPPSEWATEMANKRAQHRRLAAEHRVDIVNMSANPLLPGSGSGDDPWNHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEA 603
S++ AA D+ Y + ++ S L+ P + ND + AAL R+L W+L L V+P P S W+ ++ +RA++ L A + V S +PL S PW Y +E+ +TI D +R FP F P Q++LL VL ++ LN T+YRQGMHE+LAP++ A++ +A
Sbjct: 90 SAIYTSAAAPQTHLDQSPYQHQYRMTSPLDFPR-TIND----------LRQAALNNT-PTSVPRSLRWKLFLRVLPSYHP-SSWSDAISRERARYAELKARYTAPGVVESGDPLSQDESS---PWKERYADEELKETIIQDTQRTFPDI--PFFRLPRTQQILLDVLFTYSKLNPDTSYRQGMHELLAPILFAVQGDA 269
BLAST of mRNA_S-firma_M_contig934.20307.1 vs. uniprot
Match: A0A7S4UQR4_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4UQR4_GUITH) HSP 1 Score: 91.7 bits (226), Expect = 3.100e-17 Identity = 51/158 (32.28%), Postives = 83/158 (52.53%), Query Frame = 1
Query: 154 IADAALRGEWKDDNTRALLWRLLLGVIPGGSPPS-EWATEMANKRAQHRRLAAEHRVDIVN-------MSANPLLPGSGSGDDPWNHFYQRKEMTDTIKADLERLFPTGCGDHFLAPAR-QELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKE 600
+ D G KD R++ WR+ LGV+P S W T M +R +++ L E +D + NPL GS W +++ +E+ +I D+ERL D FL Q+ +L VL++W++L++ +YRQGMHE+LAP++ L ++
Sbjct: 29 LRDQVFEGYLKDSPMRSVCWRVFLGVLPTDSASFLSWVTIMKERRKRYQELKEEFLIDPYKDGGQKDPLHDNPLAQAEGS---VWKKYFELQELQKSIMIDIERL---NVEDEFLKQEEAQKAMLRVLTVWSNLHSELSYRQGMHELLAPIVAVLHRD 180
BLAST of mRNA_S-firma_M_contig934.20307.1 vs. uniprot
Match: UPI001C710424 (TBC1 domain family member 5-like isoform X1 n=11 Tax=Penaeus TaxID=133894 RepID=UPI001C710424) HSP 1 Score: 92.0 bits (227), Expect = 4.950e-17 Identity = 60/199 (30.15%), Postives = 99/199 (49.75%), Query Frame = 1
Query: 13 SVAAVCAAMMMGEDEEQYAEEPQIPSSLNLPLLSRNDATWKEFGADLIADAALRGEWKDDNTRALLWRLLLGVIPGGSPPSEWATEMANKRAQHRRLAAEHRVDIV----NMSANPLL--PGSGSGDDPWNHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQGMHEVLAPLILAL 591
S AA + M +++ A +P LP + K G D + GE + R++ WR+ LGV+PG ++W + ++R ++ + HR+ I + + +PLL P S PWN +++ E+ I+ D+ R FP + F + ++L+++VL +A N +YRQGMHEVLAPLI L
Sbjct: 40 STAAPTERLSMRQEDHFSATQPTRVLGGGLPYAAEWAQICKCAGTDAMQSLGQSGEMRASRFRSVCWRIYLGVLPGDH--TQWLKVIRDERERYEDI--RHRLMITPGLGDETLDPLLNNPLSQHEQSPWNQYFEDSELKKLIRQDVVRTFPEV--EFFQSLRIRDLMVTVLFCYARQNPDVSYRQGMHEVLAPLIFVL 232
BLAST of mRNA_S-firma_M_contig934.20307.1 vs. uniprot
Match: L1JXD2_GUITC (Rab-GAP TBC domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JXD2_GUITC) HSP 1 Score: 91.7 bits (226), Expect = 6.040e-17 Identity = 51/158 (32.28%), Postives = 83/158 (52.53%), Query Frame = 1
Query: 154 IADAALRGEWKDDNTRALLWRLLLGVIPGGSPPS-EWATEMANKRAQHRRLAAEHRVDIVN-------MSANPLLPGSGSGDDPWNHFYQRKEMTDTIKADLERLFPTGCGDHFLAPAR-QELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKE 600
+ D G KD R++ WR+ LGV+P S W T M +R +++ L E +D + NPL GS W +++ +E+ +I D+ERL D FL Q+ +L VL++W++L++ +YRQGMHE+LAP++ L ++
Sbjct: 29 LRDQVFEGYLKDSPMRSVCWRVFLGVLPTDSASFLSWVTIMKERRKRYQELKEEFLIDPYKDGGQKDPLHDNPLAQAEGS---VWKKYFELQELQKSIMIDIERL---NVEDEFLKQEEAQKAMLRVLTVWSNLHSELSYRQGMHELLAPIVAVLHRD 180
BLAST of mRNA_S-firma_M_contig934.20307.1 vs. uniprot
Match: UPI00106D8B13 (TBC1 domain family member 5-like isoform X1 n=3 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106D8B13) HSP 1 Score: 91.7 bits (226), Expect = 6.670e-17 Identity = 59/196 (30.10%), Postives = 95/196 (48.47%), Query Frame = 1
Query: 49 EDEEQYAEEPQIPSSLNLPLLSRNDATWKE-FGADL----IADAALRGEWKDDNTRALLWRLLLGVIPGGSPPSEWATEMANKRAQHRRLAAEHRVDIVNMSANP-----LLPGSGSGDDPWNHFYQRKEMTDTIKADLERLFPTGCGDHFLAPAR-QELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEA 603
E E E IP+ L ++ W++ FG + + + AL G +D R + WRL LG + W+ + R ++ L + +D + + P S D PW+ +++ K++TD I DL RLFP G H+ + +++LL +L +A +N Y+QGMHEVLAPL+ LE E+
Sbjct: 46 EQGESSNENIYIPAVTKESL----ESEWQQMFGTENYKKDLQNLALTGRLRDRRFRGVCWRLFLGCL--SDDVGHWSETVCESRTRYENLKSMFFIDPYSSKVDEDNVQVFDPLSQEIDSPWSQYFEDKKLTDLIYQDLNRLFP---GMHYFQSKKIKDVLLHILFCYAKMNPNVGYKQGMHEVLAPLLFVLENES 232 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig934.20307.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig934.20307.1 >prot_S-firma_M_contig934.20307.1 ID=prot_S-firma_M_contig934.20307.1|Name=mRNA_S-firma_M_contig934.20307.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=305bp HPHSSVAAVCAAMMMGEDEEQYAEEPQIPSSLNLPLLSRNDATWKEFGADback to top mRNA from alignment at S-firma_M_contig934:22118..24064+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig934.20307.1 ID=mRNA_S-firma_M_contig934.20307.1|Name=mRNA_S-firma_M_contig934.20307.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=1947bp|location=Sequence derived from alignment at S-firma_M_contig934:22118..24064+ (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig934:22118..24064+ >mRNA_S-firma_M_contig934.20307.1 ID=mRNA_S-firma_M_contig934.20307.1|Name=mRNA_S-firma_M_contig934.20307.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=1830bp|location=Sequence derived from alignment at S-firma_M_contig934:22118..24064+ (Sphaerotrichia firma Sfir_13m male)back to top |