prot_S-firma_M_contig924.20187.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig924.20187.1
Unique Nameprot_S-firma_M_contig924.20187.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length262
Homology
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BLAST of mRNA_S-firma_M_contig924.20187.1 vs. uniprot
Match: D8LEH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEH0_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 3.560e-22
Identity = 78/143 (54.55%), Postives = 91/143 (63.64%), Query Frame = 0 
Query:   17 GKEARRLYLLLEEQGLEVVALRQRVLKAEIVARARGKDL-DQARLMIDRLKGRRHGGDCGGAVWRIPGAAGGGAGGVASAAAGRKSE-FVDNASLAEMEGRMAALHAEGNHGQALAAAREAVSALKLALVRSEGEAELQAQLL 157
            GKEARRL+ LLEEQGLEVVALRQRVLKAEIVAR R     D+ R   +  K R                  GG  GV    +  K++  V++A LAEMEGR+A LHA G+  +AL  ARE VSALKLAL+R+EGE EL AQLL
Sbjct:  302 GKEARRLHRLLEEQGLEVVALRQRVLKAEIVARTRDSGRHDEERWAKEEAKER------------------GGLKGVGVEGSSTKTQKLVESAVLAEMEGRVADLHARGDTREALMVARETVSALKLALIRTEGEVELHAQLL 426
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BLAST of mRNA_S-firma_M_contig924.20187.1 vs. uniprot
Match: D8LEG9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEG9_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 1.900e-19
Identity = 52/71 (73.24%), Postives = 62/71 (87.32%), Query Frame = 0 
Query:  181 VAVEETLRGVSGGAVSAVALIDRFAGTLFRQSRRVKDLEEEVRTMRTRCGRLARLARGDSADACSPATAIA 251
            +AVE+TL GV+GG VSA+ALIDRFAGTL+RQSRRVKD+E++V TMR RC RLARLARGD+AD  SP+ A A
Sbjct:    1 MAVEKTLDGVAGGTVSALALIDRFAGTLYRQSRRVKDMEDQVWTMRNRCARLARLARGDTADGGSPSGAAA 71
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig924.20187.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEH0_ECTSI3.560e-2254.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LEG9_ECTSI1.900e-1973.24Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 208..235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig924contigS-firma_M_contig924:22709..24467 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig924.20187.1mRNA_S-firma_M_contig924.20187.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig924 22709..24469 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig924.20187.1 ID=prot_S-firma_M_contig924.20187.1|Name=mRNA_S-firma_M_contig924.20187.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=262bp
GGGGGAGGAGGGARGSGKEARRLYLLLEEQGLEVVALRQRVLKAEIVARA
RGKDLDQARLMIDRLKGRRHGGDCGGAVWRIPGAAGGGAGGVASAAAGRK
SEFVDNASLAEMEGRMAALHAEGNHGQALAAAREAVSALKLALVRSEGEA
ELQAQLLEDERGRSMAALSRAEDLQGRLDRVAVEETLRGVSGGAVSAVAL
IDRFAGTLFRQSRRVKDLEEEVRTMRTRCGRLARLARGDSADACSPATAI
AGTGERASAADE
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