prot_S-firma_M_contig9127.20076.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9127.20076.1
Unique Nameprot_S-firma_M_contig9127.20076.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length117
Homology
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BLAST of mRNA_S-firma_M_contig9127.20076.1 vs. uniprot
Match: D7FZI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI4_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 6.560e-20
Identity = 47/112 (41.96%), Postives = 67/112 (59.82%), Query Frame = 0 
Query:    1 MGLLTAMVDSPVHSAMTNTKGSNASTKHPCAACNISQEGLKDWQCDFQRNLRTAEGIDADIAYAEAGSTAYERGQRAMHRGVTPPALPNPLKRLTFDRVRQIGVDVLHQDGI 112
            MGLLTA +DSP+HS  TN K  NA T+  C AC + ++ L + + D  +N R+A+G+  D+A   +     E+ + +   GV  P  PNPL  +TFDRV   G+DVLHQ  +
Sbjct:  123 MGLLTANLDSPMHSLWTNQKHHNAKTERACQACTVPRKDLGNPRYDIVKNARSADGLREDLALVASIEKRQEQLKMSRALGVVVPRYPNPLDEVTFDRVEGCGMDVLHQSAL 234
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BLAST of mRNA_S-firma_M_contig9127.20076.1 vs. uniprot
Match: D7FWW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW9_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 1.130e-18
Identity = 45/114 (39.47%), Postives = 65/114 (57.02%), Query Frame = 0 
Query:    1 MGLLTAMVDSPVHSAMTNTKGSNASTKHPCAACNISQEGLKDWQCDFQRNLRTAEGIDADIAYAEAGSTAYERGQRAMHRGVTPPALPNPLKRLTFDRVRQIGVDVLHQDGIVS 114
            +GLLTA +DSP+HS  TN K  NA T+  C AC + +  L + + D  +N RTA+G+  D++   A     +R + +   GV  P  PNP   + FDRV   G+D+LHQ  + S
Sbjct:   29 LGLLTANLDSPLHSLWTNQKHHNAKTERACQACVVPRRDLGNPKYDIVKNARTADGLREDLSRVAATEKKQDRDKLSRALGVVVPRYPNPQDEVAFDRVEGCGMDILHQSALNS 142
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BLAST of mRNA_S-firma_M_contig9127.20076.1 vs. uniprot
Match: A0A6H5KPX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPX4_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 2.020e-12
Identity = 40/105 (38.10%), Postives = 56/105 (53.33%), Query Frame = 0 
Query:    1 MGLLTAMVDSPVHSAMTNTKGSNASTKHPCAACNISQEGLKDWQCDFQRNLRTAEGIDADIAYAEAGSTAYERGQRAMHRGVTPPALPNPLKRLTFDRVRQIGVD 105
            +GLLTA +DSP+HS   N K  NA T   C AC + +  L + + D  +N RTA+G+  D+    A     +R + +   GV  P  PNPL  +  DRV   G+D
Sbjct:   26 LGLLTANLDSPMHSLWANQKHHNAKTT--CQACVVPRRDLGNPKYDIVKNARTADGLKEDLDRVAATEKKQDRVKLSRALGVVVPRYPNPLHEVAIDRVDGCGMD 128
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9127.20076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FZI4_ECTSI6.560e-2041.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWW9_ECTSI1.130e-1839.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KPX4_9PHAE2.020e-1238.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9127contigS-firma_M_contig9127:3441..3791 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9127.20076.1mRNA_S-firma_M_contig9127.20076.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9127 3441..3803 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9127.20076.1 ID=prot_S-firma_M_contig9127.20076.1|Name=mRNA_S-firma_M_contig9127.20076.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=117bp
MGLLTAMVDSPVHSAMTNTKGSNASTKHPCAACNISQEGLKDWQCDFQRN
LRTAEGIDADIAYAEAGSTAYERGQRAMHRGVTPPALPNPLKRLTFDRVR
QIGVDVLHQDGIVSDG*
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