prot_S-firma_M_contig922.20165.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig922.20165.1
Unique Nameprot_S-firma_M_contig922.20165.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length670
Homology
BLAST of mRNA_S-firma_M_contig922.20165.1 vs. uniprot
Match: D7FIT8_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIT8_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 2.640e-19
Identity = 50/88 (56.82%), Postives = 59/88 (67.05%), Query Frame = 0
Query:  507 PEAPGRAAGVRVQSEGRAEVSGGDVGKKLPACLRRRRRGSSIACPVCLDVFQEQEVITLVTCGHAFHWKCVEPWLERSARCPCCRQDL 594
            P  P R   +R+ S+ R   +    G   PAC R  R GSS+ACPVCL+ FQ Q+V+TLVTCGHAFH  C+E WLERSARCPCCR  L
Sbjct:  290 PGVPCRPGSLRLLSDKRLSEARNRRGGMFPAC-RPPRGGSSVACPVCLEAFQAQDVVTLVTCGHAFHRSCIERWLERSARCPCCRWSL 376          
BLAST of mRNA_S-firma_M_contig922.20165.1 vs. uniprot
Match: A0A6H5JFB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFB9_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 1.510e-12
Identity = 45/94 (47.87%), Postives = 56/94 (59.57%), Query Frame = 0
Query:    1 MTLVFLRSIYLTRDGFFADDEDDADDRNDHSLSGQTPGERVEFRRQQEADL-EAGLGRRGSSGQRRPREGQEEEEDLEGLFWDVELVFPARRQN 93
            MTL FLRSIYLTRD F  DD ++ D  ND SLS   P +   F+RQ E  + EAG        +R+    +   E+ +GLFWD ELVFP RR+N
Sbjct:   21 MTLGFLRSIYLTRDTFVLDDNEEDDGGNDQSLSMDQPADDPRFQRQNEPGMAEAGRXXXXXXXRRQQHAAEAAGEERDGLFWDFELVFPTRRRN 114          
BLAST of mRNA_S-firma_M_contig922.20165.1 vs. uniprot
Match: A0A4S8JXA1_MUSBA (RING-type domain-containing protein n=5 Tax=Musaceae TaxID=4637 RepID=A0A4S8JXA1_MUSBA)

HSP 1 Score: 66.6 bits (161), Expect = 6.290e-9
Identity = 24/45 (53.33%), Postives = 31/45 (68.89%), Query Frame = 0
Query:  550 CPVCLDVFQEQEVITLVTCGHAFHWKCVEPWLERSARCPCCRQDL 594
            C VCL+ FQE +++  + C H FHW CV PWLE S+ CPCCR  +
Sbjct:  144 CAVCLEDFQEGDMLVHLPCAHRFHWNCVLPWLESSSHCPCCRMTI 188          
BLAST of mRNA_S-firma_M_contig922.20165.1 vs. uniprot
Match: A0A6A6MA44_HEVBR (RING-type domain-containing protein n=2 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6MA44_HEVBR)

HSP 1 Score: 65.5 bits (158), Expect = 1.820e-8
Identity = 21/46 (45.65%), Postives = 32/46 (69.57%), Query Frame = 0
Query:  550 CPVCLDVFQEQEVITLVTCGHAFHWKCVEPWLERSARCPCCRQDLN 595
            C +CL+ F+  E +  + C H FHW+C+ PWLE +A CPCCR +++
Sbjct:  149 CTICLERFKSGETLAHLPCAHRFHWRCLVPWLENNAHCPCCRMEIH 194          
BLAST of mRNA_S-firma_M_contig922.20165.1 vs. uniprot
Match: A0A210QL05_MIZYE (E3 ubiquitin-protein ligase n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QL05_MIZYE)

HSP 1 Score: 62.0 bits (149), Expect = 1.040e-7
Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = 0
Query:  550 CPVCLDVFQEQEVITLVTCGHAFHWKCVEPWLERSARCPCCRQDL 594
            CPVCL +F E++ +  + CGH FH KC+ PWLE+   CP CR +L
Sbjct:   72 CPVCLGLFDEEDELREMPCGHKFHSKCILPWLEKVNSCPLCRHEL 116          
BLAST of mRNA_S-firma_M_contig922.20165.1 vs. uniprot
Match: UPI000B45CA24 (E3 ubiquitin-protein ligase RNF181-like n=2 Tax=Pectinidae TaxID=6566 RepID=UPI000B45CA24)

HSP 1 Score: 62.0 bits (149), Expect = 1.210e-7
Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = 0
Query:  550 CPVCLDVFQEQEVITLVTCGHAFHWKCVEPWLERSARCPCCRQDL 594
            CPVCL +F E++ +  + CGH FH KC+ PWLE+   CP CR +L
Sbjct:   79 CPVCLGLFDEEDELREMPCGHKFHSKCILPWLEKVNSCPLCRHEL 123          
BLAST of mRNA_S-firma_M_contig922.20165.1 vs. uniprot
Match: A0A7S2QAZ6_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2QAZ6_9DINO)

HSP 1 Score: 60.1 bits (144), Expect = 1.770e-7
Identity = 19/47 (40.43%), Postives = 34/47 (72.34%), Query Frame = 0
Query:  550 CPVCLDVFQEQEVITLVTCGHAFHWKCVEPWLERSARCPCCRQDLNA 596
            C +CL+ +Q+ +++T + CGH FH +C+  W++R+ +CP CRQ+  A
Sbjct:   22 CAICLEAYQQGQLLTALRCGHFFHVECLSHWMQRATQCPLCRQECGA 68          
BLAST of mRNA_S-firma_M_contig922.20165.1 vs. uniprot
Match: UPI001C500A7A (probable E3 ubiquitin-protein ligase RHY1A isoform X1 n=2 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C500A7A)

HSP 1 Score: 62.4 bits (150), Expect = 2.250e-7
Identity = 24/49 (48.98%), Postives = 31/49 (63.27%), Query Frame = 0
Query:  543 RRGSSIACPVCLDVFQEQEVITLVTCGHAFHWKCVEPWLERSARCPCCR 591
            R      C VCL+ F++ E +  +TC H FH +C+ PWLE SA CPCCR
Sbjct:  151 RASDQDGCAVCLEGFKDGETLLHLTCAHRFHSRCLVPWLESSAHCPCCR 199          
BLAST of mRNA_S-firma_M_contig922.20165.1 vs. uniprot
Match: A0A1U8ARR8_NELNU (probable E3 ubiquitin-protein ligase RHY1A n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8ARR8_NELNU)

HSP 1 Score: 62.0 bits (149), Expect = 2.610e-7
Identity = 22/45 (48.89%), Postives = 30/45 (66.67%), Query Frame = 0
Query:  550 CPVCLDVFQEQEVITLVTCGHAFHWKCVEPWLERSARCPCCRQDL 594
            C VCL+ F+  E +  + CGH FH +C+ PWLE +A CPCCR  +
Sbjct:  149 CTVCLEQFKSGEALVQLPCGHRFHSRCLVPWLENNAHCPCCRMGI 193          
BLAST of mRNA_S-firma_M_contig922.20165.1 vs. uniprot
Match: A0A2G5DQX0_AQUCA (RING-type domain-containing protein n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5DQX0_AQUCA)

HSP 1 Score: 61.6 bits (148), Expect = 3.540e-7
Identity = 23/45 (51.11%), Postives = 30/45 (66.67%), Query Frame = 0
Query:  550 CPVCLDVFQEQEVITLVTCGHAFHWKCVEPWLERSARCPCCRQDL 594
            C VCL+ F+  E +  + C H FH +C+ PWLE SA CPCCR D+
Sbjct:  145 CAVCLERFKSGETLLHLPCAHRFHSRCLVPWLENSAHCPCCRTDV 189          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig922.20165.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIT8_ECTSI2.640e-1956.82RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JFB9_9PHAE1.510e-1247.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4S8JXA1_MUSBA6.290e-953.33RING-type domain-containing protein n=5 Tax=Musace... [more]
A0A6A6MA44_HEVBR1.820e-845.65RING-type domain-containing protein n=2 Tax=Hevea ... [more]
A0A210QL05_MIZYE1.040e-751.11E3 ubiquitin-protein ligase n=1 Tax=Mizuhopecten y... [more]
UPI000B45CA241.210e-751.11E3 ubiquitin-protein ligase RNF181-like n=2 Tax=Pe... [more]
A0A7S2QAZ6_9DINO1.770e-740.43Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
UPI001C500A7A2.250e-748.98probable E3 ubiquitin-protein ligase RHY1A isoform... [more]
A0A1U8ARR8_NELNU2.610e-748.89probable E3 ubiquitin-protein ligase RHY1A n=1 Tax... [more]
A0A2G5DQX0_AQUCA3.540e-751.11RING-type domain-containing protein n=1 Tax=Aquile... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 550..590
e-value: 1.6E-6
score: 37.6
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 549..591
e-value: 1.7E-11
score: 44.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 550..591
score: 13.271
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 541..635
e-value: 1.2E-16
score: 62.5
NoneNo IPR availablePANTHERPTHR22765:SF145coord: 243..617
NoneNo IPR availablePANTHERPTHR22765RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAININGcoord: 243..617
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 545..598

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig922contigS-firma_M_contig922:3395..8279 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig922.20165.1mRNA_S-firma_M_contig922.20165.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig922 3395..8294 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig922.20165.1 ID=prot_S-firma_M_contig922.20165.1|Name=mRNA_S-firma_M_contig922.20165.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=670bp
MTLVFLRSIYLTRDGFFADDEDDADDRNDHSLSGQTPGERVEFRRQQEAD
LEAGLGRRGSSGQRRPREGQEEEEDLEGLFWDVELVFPARRQNRRRNTVP
DSGGGNNNNAMAAAAAADGTPVGMSVGNGRRRFWLSGLLFGRDAPAAAQP
PRTADFLEGGNFVGQRRGQGAGMGVGGGGGQRAGALDPLTRKSFVHFVAK
AGDGFAPPPAGGPEAAAFATTPPSARVAAALEEQEGPGPGEPGLRTPDGR
PQKQCGSNGSQQPCHNAETEDGRDGERTPNSNPTSPAEPGEDGASAAVGG
RSREADSASLLEGHGHEEWKDGEHRSAAAAEDTGTEDALSPGRGQRRPAS
PGRTEDRAGGSAGRERSAPMPGGSVTEGQGRGVSPRQVAARLEHRAEQEE
EKGEGGGGHDTPVAGAGESESSGGRAVARESGAPDVGDEGGAENEGMQEG
ARTAESVIGASLAAGAAAGAAASGGVDAHRPAEVLDGTAGVTVPDGAAGA
GAAGVTPEAPGRAAGVRVQSEGRAEVSGGDVGKKLPACLRRRRRGSSIAC
PVCLDVFQEQEVITLVTCGHAFHWKCVEPWLERSARCPCCRQDLNALTSN
LLKSTEQRNSSGWQQQQQQQQQQQQQQQRQEQQLPPNPSEAPPPPPPPPP
PPPPPPPATGPAQATLVLDH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING