prot_S-firma_M_contig914.20083.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig914.20083.1
Unique Nameprot_S-firma_M_contig914.20083.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length559
Homology
BLAST of mRNA_S-firma_M_contig914.20083.1 vs. uniprot
Match: A0A6H5L074_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L074_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 8.870e-25
Identity = 169/541 (31.24%), Postives = 211/541 (39.00%), Query Frame = 0
Query:   39 ELDHYFSEPMVAHRARVIARAAREELGEIDPVGLASGERLTRTKQAFRYYQQAMRIILAEYLEHDGRSIPTDTLTNAAQGAHKKGKDGGQSGGTCTTAAYVLASESFESFVELMRRLDS----------GPPHNGPAQPNGAP-----DPFGEGAVAQAPPTDWD-----SSFATGDRPSSRLTGDPARKGIELFNNNTKRGTAQPPRISGSSLSRCRPHAGTGGDRGDDEPARFEPSTPPMXXXXLLGQAACTAADPSATTSIPSYPSSIDQVQPFAPSDCRGGRTENEGWPTNDSRRWLVKLDDEMPRGKTEGERE-NGVHEHSTDALSWR-APRPAARLKMGRPGGGRSYETSAVEGHRLAGVVPFQREGMAAFDGHWLD------------ARGWFVEEDSAGWVSVPATSTTAAAGDIGGARGDHMDMGSTFDTDNAVASPRCLLDGSIGDFALGSSLKESNHSSLFASRNYSPNFHFGSSSGWSANPYDCNLYSEYGDGDDDEKDDDQSCDGSEEFFPEPDPFDPTDGGLPCLSR 545
            ELD YF++P  A  A+ +A+ ARE LGE+DP   A GER  +  QAFR YQQ M  I++     D       +L  AA+  H  G    +S       AYVLASE+ ESF+ELMRRLD           G PH+      G P     DP G  A  +  P  W      SS     R SSR   +P      ++ +  + G +  P    S   R        G    DE +       P XXX  L   A  A+           P   D ++  +P    GG            RR +    ++ P    E   E  GV      A S R +P    +    RP   R          R  GV    R       G W              A+ WF E  +  WV V A               + MD+  TF TD AV SP  L D S GDFA    +  SN SS   S   +P         W  + YD      +     D++DD    DGSEE FPEPDP D  DGGLPCLSR
Sbjct:    5 ELDRYFADPTTARSAQNLAKGAREVLGEVDP--FAPGERPNQI-QAFRSYQQGMSTIISTCPGCDQNYGSRRSLIVAARRMHDSGPKSERS----MAVAYVLASENLESFLELMRRLDEPLRQFTGPEQGSPHDRAKIAGGTPPSVHEDPAGVVARPECRPAKWGVATKVSSAVAEGRGSSR--DNPQEPRANVWPSLERDGGSSYPTRPSSPRMRAFHERLQRGTIWSDECSTSRGGKSPXXXXASLSAQATDAS-----------PVIEDYLRRCSPQLAGGGGVT--------FRRAIAS--EQKPSSSEESPSEIEGV-----SACSGRISPVGREQRPDRRPATARFSSRDHSASSRGNGVATPGRYSP----GRWTPPGSSGDQDSDPWAQAWFAEHGNENWVRVLAEEERGTRFPP-----NRMDISGTFGTDMAVTSPAQLFDRSGGDFAF---ISPSNGSS---SSRRAPGSPSPRGPDWCLHDYDTATGGGFRSRLVDQEDDGAWSDGSEEVFPEPDPSDLADGGLPCLSR 495          
BLAST of mRNA_S-firma_M_contig914.20083.1 vs. uniprot
Match: D8LJL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJL5_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 5.660e-12
Identity = 64/157 (40.76%), Postives = 72/157 (45.86%), Query Frame = 0
Query:  400 ARGWFVEEDSAGWVSVPATSTTAAAGDIGGARGDHMDMGSTFDTDNAVASPRCLLDGSIGDFALGSSLKESNHSSLFASRNYSPNFHFGSSSGWSANPYDCNLYSEYGDGDDDEKDDDQSCDGSEEFFPEPDPFDPTDGGLPCLSRCLRDSCVLIVP 556
            ARGWF E  +  WVSV A               D MDM STF TD AVASP  L D S GD A  S   ES+ S   A  + +P         W  +  D      +     D+ DD    DGSEE FPEPDP D  DGGLPCLSR        + P
Sbjct:  173 ARGWFTEHGNENWVSVSAEEDRGPRFPP-----DRMDMSSTFGTDMAVASPAQLFDRSGGDLAFVSPKHESS-SGRRAPGSLAPR-----GPDWCLHEDDTAAGGGFRSRLVDQDDDGAWSDGSEEVFPEPDPSDLADGGLPCLSRRPLGDWTAVAP 318          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig914.20083.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L074_9PHAE8.870e-2531.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJL5_ECTSI5.660e-1240.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig914contigS-firma_M_contig914:4875..8235 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig914.20083.1mRNA_S-firma_M_contig914.20083.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig914 4681..8949 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig914.20083.1 ID=prot_S-firma_M_contig914.20083.1|Name=mRNA_S-firma_M_contig914.20083.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=559bp
MNSTTNLAAKRLRSPVASSASAPLDHLARTNQESKMFRELDHYFSEPMVA
HRARVIARAAREELGEIDPVGLASGERLTRTKQAFRYYQQAMRIILAEYL
EHDGRSIPTDTLTNAAQGAHKKGKDGGQSGGTCTTAAYVLASESFESFVE
LMRRLDSGPPHNGPAQPNGAPDPFGEGAVAQAPPTDWDSSFATGDRPSSR
LTGDPARKGIELFNNNTKRGTAQPPRISGSSLSRCRPHAGTGGDRGDDEP
ARFEPSTPPMPPMPLLGQAACTAADPSATTSIPSYPSSIDQVQPFAPSDC
RGGRTENEGWPTNDSRRWLVKLDDEMPRGKTEGERENGVHEHSTDALSWR
APRPAARLKMGRPGGGRSYETSAVEGHRLAGVVPFQREGMAAFDGHWLDA
RGWFVEEDSAGWVSVPATSTTAAAGDIGGARGDHMDMGSTFDTDNAVASP
RCLLDGSIGDFALGSSLKESNHSSLFASRNYSPNFHFGSSSGWSANPYDC
NLYSEYGDGDDDEKDDDQSCDGSEEFFPEPDPFDPTDGGLPCLSRCLRDS
CVLIVPGQ*
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