prot_S-firma_M_contig933.20293.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig933.20293.1
Unique Nameprot_S-firma_M_contig933.20293.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length169
Homology
BLAST of mRNA_S-firma_M_contig933.20293.1 vs. uniprot
Match: A0A6H5KCH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCH6_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 4.450e-18
Identity = 35/57 (61.40%), Postives = 42/57 (73.68%), Query Frame = 0
Query:  113 SNDRDILLVFFRSTGGANWSNKTNWGTDNDLATWYGVEANDRGRVLKLELDENNLRG 169
            S DR+ L+  FRS GGA W  + NW T + LATWYGVE ND+GRV+KL +D NNLRG
Sbjct:    3 STDREALITLFRSAGGARWFRRNNWLTSDGLATWYGVEVNDQGRVVKLRVDANNLRG 59          
BLAST of mRNA_S-firma_M_contig933.20293.1 vs. uniprot
Match: A0A6H5K3C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3C2_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 1.320e-16
Identity = 33/55 (60.00%), Postives = 40/55 (72.73%), Query Frame = 0
Query:  115 DRDILLVFFRSTGGANWSNKTNWGTDNDLATWYGVEANDRGRVLKLELDENNLRG 169
            DRD L+  +R+TGG  WS   NW TD+DL TW+GV  ND+GRV+KLEL  NNL G
Sbjct:    5 DRDALVAMYRATGGEKWSTSQNWDTDSDLKTWHGVNVNDQGRVVKLELGFNNLEG 59          
BLAST of mRNA_S-firma_M_contig933.20293.1 vs. uniprot
Match: A0A6H5K3D6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3D6_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 9.190e-16
Identity = 34/59 (57.63%), Postives = 38/59 (64.41%), Query Frame = 0
Query:  111 KTSNDRDILLVFFRSTGGANWSNKTNWGTDNDLATWYGVEANDRGRVLKLELDENNLRG 169
            K S DR  L+  F +TGGANW   T W TD  L  WYGVE ND GRV+KL L  NNL+G
Sbjct:    8 KMSTDRAALVALFNATGGANWKKNTKWNTDAPLGQWYGVEVNDAGRVVKLSLRYNNLKG 66          
BLAST of mRNA_S-firma_M_contig933.20293.1 vs. uniprot
Match: D8LCS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS7_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 2.360e-14
Identity = 34/55 (61.82%), Postives = 40/55 (72.73%), Query Frame = 0
Query:  115 DRDILLVFFRSTGGANWSNKTNWGTDNDLATWYGVEANDRGRVLKLELDENNLRG 169
            DRD L+  FRSTGGA+W  K NW T  ++ATW GV+ ND GRV+KL L  NNLRG
Sbjct:    5 DRDALVALFRSTGGASWDKKDNWDTAAEIATWSGVQVNDEGRVVKLRLKSNNLRG 59          
BLAST of mRNA_S-firma_M_contig933.20293.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 3.110e-14
Identity = 32/57 (56.14%), Postives = 42/57 (73.68%), Query Frame = 0
Query:  113 SNDRDILLVFFRSTGGANWSNKTNWGTDNDLATWYGVEANDRGRVLKLELDENNLRG 169
            S DRD+L+  + +T GANW N  NWGTD DL+ W+GV  N +GRV++L+L  NNLRG
Sbjct:    3 STDRDVLVALYNATEGANWQNSINWGTDADLSQWFGVTVNHQGRVVRLDLSFNNLRG 59          
BLAST of mRNA_S-firma_M_contig933.20293.1 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 1.070e-13
Identity = 31/55 (56.36%), Postives = 42/55 (76.36%), Query Frame = 0
Query:  115 DRDILLVFFRSTGGANWSNKTNWGTDNDLATWYGVEANDRGRVLKLELDENNLRG 169
            DRD+L+  + +T G NW NKTNW T+ DL+ W+GV+A+D+GRV+KL L  N LRG
Sbjct:    5 DRDVLVALYNATDGPNWKNKTNWDTNADLSDWHGVKADDQGRVVKLSLSANKLRG 59          
BLAST of mRNA_S-firma_M_contig933.20293.1 vs. uniprot
Match: A0A6H5JBQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBQ0_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 2.720e-13
Identity = 33/57 (57.89%), Postives = 42/57 (73.68%), Query Frame = 0
Query:  113 SNDRDILLVFFRSTGGANWSNKTNWGTDNDLATWYGVEANDRGRVLKLELDENNLRG 169
            S DRD L+  F ST GANW+   NW TD +L TW+GV+ N+RGRV+KL+L  +NLRG
Sbjct:  402 STDRDALVALFISTNGANWTCNDNWDTDAELGTWHGVDVNERGRVVKLQLGLHNLRG 458          
BLAST of mRNA_S-firma_M_contig933.20293.1 vs. uniprot
Match: A0A7X8SMX3_9BACT (Uncharacterized protein n=1 Tax=Flammeovirga agarivorans TaxID=2726742 RepID=A0A7X8SMX3_9BACT)

HSP 1 Score: 76.6 bits (187), Expect = 3.480e-13
Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0
Query:  115 DRDILLVFFRSTGGANWSNKTNWGTDNDLATWYGVEANDRGRVLKLELDENNLRG 169
            DRDIL++F+ ST G NW+N  NWG+D  L+ WYGV+ ND GRV+ + +  NN+ G
Sbjct:  602 DRDILMLFYESTNGENWTNNENWGSDLPLSEWYGVDTNDEGRVVSIAIYNNNING 656          
BLAST of mRNA_S-firma_M_contig933.20293.1 vs. uniprot
Match: A0A6H5JFA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFA4_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 5.500e-13
Identity = 32/55 (58.18%), Postives = 39/55 (70.91%), Query Frame = 0
Query:  115 DRDILLVFFRSTGGANWSNKTNWGTDNDLATWYGVEANDRGRVLKLELDENNLRG 169
            DR+ L  F+ +T GA W   TNWG+   L+ WYGVEAND+GRV+KL L  NNLRG
Sbjct:   39 DRESLTAFYNATDGAKWIRNTNWGSGAPLSDWYGVEANDQGRVVKLYLSSNNLRG 93          
BLAST of mRNA_S-firma_M_contig933.20293.1 vs. uniprot
Match: D7FH89_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH89_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 6.800e-13
Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 0
Query:  112 TSNDRDILLVFFRSTGGANWSNKTNWGTDNDLATWYGVEANDRGRVLKLELDENNLRG 169
            +S DR  L+  FRSTGG  W    NW TD DL+ W+GVE N  GRV++L+L+ NNLRG
Sbjct:   35 SSEDRAALVALFRSTGGTRWILNANWATDADLSKWHGVEVNQHGRVVELDLNNNNLRG 92          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig933.20293.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCH6_9PHAE4.450e-1861.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3C2_9PHAE1.320e-1660.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3D6_9PHAE9.190e-1657.63Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LCS7_ECTSI2.360e-1461.82LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FJV1_ECTSI3.110e-1456.14LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LKS5_ECTSI1.070e-1356.36LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JBQ0_9PHAE2.720e-1357.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7X8SMX3_9BACT3.480e-1352.73Uncharacterized protein n=1 Tax=Flammeovirga agari... [more]
A0A6H5JFA4_9PHAE5.500e-1358.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH89_ECTSI6.800e-1355.17Putative Leucine Rich Repeat Protein n=1 Tax=Ectoc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 10..41
NoneNo IPR availableCOILSCoilCoilcoord: 57..77
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 109..169
e-value: 1.6E-13
score: 51.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig933contigS-firma_M_contig933:1121..4356 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig933.20293.1mRNA_S-firma_M_contig933.20293.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig933 1121..4356 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig933.20293.1 ID=prot_S-firma_M_contig933.20293.1|Name=mRNA_S-firma_M_contig933.20293.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=169bp
EGITTKGTYIDDLQGKLDAHKKEYEDLFAKIEKQLQVHLEERRPEAEKIA
SANEKAAREEKRRLEESRLKLDSYRESHTVHDDDVEQLKEDIATKGKHID
DLQGRLDAHKKTSNDRDILLVFFRSTGGANWSNKTNWGTDNDLATWYGVE
ANDRGRVLKLELDENNLRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf