prot_S-firma_M_contig9067.20007.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9067.20007.1
Unique Nameprot_S-firma_M_contig9067.20007.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length263
Homology
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BLAST of mRNA_S-firma_M_contig9067.20007.1 vs. uniprot
Match: D8LP20_ECTSI (Vacuolar protein sorting-associated protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP20_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 1.560e-21
Identity = 72/152 (47.37%), Postives = 85/152 (55.92%), Query Frame = 0 
Query:   29 GDDEGLLLRPLMLSYTAPEHQQHRRVRVCLEGSPWSAPFGLDEGGTDHVLEVSGGPK-SAAT----------------------------AAVLSPKRKQGXXXXXXXXXXXXXXXXXXXXXXXXXXXAERQAFAVGVSVEAAPPPFERSSL 151
            G DEG LLRPLMLSYT PE QQHRRVRV LEGSPWS+PF LD+GG++ VLEVSG P+ S+AT                            A  L   ++QG       XXXXX               A RQAFAVGVS++AAP PF+R+ +
Sbjct: 4013 GVDEGPLLRPLMLSYTIPEEQQHRRVRVRLEGSPWSSPFALDQGGSNDVLEVSGRPRESSATXXXXXXXXXXXXXXXXXXXXXXXXXXXHAPKLDQAQEQGLSWGAARXXXXXED-------------AARQAFAVGVSIKAAPAPFDRTKV 4151
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BLAST of mRNA_S-firma_M_contig9067.20007.1 vs. uniprot
Match: A0A6H5JKL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKL9_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 5.190e-10
Identity = 70/112 (62.50%), Postives = 80/112 (71.43%), Query Frame = 0 
Query:   53 RVRVCLEGSPWSAPFGLDEGGTDHVLEVSGGPKSAATAAVLSPKRKQGXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------AERQAFAVGVSVEAAPPPFERSSL 151
            RVRV LEGSPWS+PF LD+GG++HVLEVSG P+ +AT           XXXXXXXXXXXXXXXXXXXXXXXXXXX             A RQAFAVGVS++AAP PF R+ +
Sbjct: 3461 RVRVRLEGSPWSSPFALDQGGSNHVLEVSGRPRESATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAARQAFAVGVSIKAAPAPFHRTKV 3572
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9067.20007.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LP20_ECTSI1.560e-2147.37Vacuolar protein sorting-associated protein, putat... [more]
A0A6H5JKL9_9PHAE5.190e-1062.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9067contigS-firma_M_contig9067:1062..3604 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9067.20007.1mRNA_S-firma_M_contig9067.20007.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9067 1061..3604 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9067.20007.1 ID=prot_S-firma_M_contig9067.20007.1|Name=mRNA_S-firma_M_contig9067.20007.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=263bp
QQQRSSGQREEAQVGEGLEPPRSARAHGGDDEGLLLRPLMLSYTAPEHQQ
HRRVRVCLEGSPWSAPFGLDEGGTDHVLEVSGGPKSAATAAVLSPKRKQG
QSQQEQEQEREEGWGWGAARRRRRRETAERQAFAVGVSVEAAPPPFERSS
LARSLARTQSGGFAGPAVRDRQRYGPRDRGPAGRAGSRRGASEGLQRCPG
RVPLAAGRHPRLVRRPRRGGLQEPPPGAAFLRRRRRRRRRGRGRGEGRRD
GVGLVWRDSAGGG
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