prot_S-firma_M_contig9336.20300.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9336.20300.1
Unique Nameprot_S-firma_M_contig9336.20300.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length192
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9336.20300.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..191
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..14
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.562

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9336contigS-firma_M_contig9336:2030..2605 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9336.20300.1mRNA_S-firma_M_contig9336.20300.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9336 2030..2871 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9336.20300.1 ID=prot_S-firma_M_contig9336.20300.1|Name=mRNA_S-firma_M_contig9336.20300.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=192bp
LEPRHALLFLSLLFPPSSVDLSALICERRQTKRILTSCGLSHVGLWWKPR
NRLPLQTAAAVVWNTSCTHVTRWVAEESNSRQSVSDVTCASESIVELLAW
ASWTVAQECIACRRLDQSTRTTEIRIAKTIDRLLPYTTQDKPPPVDTFGW
ALKNIVTGSLILWGVAYLLCTRVIGYWYKAGSIGGVITMGV*
back to top