prot_S-firma_M_contig919.20134.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig919.20134.1
Unique Nameprot_S-firma_M_contig919.20134.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length474
Homology
BLAST of mRNA_S-firma_M_contig919.20134.1 vs. uniprot
Match: A0A6H5K3E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3E6_9PHAE)

HSP 1 Score: 359 bits (921), Expect = 2.210e-116
Identity = 247/476 (51.89%), Postives = 296/476 (62.18%), Query Frame = 0
Query:    1 GLAARVKAGQPAFAWDDPTAVYSSPGGINGKAPANEAPSTEDEGVRRDPRNIGRPAFYDREALREQIKALQDENRDLSNKEVDLGLRLTKAQATLSGMRTKKRALSEEKILDEAASVVPAKGKSAGRIAHPWGEKYRDSSSNGEGASKRHEARDQQRQEKTNFAAQDRIMELELLNDQLRKGQGEAERQAKSQQAASDAARADVQRVLQRLKAMPKRFTQSLPSLRDEVDRLEREKLSLELAKQQKTLKEADLLAAAKRQQGYLREELASLLDEIDDVEEDRERWKRRLRVESTRAGSLRSQRDEALGALRQRFGGDAVERAAFAFFSN--------TRNKTRVGGRGGAEWGGRQRARGDVPIDEAGDDDLAGMTSGRFGDGIDDDGECPTIPASMIAKALKPAYGPDCGYASDGGGEGSAAVVLTAEXXXXXXXXXXXXXXXIKSEGEDRQGLRLTFEEFLAVAERLTRRGVDH 468
            GL ARV AG+P +AWDDP        G    A   E      +  R       +  FYD+EAL+EQ++ L+ E  DLS KE  LG RL KAQATLS MR K   LS+ K+LDE  SV PA+           G+K+R+S SNG+   +R EAR QQR E+TNFAAQDR+MELELLN QLRKGQ EAER AK Q+A   + RA+V +V +RLKAMPKRFTQSL SL+DEV+ LEREK  LELAK++KT KEADLLA+AKRQQ YL EEL+SLLDEIDDVE+DR+RWKRRLRVE+TR  SLRSQR+EAL ALR+RFG DAVER AFA F+             +R G RGG   G  +    D    E GD D           G  D G  P I  SMI+KALKP YGPDC +  DGGGEG A  +LT E                K   +   G+ + ++EF A+A+RL  R + H
Sbjct:   17 GLVARVNAGKPVYAWDDP--------GTRPGASLKEGGKVGRDHNRHLRHQNTQAPFYDKEALQEQLQGLRAEGIDLSEKEARLGFRLAKAQATLSRMREKMVGLSQAKMLDEVMSVFPARAADVS-----VGKKHRESESNGDYGGRR-EARSQQRHEETNFAAQDRVMELELLNSQLRKGQAEAERNAKLQEATFRSTRAEVNKVAERLKAMPKRFTQSLQSLQDEVETLEREKFDLELAKERKTSKEADLLASAKRQQSYLGEELSSLLDEIDDVEDDRDRWKRRLRVETTRTESLRSQREEALRALRERFGSDAVERVAFARFATGPKGSGKGLMTLSRRGRRGGRGTGSDRDEEDDY---EDGDHDSGERDDSGERGGFSDLGS-PKILVSMISKALKPVYGPDCDH--DGGGEGFA--LLTDEAVAEAALSECGIDCSEKEAADVEGGVGVGYDEFRAIAKRLVERRMAH 470          
BLAST of mRNA_S-firma_M_contig919.20134.1 vs. uniprot
Match: D7G7D4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7D4_ECTSI)

HSP 1 Score: 349 bits (896), Expect = 9.590e-113
Identity = 246/471 (52.23%), Postives = 292/471 (62.00%), Query Frame = 0
Query:    1 GLAARVKAGQPAFAWDDPTAVYSSPGGINGKAPANEAPSTEDEGVRRDPRNIGRPAFYDREALREQIKALQDENRDLSNKEVDLGLRLTKAQATLSGMRTKKRALSEEKILDEAASVVPAKGKSAGRIAHPWGEKYRDSSSNGEGASKRHEARDQQRQEKTNFAAQDRIMELELLNDQLRKGQGEAERQAKSQQAASDAARADVQRVLQRLKAMPKRFTQSLPSLRDEVDRLEREKLSLELAKQQKTLKEADLLAAAKRQQGYLREELASLLDEIDDVEEDRERWKRRLRVESTRAGSLRSQRDEALGALRQRFGGDAVERAAFAFFSNTRNKTRVGG------RGGAEWGGRQRARGDVPIDEAGDDDLAGMTSGRFGDGIDDDG-ECPTIPASMIAKALKPAYGPDCGYASDGGGEGSAAVVLTAEXXXXXXXXXXXXXXXIKSEGEDRQGLRLTFEEFLAVAERLTRR 464
            GL ARVKAG+P +AWDDP     +     GKA  +       +          +  FYD+EAL+EQ++ LQ E  DLS KE  LGLRL KAQATLS MR KK  LS+ K+LDE  SV PAK   A  I+   G K+R+S SNG+G  +R EAR QQR E+TNFAAQDR+MELELLN QLRKGQ EAER AK Q+    + RA+V +V +RLKAMPKRFTQSL SLRDEV+ LEREK +LELAK++KT KEADL+A+AKRQQ YL EEL SLLDEIDDVE+DR+RWKRRLRVE+TRA SLRSQRDEAL ALR+RFG DAVERAAFA F+     +   G      RG                   G             +     G   P IP SMI+KALKP YGPD  Y  DGGGEG A +   A                  +E E   G+ + ++EF A+A+RL  R
Sbjct:    4 GLVARVKAGKPVYAWDDPGTRPGASLEERGKAGRHHNRHLRYQN--------NQAPFYDKEALQEQLQGLQAEGIDLSEKETHLGLRLAKAQATLSKMREKKVGLSQAKMLDEVMSVFPAK---AADIS--VGRKHRESESNGDGGGRR-EARSQQRHEETNFAAQDRVMELELLNSQLRKGQAEAERNAKLQEDTFRSTRAEVNKVAERLKAMPKRFTQSLQSLRDEVETLEREKFNLELAKERKTSKEADLIASAKRQQSYLGEELKSLLDEIDDVEDDRDRWKRRLRVETTRAESLRSQRDEALRALRERFGSDAVERAAFARFATAPKGSGGDGLMALSRRGWXXXXXXXXXXXXXXXXXYGXXXXXXXXXXXXXEKGGFSGLRSPKIPVSMISKALKPVYGPD--YDHDGGGEGFALLTEEAVGEAVLSECGIDCSAMEATEVEG-GGVGVGYDEFRAIAKRLVER 457          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig919.20134.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K3E6_9PHAE2.210e-11651.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7D4_ECTSI9.590e-11352.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 60..80
NoneNo IPR availableCOILSCoilCoilcoord: 222..254
NoneNo IPR availableCOILSCoilCoilcoord: 268..295
NoneNo IPR availableCOILSCoilCoilcoord: 88..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig919contigS-firma_M_contig919:9892..12302 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig919.20134.1mRNA_S-firma_M_contig919.20134.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig919 9892..12302 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig919.20134.1 ID=prot_S-firma_M_contig919.20134.1|Name=mRNA_S-firma_M_contig919.20134.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=474bp
GLAARVKAGQPAFAWDDPTAVYSSPGGINGKAPANEAPSTEDEGVRRDPR
NIGRPAFYDREALREQIKALQDENRDLSNKEVDLGLRLTKAQATLSGMRT
KKRALSEEKILDEAASVVPAKGKSAGRIAHPWGEKYRDSSSNGEGASKRH
EARDQQRQEKTNFAAQDRIMELELLNDQLRKGQGEAERQAKSQQAASDAA
RADVQRVLQRLKAMPKRFTQSLPSLRDEVDRLEREKLSLELAKQQKTLKE
ADLLAAAKRQQGYLREELASLLDEIDDVEEDRERWKRRLRVESTRAGSLR
SQRDEALGALRQRFGGDAVERAAFAFFSNTRNKTRVGGRGGAEWGGRQRA
RGDVPIDEAGDDDLAGMTSGRFGDGIDDDGECPTIPASMIAKALKPAYGP
DCGYASDGGGEGSAAVVLTAEAVAEAVASECGADCSIKSEGEDRQGLRLT
FEEFLAVAERLTRRGVDHTTRSD*
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