prot_S-firma_M_contig9280.20231.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9280.20231.1
Unique Nameprot_S-firma_M_contig9280.20231.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length92
Homology
BLAST of mRNA_S-firma_M_contig9280.20231.1 vs. uniprot
Match: D7FUE2_ECTSI (Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE2_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 1.780e-46
Identity = 81/83 (97.59%), Postives = 81/83 (97.59%), Query Frame = 0
Query:    1 MPSIEVGTVGGGTSLPAQAACLDVVGCRGATQAPGRPGENAQQMAKVVAGATLAGELSLVAALASNQLVRAHMQHNRKPQLQS 83
            MPSIEVGTVGGGTSLPAQAACLDVVGCRGATQAPGRPGENAQQMAKVVAGATLAGELSLVAALASNQLVRAHMQHNRKPQ  S
Sbjct:    1 MPSIEVGTVGGGTSLPAQAACLDVVGCRGATQAPGRPGENAQQMAKVVAGATLAGELSLVAALASNQLVRAHMQHNRKPQAPS 83          
BLAST of mRNA_S-firma_M_contig9280.20231.1 vs. uniprot
Match: A0A835YX65_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX65_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.390e-32
Identity = 66/80 (82.50%), Postives = 73/80 (91.25%), Query Frame = 0
Query:    1 MPSIEVGTVGGGTSLPAQAACLDVVGCRGATQAPGRPGENAQQMAKVVAGATLAGELSLVAALASNQLVRAHMQHNRKPQ 80
            MP IEVGTVGGGTSLPAQAACLDV+GCRGA+QAP  PG NA+Q+A+V+A A LAGELSL+AALASNQLVRAHMQHNRK Q
Sbjct:  485 MPCIEVGTVGGGTSLPAQAACLDVIGCRGASQAPDAPGANARQLAQVIAAAVLAGELSLMAALASNQLVRAHMQHNRKKQ 564          
BLAST of mRNA_S-firma_M_contig9280.20231.1 vs. uniprot
Match: A0A7S2FDH1_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FDH1_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.620e-29
Identity = 61/88 (69.32%), Postives = 77/88 (87.50%), Query Frame = 0
Query:    1 MPSIEVGTVGGGTSLPAQAACLDVVGCRGATQAPGRPGENAQQMAKVVAGATLAGELSLVAALASNQLVRAHMQHNRKPQLQSQPAAA 88
            MPSIEVGTVGGGTSLPAQA CLD++G RGA++AP  PG+NAQ++ ++VA A +AGELSL++ALA+N+LV+AHMQHNRKPQ    PAA+
Sbjct:  370 MPSIEVGTVGGGTSLPAQAQCLDIMGVRGASRAPKNPGDNAQKLGRMVAAAVMAGELSLLSALAANELVKAHMQHNRKPQ----PAAS 453          
BLAST of mRNA_S-firma_M_contig9280.20231.1 vs. uniprot
Match: A0A7S0ST55_9STRA (Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0ST55_9STRA)

HSP 1 Score: 109 bits (273), Expect = 3.390e-28
Identity = 56/80 (70.00%), Postives = 70/80 (87.50%), Query Frame = 0
Query:    1 MPSIEVGTVGGGTSLPAQAACLDVVGCRGATQAP-GRPGENAQQMAKVVAGATLAGELSLVAALASNQLVRAHMQHNRKP 79
            MPSIEVGTVGGGT LPAQAACLD++  RGA++ P  +PG+NA+++A+V+  A LAGELSL+AALA+N LVR+HMQHNRKP
Sbjct:   87 MPSIEVGTVGGGTHLPAQAACLDILDVRGASKGPHSQPGDNARKLAQVIGAAVLAGELSLIAALAANHLVRSHMQHNRKP 166          
BLAST of mRNA_S-firma_M_contig9280.20231.1 vs. uniprot
Match: A0A1E7FDJ4_9STRA (Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FDJ4_9STRA)

HSP 1 Score: 109 bits (272), Expect = 8.460e-28
Identity = 58/79 (73.42%), Postives = 67/79 (84.81%), Query Frame = 0
Query:    1 MPSIEVGTVGGGTSLPAQAACLDVVGCRGATQAPGRPGENAQQMAKVVAGATLAGELSLVAALASNQLVRAHMQHNRKP 79
            MPSIEVGTVGGGTSLPAQAACL+ +GCRG    PG   +NA+++A VVA ATLAGELSL+AALA+N LV+AHM HNRKP
Sbjct:  141 MPSIEVGTVGGGTSLPAQAACLEAIGCRGGASTPG---DNARKLATVVAAATLAGELSLLAALAANTLVQAHMVHNRKP 216          
BLAST of mRNA_S-firma_M_contig9280.20231.1 vs. uniprot
Match: A0A7S1CUP3_9STRA (Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CUP3_9STRA)

HSP 1 Score: 103 bits (258), Expect = 4.550e-27
Identity = 56/79 (70.89%), Postives = 64/79 (81.01%), Query Frame = 0
Query:    1 MPSIEVGTVGGGTSLPAQAACLDVVGCRGATQAPGRPGENAQQMAKVVAGATLAGELSLVAALASNQLVRAHMQHNRKP 79
            MPSIEVGTVGGGT LPAQAACL  +G +G  +    PG+NA+Q+A VVA AT+AGELSL+AALASN LV AHM HNRKP
Sbjct:   23 MPSIEVGTVGGGTGLPAQAACLKAIGVKGGGE---NPGDNAKQLAHVVAAATMAGELSLMAALASNSLVAAHMTHNRKP 98          
BLAST of mRNA_S-firma_M_contig9280.20231.1 vs. uniprot
Match: A0A812U1Q8_SYMMI (Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812U1Q8_SYMMI)

HSP 1 Score: 105 bits (261), Expect = 1.820e-26
Identity = 55/86 (63.95%), Postives = 70/86 (81.40%), Query Frame = 0
Query:    1 MPSIEVGTVGGGTSLPAQAACLDVVGCRGATQAPGRPGENAQQMAKVVAGATLAGELSLVAALASNQLVRAHMQHNRKPQLQSQPA 86
            MPSIEVGTVGGGT LPAQ+ CLD+ G RGA++     G+NA+Q+A++V  + LAGELSL+AALA+N LVR+HMQHNRKP   ++PA
Sbjct:   87 MPSIEVGTVGGGTHLPAQSGCLDICGVRGASRVAA--GDNARQLAQIVGASVLAGELSLMAALAANHLVRSHMQHNRKPAAPAEPA 170          
BLAST of mRNA_S-firma_M_contig9280.20231.1 vs. uniprot
Match: A0A7S1Y0Q7_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y0Q7_9STRA)

HSP 1 Score: 109 bits (273), Expect = 2.460e-26
Identity = 57/78 (73.08%), Postives = 67/78 (85.90%), Query Frame = 0
Query:    1 MPSIEVGTVGGGTSLPAQAACLDVVGCRGATQAPGRPGENAQQMAKVVAGATLAGELSLVAALASNQLVRAHMQHNRK 78
            MPS+EVGTVGGGTSLPAQ ACL+V+   GA++AP  PG NAQ ++K +AGA LAGE+SL+AALASNQLVRAHM HNRK
Sbjct:  366 MPSLEVGTVGGGTSLPAQRACLEVMNVAGASRAPKAPGTNAQALSKAIAGAVLAGEMSLMAALASNQLVRAHMIHNRK 443          
BLAST of mRNA_S-firma_M_contig9280.20231.1 vs. uniprot
Match: A0A7S4ALR6_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ALR6_9STRA)

HSP 1 Score: 107 bits (266), Expect = 4.980e-25
Identity = 57/79 (72.15%), Postives = 66/79 (83.54%), Query Frame = 0
Query:    1 MPSIEVGTVGGGTSLPAQAACLDVVGCRGATQAPGRPGENAQQMAKVVAGATLAGELSLVAALASNQLVRAHMQHNRKP 79
            MPSIEVGTVGGGTSLPAQAACL+ +GC+G    PG    NAQ++A VVA AT+AGELSL+AALA+N LV+AHM HNRKP
Sbjct:  555 MPSIEVGTVGGGTSLPAQAACLEAIGCKGGGSTPGA---NAQKLATVVAAATMAGELSLLAALAANTLVQAHMVHNRKP 630          
BLAST of mRNA_S-firma_M_contig9280.20231.1 vs. uniprot
Match: A0A7S3GVF0_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GVF0_9STRA)

HSP 1 Score: 106 bits (264), Expect = 9.250e-25
Identity = 56/88 (63.64%), Postives = 70/88 (79.55%), Query Frame = 0
Query:    1 MPSIEVGTVGGGTSLPAQAACLDVVGCRGATQAPG-RPGENAQQMAKVVAGATLAGELSLVAALASNQLVRAHMQHNRKPQLQSQPAA 87
            MPSIEVGTVGGGT LPAQA CL++ G RGA + PG +PG+NA+++A++V  A LA ELSL+AALA+N LV +HMQHNRKP     PA+
Sbjct:  519 MPSIEVGTVGGGTHLPAQAGCLEICGVRGAAKGPGAQPGDNARKLAQIVGAAVLAAELSLMAALAANHLVNSHMQHNRKPAEAPAPAS 606          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9280.20231.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUE2_ECTSI1.780e-4697.59Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Ta... [more]
A0A835YX65_9STRA1.390e-3282.503-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]
A0A7S2FDH1_9STRA1.620e-2969.323-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]
A0A7S0ST55_9STRA3.390e-2870.00Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Ta... [more]
A0A1E7FDJ4_9STRA8.460e-2873.42Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Ta... [more]
A0A7S1CUP3_9STRA4.550e-2770.89Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Ta... [more]
A0A812U1Q8_SYMMI1.820e-2663.95Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Ta... [more]
A0A7S1Y0Q7_9STRA2.460e-2673.083-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]
A0A7S4ALR6_9STRA4.980e-2572.153-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]
A0A7S3GVF0_9STRA9.250e-2563.643-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002202Hydroxymethylglutaryl-CoA reductase, class I/IIPFAMPF00368HMG-CoA_redcoord: 1..77
e-value: 1.1E-25
score: 90.5
IPR002202Hydroxymethylglutaryl-CoA reductase, class I/IIPANTHERPTHR105723-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASEcoord: 1..85
IPR002202Hydroxymethylglutaryl-CoA reductase, class I/IIPROSITEPS50065HMG_COA_REDUCTASE_4coord: 1..77
score: 23.144
IPR023074Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamilyGENE3D3.90.770.10coord: 1..80
e-value: 5.3E-30
score: 106.5
NoneNo IPR availablePANTHERPTHR10572:SF23-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASEcoord: 1..85
IPR023076Hydroxymethylglutaryl-CoA reductase, class I/II, conserved sitePROSITEPS00318HMG_COA_REDUCTASE_2coord: 6..13
IPR023076Hydroxymethylglutaryl-CoA reductase, class I/II, conserved sitePROSITEPS01192HMG_COA_REDUCTASE_3coord: 62..75
IPR009029Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamilySUPERFAMILY56542Substrate-binding domain of HMG-CoA reductasecoord: 1..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9280contigS-firma_M_contig9280:165..1015 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9280.20231.1mRNA_S-firma_M_contig9280.20231.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9280 165..1015 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9280.20231.1 ID=prot_S-firma_M_contig9280.20231.1|Name=mRNA_S-firma_M_contig9280.20231.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=92bp
MPSIEVGTVGGGTSLPAQAACLDVVGCRGATQAPGRPGENAQQMAKVVAG
ATLAGELSLVAALASNQLVRAHMQHNRKPQLQSQPAAATST*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009029HMG_CoA_Rdtase_sub-bd_dom_sf
IPR023076HMG_CoA_Rdtase_CS
IPR023074HMG_CoA_Rdtase_cat_sf
IPR002202HMG_CoA_Rdtase