prot_S-firma_M_contig9281.20232.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9281.20232.1
Unique Nameprot_S-firma_M_contig9281.20232.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length321
Homology
BLAST of mRNA_S-firma_M_contig9281.20232.1 vs. uniprot
Match: D8LC56_ECTSI (Peptidyl-Asp metalloendopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC56_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 9.440e-33
Identity = 89/203 (43.84%), Postives = 114/203 (56.16%), Query Frame = 0
Query:  124 ICDTLEEAKTARVLRFTLSSSEEVVADRKSFATLRKEAFTDRLSRNIFTGSVRAGPDYTGYRRIISMSWTG-CSAQNFQVKMLSPSRYGGVDTTVSHPSRETSGGFLIAKVHHIPHDESDVRTNTDIDLPENEDXXXXXXXXXXXDAEVDRPTEGEDRRRLDT----LTMRRVLAREAERGIEAARLEDPDIDAKDSDVELLQ 321
            +CDTLE+AK A+ L F++ + + V+AD  SF T             I+TG+V+   D+ G  R ISM+WT  CS QNF V+M+SP++ GGVDT VS P+      FL+A VHH   DE DV           ED             E     +G  R  LD     LT RR+LA+EAERGIE ARL+DPDIDAKD+D+  LQ
Sbjct:    1 MCDTLEDAKEAKALEFSIGAGQTVIADLVSFTT-------------IWTGTVKESEDFDGLPRSISMTWTADCSTQNFVVQMISPAKDGGVDTMVSLPNPSNGENFLLATVHHNSIDEIDV-----------EDDIGRRLQIADSVGEQTNLRQGVQRSALDDGSEILTPRRLLAKEAERGIERARLDDPDIDAKDNDIRQLQ 179          
BLAST of mRNA_S-firma_M_contig9281.20232.1 vs. uniprot
Match: A0A6H5JDN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN0_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 1.030e-18
Identity = 65/137 (47.45%), Postives = 77/137 (56.20%), Query Frame = 0
Query:  190 MSWTG-CSAQNFQVKMLSPSRYGGVDTTVSHPSRETSGGFLIAKVHHIPHDESDVRTNTDIDLPENEDXXXXXXXXXXXDAEVDRPTEGEDRRRLDT----LTMRRVLAREAERGIEAARLEDPDIDAKDSDVELLQ 321
            M+WT  CS QNF V+M+SP++ GGVDT VS P+      FL+A +H+   DE DV           ED             E     EG  R  LD     LT RR+LA+EAERGIE ARLEDPDIDAKD D+ LLQ
Sbjct:    1 MTWTADCSTQNFVVQMISPAKDGGVDTVVSLPNPSNGENFLLATIHYNSIDEIDV-----------EDDIGRRLQIADSVGEQTNLREGAQRYALDDGLEILTPRRLLAKEAERGIERARLEDPDIDAKDCDIRLLQ 126          
BLAST of mRNA_S-firma_M_contig9281.20232.1 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 6.240e-10
Identity = 50/156 (32.05%), Postives = 81/156 (51.92%), Query Frame = 0
Query:   91 IHEDGVDSEGEAWRKAMNTDGLLNAT-KVERGELICDTLEEAKTARVLRFTLSSSEEVVADRKSFATLRKEAFTDRLSRNIFTGSV-RAGPDYTGYRRIISMSWTG-CSAQNFQVKMLSPSRYGGVDTTVSHP-SRETSGGFLIAKVHHIPHDESD 242
            I ED    E E   + + TD L      +E G+L+CD+LE+A  + +LRFT+SS+E V+A+R S++++      D  +R  + G V    P      R +SM+WT  C  + F +K++S +  G      S P S  +S    + ++    +DESD
Sbjct:  144 IPEDEHQVE-EGLVEVLETDELTAVMGDIELGDLLCDSLEDATDSSLLRFTISSTETVIAERTSYSSIDGNVLPDGNARKTWLGEVVDPEPSTNSIPRTVSMTWTDPCDIETFLLKLVSRNSDGSTSIATSVPCSAGSSSEICMVELQKFFYDESD 298          
BLAST of mRNA_S-firma_M_contig9281.20232.1 vs. uniprot
Match: D8LLU0_ECTSI (PKD domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLU0_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 1.240e-7
Identity = 43/147 (29.25%), Postives = 76/147 (51.70%), Query Frame = 0
Query:   77 DATGLPVGFIYNRFIHEDGVDSEGEAWRKAMNTDGLLNAT-KVERGELICDTLEEAKTARVLRFTLSSSEEVVADRKSFATLRKEAFTDRLSRNIFTGSV-RAGPDYTGYRRIISMSWTG-CSAQNFQVKMLSPSRYGGVDTTVSHP 220
            D + + VG ++     E+ ++ E  A   A+ +D        +  GEL+CD+LE+A  + +LRF +SS+E V+A+R S++++    F D  +R  + G V    P      R +SM+WT  C  ++F + ++S +  G      S P
Sbjct:   44 DVSDVGVGEVHPIASDEEEIEQELVA---ALESDPQATVVVHIGLGELLCDSLEDASDSTLLRFNISSTETVIAERTSYSSIDGNIFPDGETRKTWMGEVVDPEPPAGSAPRTVSMTWTNPCGVESFLLTVVSHNNDGSTSIVRSIP 187          
BLAST of mRNA_S-firma_M_contig9281.20232.1 vs. uniprot
Match: D7FTV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV1_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 8.320e-5
Identity = 25/60 (41.67%), Postives = 42/60 (70.00%), Query Frame = 0
Query:  112 LLNATKVERGELICDTLEEAKTARVLRFTLSSSEEVVADRKSFATLRKEAFTDRLSRNIF 171
            LL    +E GEL+CD+LE+A  + +LRFT+SS+E V+A+R S++++     +D ++R  F
Sbjct:    7 LLFVGDIELGELLCDSLEDAADSSLLRFTISSTETVIAERTSYSSIDGSVLSDGITRMSF 66          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9281.20232.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LC56_ECTSI9.440e-3343.84Peptidyl-Asp metalloendopeptidase n=1 Tax=Ectocarp... [more]
A0A6H5JDN0_9PHAE1.030e-1847.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF50_9PHAE6.240e-1032.05LNR domain-containing protein n=2 Tax=Ectocarpus s... [more]
D8LLU0_ECTSI1.240e-729.25PKD domain protein n=1 Tax=Ectocarpus siliculosus ... [more]
D7FTV1_ECTSI8.320e-541.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..321
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.731

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9281contigS-firma_M_contig9281:448..3123 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9281.20232.1mRNA_S-firma_M_contig9281.20232.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9281 447..3123 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9281.20232.1 ID=prot_S-firma_M_contig9281.20232.1|Name=mRNA_S-firma_M_contig9281.20232.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=321bp
RAGFLLWLTLFLSPCRCPSSGCVMRRFVATVLCGLAAAASVSCADGQSLS
ATAGSKVIATSAKNDSDIALTGPDRWDATGLPVGFIYNRFIHEDGVDSEG
EAWRKAMNTDGLLNATKVERGELICDTLEEAKTARVLRFTLSSSEEVVAD
RKSFATLRKEAFTDRLSRNIFTGSVRAGPDYTGYRRIISMSWTGCSAQNF
QVKMLSPSRYGGVDTTVSHPSRETSGGFLIAKVHHIPHDESDVRTNTDID
LPENEDTNVDSPESEDTDAEVDRPTEGEDRRRLDTLTMRRVLAREAERGI
EAARLEDPDIDAKDSDVELLQ
back to top