prot_S-firma_M_contig9169.20109.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9169.20109.1
Unique Nameprot_S-firma_M_contig9169.20109.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length84
Homology
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BLAST of mRNA_S-firma_M_contig9169.20109.1 vs. uniprot
Match: D8LQH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH1_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 5.430e-15
Identity = 39/43 (90.70%), Postives = 41/43 (95.35%), Query Frame = 0 
Query:    1 MKTLKKKFSIYQSSQKVRKLWCDYSEAKSAVASPFSSSTTSAE 43
            MKTLKKKFSIYQSSQKVRKLWCDYSEAKS + SP+SSSTTSAE
Sbjct:    1 MKTLKKKFSIYQSSQKVRKLWCDYSEAKSGIESPYSSSTTSAE 43
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BLAST of mRNA_S-firma_M_contig9169.20109.1 vs. uniprot
Match: A0A6H5K3Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Z3_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 3.120e-5
Identity = 23/29 (79.31%), Postives = 27/29 (93.10%), Query Frame = 0 
Query:   15 QKVRKLWCDYSEAKSAVASPFSSSTTSAE 43
            ++VRKLWCDYSEAKS + SP+SSSTTSAE
Sbjct:   21 KQVRKLWCDYSEAKSGIESPYSSSTTSAE 49
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9169.20109.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQH1_ECTSI5.430e-1590.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K3Z3_9PHAE3.120e-579.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9169contigS-firma_M_contig9169:2129..3470 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9169.20109.1mRNA_S-firma_M_contig9169.20109.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9169 2070..3470 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9169.20109.1 ID=prot_S-firma_M_contig9169.20109.1|Name=mRNA_S-firma_M_contig9169.20109.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=84bp
MKTLKKKFSIYQSSQKVRKLWCDYSEAKSAVASPFSSSTTSAEKGEGEGE
GEGDDFDAAAAAAAATPTSTSTSTSVPSSGSIDL
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