prot_S-firma_M_contig9114.20059.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9114.20059.1
Unique Nameprot_S-firma_M_contig9114.20059.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length153
Homology
BLAST of mRNA_S-firma_M_contig9114.20059.1 vs. uniprot
Match: D8LKS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS4_ECTSI)

HSP 1 Score: 246 bits (629), Expect = 1.970e-80
Identity = 128/154 (83.12%), Postives = 142/154 (92.21%), Query Frame = 0
Query:    1 MNSGGGGNQTGNAGWSGAGHAARDFSAEGAGEKYFGLHLKVPADQLSATLQRLVQEDGSL-EPLPPLCDIDVSPGYPGVTKAKGKFGLDEGRVVLRVHNSNRPNVCVSEGAIPVTTRTPPFKVPAWAIGPLRAGMVVIRNQSNAPALQK-NKKN 152
            ++SGGG NQTG+AGW GAG AARDFSAEGAGEKYFGL LK+PAD+L+ATLQRLV+EDGSL EPLPPLC IDVSPGYPGV KAKG FGLDEGRVVLRVHNSN+PNVCVSEGAIPVTTRTPPFKVPA+AIGP RAG +++RNQ+NA AL+K NKKN
Sbjct:   95 IDSGGGDNQTGSAGWCGAGRAARDFSAEGAGEKYFGLRLKIPADKLAATLQRLVEEDGSLLEPLPPLCGIDVSPGYPGVIKAKGTFGLDEGRVVLRVHNSNKPNVCVSEGAIPVTTRTPPFKVPAFAIGPPRAGKLMLRNQNNANALKKKNKKN 248          
BLAST of mRNA_S-firma_M_contig9114.20059.1 vs. uniprot
Match: A0A6H5JI61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI61_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 3.420e-40
Identity = 72/82 (87.80%), Postives = 78/82 (95.12%), Query Frame = 0
Query:   72 SPGYPGVTKAKGKFGLDEGRVVLRVHNSNRPNVCVSEGAIPVTTRTPPFKVPAWAIGPLRAGMVVIRNQSNAPALQK-NKKN 152
            +PGYPGVT+AKGKFGLDEGRVVLRVHNSN+PNVCVSEGAIPVTTRTPPF VPA+AIGPLRAG V+IRNQSNA AL+K NKKN
Sbjct:  218 TPGYPGVTRAKGKFGLDEGRVVLRVHNSNKPNVCVSEGAIPVTTRTPPFTVPAFAIGPLRAGKVIIRNQSNANALKKKNKKN 299          
BLAST of mRNA_S-firma_M_contig9114.20059.1 vs. uniprot
Match: D7G8P5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8P5_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 3.250e-33
Identity = 68/128 (53.12%), Postives = 87/128 (67.97%), Query Frame = 0
Query:   16 SGAGHAARDFSAEGAGEKYFGLHLKVPADQLSATLQRLVQEDGSLEPLPPLCDIDVSPGYPGVTKAKGKFGLD-EGRVVLRVHNSNRPNVCVSEGAIPVTTRTPPFKVPAWAIGPLRAGMVVIRNQSN 142
            SG G  ARDFSAEGA +K++GLHL +P   L+A L+ LVQ DGSL+  P LCD +V+P +PG+TK +  FGLD EG +++ VHN    N CV  G IPVTT  PP++VP +AI PL AG +V     N
Sbjct:  398 SGNGATARDFSAEGANDKWYGLHLDIPTRDLAAKLRLLVQPDGSLKDAP-LCDTEVNPDHPGLTKGRSTFGLDREGALIMGVHNGQSLNRCVGGGTIPVTTAAPPYRVPHFAIAPLLAGKIVSNKTHN 524          
BLAST of mRNA_S-firma_M_contig9114.20059.1 vs. uniprot
Match: D8LFC5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFC5_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 2.370e-8
Identity = 33/51 (64.71%), Postives = 38/51 (74.51%), Query Frame = 0
Query:   16 SGAGHAARDFSAEGAGEKYFGLHLKVPADQLSATLQRLVQEDGSLEPLPPL 66
            SG GHAARDFS EG+GE+Y+GLHL +P   L A L  LVQ DGSL+  PPL
Sbjct:  393 SGDGHAARDFSEEGSGERYYGLHLALPTKDLRAQLPLLVQPDGSLKE-PPL 442          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9114.20059.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LKS4_ECTSI1.970e-8083.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JI61_9PHAE3.420e-4087.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8P5_ECTSI3.250e-3353.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LFC5_ECTSI2.370e-864.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9114contigS-firma_M_contig9114:946..1404 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9114.20059.1mRNA_S-firma_M_contig9114.20059.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9114 2..1621 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9114.20059.1 ID=prot_S-firma_M_contig9114.20059.1|Name=mRNA_S-firma_M_contig9114.20059.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=153bp
MNSGGGGNQTGNAGWSGAGHAARDFSAEGAGEKYFGLHLKVPADQLSATL
QRLVQEDGSLEPLPPLCDIDVSPGYPGVTKAKGKFGLDEGRVVLRVHNSN
RPNVCVSEGAIPVTTRTPPFKVPAWAIGPLRAGMVVIRNQSNAPALQKNK
KN*
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