prot_S-firma_M_contig9165.20107.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9165.20107.1
Unique Nameprot_S-firma_M_contig9165.20107.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length379
Homology
BLAST of mRNA_S-firma_M_contig9165.20107.1 vs. uniprot
Match: D8LJ87_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ87_ECTSI)

HSP 1 Score: 506 bits (1304), Expect = 9.560e-176
Identity = 286/388 (73.71%), Postives = 322/388 (82.99%), Query Frame = 0
Query:    1 SRKRSGLCLFFSESWSFFLPITLLYLIAMASMANKLKDTNDAFKIRNEIGYICVATAVTSATRTVHISLL--SWWGGVNETFPPTVHDLIACSAALYVSFYRPLKAFYGVGSRRSLRGIHSARRIYSGDDEDGYDXXXXXXXXXXXXKGGGWGDENKPETWGVIQMLRNGTLRGLLINFCEQSLCGESVDFLVDVAINYESLTDPEEQFGALAEIVEHYLAQGSANEVNVSNAYRNAAAAWLTKRDEFLALQLEKRAHVLDRQRDEIAKMLGENLLARFKKIPMAINAMRALKEVAAADSSL-GEEGGDHEDEGMRIMLQASAALEVARIQRITRVE------SPGAG-GGRNSVVALR---RKSGSSSFEDGSFDGSDSFTMYTLET 375
            +R  +G CLFF E WSFF P TLLYL+AMA+MANKLK+TNDAFKIR+EI Y+CVATA+TSATRTVH SL   +WWG ++ETFPPTV+DL ACSA LY+SFYRPLKAFYGVGS RSL GIH+ARRIYSGD      XXXXXXXXXXXX    WGDE KPETWGV+QMLRNGTLRGLLINFCE+SLCGESVDFLVDV INYESL+DP+EQFGAL++IVE+YLA+GSANEVNVSNAYRNAAA WLTKR+EFLAL+ E RAHVLD QRDEIAKML ENLL +FK+ P+ + AMRALKEVAA +++L GEEG + EDEGMRIMLQASAA EVARIQRITRV       SPG G GG NS   +    R    SSFED SFDGS SFTMY+++T
Sbjct:   94 ARSNAGQCLFFDERWSFFFPTTLLYLMAMAAMANKLKNTNDAFKIRDEICYVCVATAITSATRTVHTSLAHTTWWGDLDETFPPTVNDLGACSAVLYISFYRPLKAFYGVGSHRSLHGIHAARRIYSGDXXXXXXXXXXXXXXXXXXX---WGDERKPETWGVLQMLRNGTLRGLLINFCEESLCGESVDFLVDVTINYESLSDPDEQFGALSDIVENYLAEGSANEVNVSNAYRNAAALWLTKREEFLALEEETRAHVLDLQRDEIAKMLAENLLVKFKQAPLTVAAMRALKEVAAGENTLFGEEGSEVEDEGMRIMLQASAAAEVARIQRITRVGGDNIIGSPGGGVGGLNSRPLMGNDPRGDRQSSFEDVSFDGSGSFTMYSVDT 478          
BLAST of mRNA_S-firma_M_contig9165.20107.1 vs. uniprot
Match: A0A6H5K517_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K517_9PHAE)

HSP 1 Score: 280 bits (717), Expect = 2.030e-90
Identity = 162/232 (69.83%), Postives = 186/232 (80.17%), Query Frame = 0
Query:  164 MLRNGTLRGLLINFCEQSLCGESVDFLVDVAINYESLTDPEEQFGALAEIVEHYLAQGSANEVNVSNAYRNAAAAWLTKRDEFLALQLEKRAHVLDRQRDEIAKMLGENLLARFKKIPMAINAMRALK---------EVAAADSSL-GEEGGDHEDEGMRIMLQASAALEVARIQRITRVE------SPGAG-GGRNSVVALRR---KSGSSSFEDGSFDGSDSFTMYTLET 375
            MLRN TLRGLLINFCE+SLCGESVDFLVDV INYESL+DP+EQFGAL++IVE+YLA+GSANEVNVSNA+RNAAA WLTKR+EFLAL+ E RAHVLD QRDEIAKML ENLL +FK+ P+ I AMRALK         EVAA +++L GEEG + +DEGMRIMLQASAA EVARIQRI+RV       SPG G GG NS   +R    +   SSFED SFDGSDSFTMY+++T
Sbjct:    1 MLRNETLRGLLINFCEESLCGESVDFLVDVTINYESLSDPDEQFGALSDIVENYLAEGSANEVNVSNAHRNAAAVWLTKREEFLALEGETRAHVLDLQRDEIAKMLAENLLVKFKQAPLTIAAMRALKGLKAPDHDPEVAAGENTLFGEEGSNVQDEGMRIMLQASAAAEVARIQRISRVGGDKLIGSPGEGVGGLNSRPLIRNDLTRDRQSSFEDVSFDGSDSFTMYSVDT 232          
BLAST of mRNA_S-firma_M_contig9165.20107.1 vs. uniprot
Match: D8LQW8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW8_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 6.430e-11
Identity = 54/149 (36.24%), Postives = 82/149 (55.03%), Query Frame = 0
Query:  160 GVIQMLRNG-TLRGLLINFCEQSLCGESVDFLVDVAINYESLT------DPE-EQFGALAEIVEHYLAQGSANEVNVSNAYRNAAAAWLTKRDEFLALQLEKRAHVLDRQRDEIAKMLGENLLARFKKIPMAINAMRALKEVAAADSSL 300
            GV+++   G  L      FC+++LC ES DFLVDV + YE +       DPE EQF +   I+  YL   S +E+N+S++      A+ T R+ F  L LE+R  +L    DEI +ML +NLL +F++  +A++    L   A  D+ L
Sbjct:   33 GVLRLASGGGELAQQFGKFCQENLCMESWDFLVDV-VRYERIAPSLIANDPEDEQFNSFLFILNQYLLPTSPDEINISSSMSTRILAFGT-REAFNELSLEERVGILKEPFDEIVRMLEQNLLNKFQR-RVAVDREAQLLAAADGDADL 178          
BLAST of mRNA_S-firma_M_contig9165.20107.1 vs. uniprot
Match: D8LQX1_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX1_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 6.720e-11
Identity = 55/149 (36.91%), Postives = 82/149 (55.03%), Query Frame = 0
Query:  160 GVIQMLRNG-TLRGLLINFCEQSLCGESVDFLVDVAINYESLT------DPE-EQFGALAEIVEHYLAQGSANEVNVSNAYRNAAAAWLTKRDEFLALQLEKRAHVLDRQRDEIAKMLGENLLARFKKIPMAINAMRALKEVAAADSSL 300
            GV+++   G  L      FC+++LC ES DFLVDV + YE +       DPE EQF +   I+  YL   S +E+N+S++      A+ T RD F  L LE+R  +L    DEI +ML +NLL +F++    +   R  + +AAAD  +
Sbjct:   96 GVLRLASGGGELAQQFGKFCQENLCMESWDFLVDV-VRYERIAPSLVANDPEDEQFNSFLFILNQYLLPTSPDEINISSSMSTRILAFGT-RDAFNELSLEERIGILGEPFDEIVRMLEQNLLNKFQR---RVAVDREAQLLAAADGDV 239          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9165.20107.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LJ87_ECTSI9.560e-17673.71RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K517_9PHAE2.030e-9069.83RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LQW8_ECTSI6.430e-1136.24RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LQX1_ECTSI6.720e-1136.91RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.1850coord: 157..289
e-value: 2.6E-13
score: 51.7
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..378
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..28
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR016137RGS domainPFAMPF00615RGScoord: 163..279
e-value: 3.0E-9
score: 37.2
IPR016137RGS domainPROSITEPS50132RGScoord: 163..277
score: 8.891
IPR036305RGS domain superfamilySUPERFAMILY48097Regulator of G-protein signaling, RGScoord: 164..279

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9165contigS-firma_M_contig9165:598..4046 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9165.20107.1mRNA_S-firma_M_contig9165.20107.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9165 598..4046 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9165.20107.1 ID=prot_S-firma_M_contig9165.20107.1|Name=mRNA_S-firma_M_contig9165.20107.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=379bp
SRKRSGLCLFFSESWSFFLPITLLYLIAMASMANKLKDTNDAFKIRNEIG
YICVATAVTSATRTVHISLLSWWGGVNETFPPTVHDLIACSAALYVSFYR
PLKAFYGVGSRRSLRGIHSARRIYSGDDEDGYDNNNNNNNRQAADKGGGW
GDENKPETWGVIQMLRNGTLRGLLINFCEQSLCGESVDFLVDVAINYESL
TDPEEQFGALAEIVEHYLAQGSANEVNVSNAYRNAAAAWLTKRDEFLALQ
LEKRAHVLDRQRDEIAKMLGENLLARFKKIPMAINAMRALKEVAAADSSL
GEEGGDHEDEGMRIMLQASAALEVARIQRITRVESPGAGGGRNSVVALRR
KSGSSSFEDGSFDGSDSFTMYTLETGDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036305RGS_sf
IPR016137RGS