prot_S-firma_M_contig9247.20193.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9247.20193.1
Unique Nameprot_S-firma_M_contig9247.20193.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length568
Homology
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BLAST of mRNA_S-firma_M_contig9247.20193.1 vs. uniprot
Match: A0A6H5J8H8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8H8_9PHAE)

HSP 1 Score: 300 bits (767), Expect = 1.730e-85
Identity = 184/311 (59.16%), Postives = 211/311 (67.85%), Query Frame = 0 
Query:  250 EAAEEGPVV-ANADVNGEVAPPLSSLPNQAGAXXXXXXXXXXGGTQLLSRPPQGTFFEAHLPWGKRRRVSGNLRWKMGQRARQSRQV--------------FCAAEGRELVMYDSECDSNAGLPPRGRYLVMGVRSVKNGPGSLELDVTVADDCELVTLGWSGNAAAAAPGLAFVETRSVTLTAPGRHEHARWALALEEAHSWTEQKEREALMEELELSLPFRESAIEHVQDFLPQGTIEDVLGVSAARNNPGCVLKSMVFDAAEAAASA------GPLSSPSPEVPGSGGPGIG--VRKLSGPPSASLRG 537
            E  E+ PVV A A    + APP + + +  G+             Q    PPQG F EAHLPWGKRRR+SGNLR K+    R +R+V              FCAAEGRELV+YD+E DSNAGLPPR RYLVMGVR++K GP + EL+VTVAD+ E+ +LGW   A+   PG+AFVETRSVTLTA GRHEHARW+LALEEA SWTE+KEREAL+EELELSLPFRE AIEHV   LP  TIED+LGVS A  NPGCVLKS+VFDAAEAAASA      GPLSSP     GS         RKL+  PSASLRG
Sbjct:  311 ERGEDRPVVPAGAKTGADAAPPGAGV-DWGGSGGVTTVP------QARPTPPQGPFLEAHLPWGKRRRMSGNLRLKISGGGRVARRVATSGGREWGVWGGVFCAAEGRELVVYDAESDSNAGLPPRARYLVMGVRALKTGPNAAELEVTVADESEVSSLGWRERASTG-PGVAFVETRSVTLTASGRHEHARWSLALEEAQSWTEKKEREALLEELELSLPFREYAIEHVHHRLPDSTIEDILGVSTAMTNPGCVLKSVVFDAAEAAASAAEAAAPGPLSSPELTA-GSXXXXXXXXTRKLTVAPSASLRG 612
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BLAST of mRNA_S-firma_M_contig9247.20193.1 vs. uniprot
Match: D8LRB4_ECTSI (Cell surface protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB4_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 6.090e-43
Identity = 91/127 (71.65%), Postives = 104/127 (81.89%), Query Frame = 0 
Query:  366 MGVRSVKNGPGSLELDVTVADDCELVTLGWSGNAAAAAPGLAFVETRSVTLTAPGRHEHARWALALEEAHSWTEQKEREALMEELELSLPFRESAIEHVQDFLPQGTIEDVLGVSAARNNPGCVLKS 492
            MGVR++K GP + EL+VTVAD+ E+ +LGW   A+   PG+AFVETRSVTLTA GRHEHARW+LALEEA SWTE+KEREAL+EELELSLPFRE AIEHV   LP   IED+LGVS A  NPGCVLKS
Sbjct:    1 MGVRALKTGPNAAELEVTVADESEVSSLGWRERASTG-PGVAFVETRSVTLTAYGRHEHARWSLALEEAQSWTEKKEREALLEELELSLPFREYAIEHVHHRLPDSAIEDILGVSTAMTNPGCVLKS 126
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BLAST of mRNA_S-firma_M_contig9247.20193.1 vs. uniprot
Match: D8LRB3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB3_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 2.400e-7
Identity = 29/38 (76.32%), Postives = 33/38 (86.84%), Query Frame = 0 
Query:    1 QASEELYRLVDSSHQTSYDCFNPVFASICQFQEASYSH 38
            QASEEL RLV  SHQ+S+DC +PVFASICQFQEASY +
Sbjct:  155 QASEELSRLVVISHQSSHDCLDPVFASICQFQEASYRY 192
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9247.20193.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5J8H8_9PHAE1.730e-8559.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRB4_ECTSI6.090e-4371.65Cell surface protein n=1 Tax=Ectocarpus siliculosu... [more]
D8LRB3_ECTSI2.400e-776.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 230..255

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9247contigS-firma_M_contig9247:132..3737 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9247.20193.1mRNA_S-firma_M_contig9247.20193.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9247 132..3737 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9247.20193.1 ID=prot_S-firma_M_contig9247.20193.1|Name=mRNA_S-firma_M_contig9247.20193.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=568bp
QASEELYRLVDSSHQTSYDCFNPVFASICQFQEASYSHGHLLSSMLLRVV
QSSLGTTALPLATASADPGMMATAVPSSSSPLQESEGEGVLRWRHDEAQD
GGNVDAGNDATADAAAAAAAAADRGVGEGGGAGGDAGGDGDVDGAAAGDG
VACGAERDGSDGGNGGGGDGDGDAHGAAAGADGAGGSAQPDDCSPRDAGR
APQDRQGHEKLGHVDPVPGEEERPDAAAETKAEEEQQEEKEGEREKEEVE
AAEEGPVVANADVNGEVAPPLSSLPNQAGAAAAAGGGGGWGGTQLLSRPP
QGTFFEAHLPWGKRRRVSGNLRWKMGQRARQSRQVFCAAEGRELVMYDSE
CDSNAGLPPRGRYLVMGVRSVKNGPGSLELDVTVADDCELVTLGWSGNAA
AAAPGLAFVETRSVTLTAPGRHEHARWALALEEAHSWTEQKEREALMEEL
ELSLPFRESAIEHVQDFLPQGTIEDVLGVSAARNNPGCVLKSMVFDAAEA
AASAGPLSSPSPEVPGSGGPGIGVRKLSGPPSASLRGWVERLSIFDTSAR
SPPPGGDDASGGGYLSGG
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