prot_S-firma_M_contig924.20188.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig924.20188.1
Unique Nameprot_S-firma_M_contig924.20188.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length99
Homology
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BLAST of mRNA_S-firma_M_contig924.20188.1 vs. uniprot
Match: D8LEG9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEG9_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 2.840e-15
Identity = 49/93 (52.69%), Postives = 57/93 (61.29%), Query Frame = 0 
Query:    1 RRADEAERDAKDERRLRSLA-PAXXXXXXXXXXXXXXXXXXXXXXXXVDDAAALRRKLKLATSEIEALRTHTTDLRNQIQSGWWSWGAAASEV 92
            RRAD A+ +A+DERRLRSLA PA                          D AALRRKL+LA  EIEALRTHT DLR+Q+QSGWWSW  ++SE 
Sbjct:  136 RRADAAQLEARDERRLRSLAAPAGGGDGSSNSSIQGYTINCATKG----DEAALRRKLELAAGEIEALRTHTRDLRSQVQSGWWSWRPSSSEA 224
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig924.20188.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEG9_ECTSI2.840e-1552.69Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 50..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig924contigS-firma_M_contig924:25360..25656 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig924.20188.1mRNA_S-firma_M_contig924.20188.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig924 25360..25656 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig924.20188.1 ID=prot_S-firma_M_contig924.20188.1|Name=mRNA_S-firma_M_contig924.20188.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=99bp
RRADEAERDAKDERRLRSLAPAAAAAAAASGGRSTIITRDDDNSDGVDDA
AALRRKLKLATSEIEALRTHTTDLRNQIQSGWWSWGAAASEVATGGQGD
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