prot_S-firma_M_contig905.19987.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig905.19987.1
Unique Nameprot_S-firma_M_contig905.19987.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length495
Homology
BLAST of mRNA_S-firma_M_contig905.19987.1 vs. uniprot
Match: D8LJ93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ93_ECTSI)

HSP 1 Score: 449 bits (1155), Expect = 2.130e-151
Identity = 294/510 (57.65%), Postives = 329/510 (64.51%), Query Frame = 0
Query:    3 GAVSVQDPSSLRREYEALAAKNVGDQELLNHMKKLLRPPP--AANEPAEKAXXXXXXXXXXSSVRRGSATRSSVEGAP-AGSSGRRGSA------VPGEGTXXXXXXXXXXARPNSHNGRLSYSSSTLASQQAQQSRRGSNARRQSVDGDRPLSAPQTKPAVPRQRPRSSVGDKNDASGKPTKSRRRSYLGQPTTGGSGDAVGTAAEVAVSAAAADDAAPAEGDPAQDADP--------DKMQIDSWESVSQQPSCPLCHMVFSTEGKRDQHIKYSPVHASPAEGSEPQPAPEPAMDSITIYSGTKLFWRTRLDVELFMQQHKTVNAVQVLVFDVSTNREIAQVWISWNNVVAKLDPKDMKKEMEAAERAFYNLGMKPTPENVEAEATRKATVSFIIKRIQVDEIVEEGVEPGPSKSYKVSLLQMAADDDA-NLLVDQPEGVNPTFSRALMKRASMQEVNEVMTSLRRSLGDVSKDAQAAVASLGSVEGVVEQGRRGSVEVARRVSIQGS 494
            G+V V DP++LR+EYEA+AA++VGD+ELLNHMKKL+  P   AA++P  K           SSVRR S     V+ A  AG   RRGS       V G G         X +RP SHN R                       R SVDGDRPLSAPQTKP VP+QRPRSS+G+KND SGKPTKSRRRSYLGQPT G  G AVG AA                  PAQD           + M+IDSWESVSQQPSCPLCHMVFSTEGKRDQHIKYSPVHA PAEGS P P  EP MDSITIYSG+KLFWRTRL+VE+FMQQHKT N                       NVV          +M+AAERAF+NLGMKPTPENV+AEATRKA VSFIIKRIQVD         GP+ S+KVS+LQMAAD+D   LLV++PEGVN TFSRA+ KRAS+QEV EVMTSLR+SLGDV+  AQAA ASL    G VEQGRRGSV VARR SIQGS
Sbjct:    5 GSVGVVDPTALRKEYEAMAAQDVGDEELLNHMKKLIISPKTEAADKPKTKETAPNVEGTRRSSVRRNSGPAPGVDSAAVAGPKARRGSGGIAASGVEG-GAAGSTARRGXASRPLSHNSRXXXXXXXXXXXXXXXXXXXXX--RSSVDGDRPLSAPQTKPPVPKQRPRSSLGEKNDGSGKPTKSRRRSYLGQPTAGQGGVAVGAAAAXXXXXXXXXXXXA----PAQDEXXXXXXXXXVEDMKIDSWESVSQQPSCPLCHMVFSTEGKRDQHIKYSPVHAPPAEGSNPPP--EPTMDSITIYSGSKLFWRTRLNVEMFMQQHKTAN-----------------------NVV----------QMDAAERAFHNLGMKPTPENVQAEATRKAAVSFIIKRIQVDRDESPEEAGGPAVSHKVSMLQMAADEDGMQLLVEKPEGVNDTFSRAMTKRASIQEVAEVMTSLRKSLGDVNTAAQAAAASLVGATGTVEQGRRGSVXVARRASIQGS 472          
BLAST of mRNA_S-firma_M_contig905.19987.1 vs. uniprot
Match: A0A6H5K5G4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5G4_9PHAE)

HSP 1 Score: 440 bits (1132), Expect = 6.150e-149
Identity = 271/484 (55.99%), Postives = 305/484 (63.02%), Query Frame = 0
Query:    3 GAVSVQDPSSLRREYEALAAKNVGDQELLNHMKKLLRPPPAANEPAEKAXXXXXXXXXXSSVRRGSATRSSVEGAPAGSSGRRGSAVPGEGTXXXXXXXXXXARPNSHNGRLSYSSSTLASQQAQQSRRGSNARRQSVDGDRPLSAPQTKPAVPRQRPRSSVGDKNDASGKPTKSRRRSYLGQPTTGGSGDAVGTAAEVAVSAAAADDAAPAEGDPAQDA--------DPDKMQIDSWESVSQQPSCPLCHMVFSTEGKRDQHIKYSPVHASPAEGSEPQPAPEPAMDSITIYSGTKLFWRTRLDVELFMQQHKTVNAVQVLVFDVSTNREIAQVWISWNNVVAKLDPKDMKKEMEAAERAFYNLGMKPTPENVEAEATRKATVSFIIKRIQVDEIVEEGVEPGPSKSYKVSLLQMAADDDA-NLLVDQPEGVNPTFSRALMKRASMQEVNEVMTSLRRSLGDVSKDAQAAVASLGSVEGVVEQ 477
            G+V V DP+ LR+EYEA+AAK VGD+ELLNHMKKL+  P +                                                                                      RR SNARR SVD DRPLSAPQTKP VP+QRPRSS+G++ND SGKPTKSRRRSYLGQP     GDAVG AA VAV A+AA D A     PAQD         D   ++ DSWESVSQQPSCPLCHMVFSTEGKRDQHIKYSP HA PAEGS P P  EP MDSITIYSG+KLFWRTRL+VE+FMQQHKT N V               VW+SW+ VVAKLD K+MK EM+AAERAF+NLGMKPTPENV+AEATRKA VSFIIKRIQVD         GP+ S+KVS+LQMAAD+D   LL+++PEGVN TFSRA+ KRAS+QEV EVM SLR+SLGDV+  AQAA ASL    G VEQ
Sbjct:    5 GSVGVVDPAVLRKEYEAMAAKEVGDEELLNHMKKLIISPQSGQ------------------------------------------------------------------------------------RRASNARRSSVDSDRPLSAPQTKPPVPKQRPRSSLGEENDGSGKPTKSRRRSYLGQP----GGDAVGAAAAVAVDASAAVDGAA----PAQDEXXXXXXXXDVQDIKTDSWESVSQQPSCPLCHMVFSTEGKRDQHIKYSPAHAPPAEGSNPPP--EPTMDSITIYSGSKLFWRTRLNVEMFMQQHKTANNV---------------VWVSWSAVVAKLDAKEMKNEMDAAERAFHNLGMKPTPENVQAEATRKAAVSFIIKRIQVDREDSPEEAGGPAVSHKVSMLQMAADEDGMQLLMEKPEGVNDTFSRAMSKRASIQEVAEVMASLRKSLGDVNTAAQAAAASLDGATGTVEQ 379          
BLAST of mRNA_S-firma_M_contig905.19987.1 vs. uniprot
Match: A0A7S3H489_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H489_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 5.560e-12
Identity = 50/185 (27.03%), Postives = 99/185 (53.51%), Query Frame = 0
Query:  229 IDSWESVSQQPSCPLCHMVFSTEGKRDQHIKYSPVHASPAEGSE--------PQPAPEPAMDSIT-----------IYSGTKLFWRTRLDVELFMQQHKTVNAVQVLVFDVSTNREIAQVWISWNNV---VAKLDPKDMK--KEMEAAERAFYNLGMKPTPENVEAE-ATRKATVSFIIKRIQVD 388
            +DSW+SV+ QP C  C M F ++   D+H+K+S +HA   E ++        P  + +  +  +            +Y+G+K FWRT++++E+ M  H     ++V+ FD   + E  ++++++  +   + KL   D++  K  E AE+ F++ G +   E+V  E    +  V++I++R+Q+D
Sbjct:  142 VDSWDSVTHQPFCTTCQMAFKSQDFLDRHVKFSDLHAKNLEKAKGVIAVDKNPITSTDAGVGMVQQSQVEGVHYKLLYTGSKFFWRTQMNIEIDMYLHLLPYVIEVISFDPIKDHEATRIYLNYYTIQSTLEKLVSSDLEAAKLKELAEQRFHSHGEEA--ESVLREHLLLQRVVTYILQRLQLD 324          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig905.19987.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LJ93_ECTSI2.130e-15157.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5G4_9PHAE6.150e-14955.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3H489_9STRA5.560e-1227.03Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig905contigS-firma_M_contig905:16471..21499 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig905.19987.1mRNA_S-firma_M_contig905.19987.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig905 16419..22095 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig905.19987.1 ID=prot_S-firma_M_contig905.19987.1|Name=mRNA_S-firma_M_contig905.19987.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=495bp
MGGAVSVQDPSSLRREYEALAAKNVGDQELLNHMKKLLRPPPAANEPAEK
AAASKADGGRRSSVRRGSATRSSVEGAPAGSSGRRGSAVPGEGTAGSTVR
RGSAARPNSHNGRLSYSSSTLASQQAQQSRRGSNARRQSVDGDRPLSAPQ
TKPAVPRQRPRSSVGDKNDASGKPTKSRRRSYLGQPTTGGSGDAVGTAAE
VAVSAAAADDAAPAEGDPAQDADPDKMQIDSWESVSQQPSCPLCHMVFST
EGKRDQHIKYSPVHASPAEGSEPQPAPEPAMDSITIYSGTKLFWRTRLDV
ELFMQQHKTVNAVQVLVFDVSTNREIAQVWISWNNVVAKLDPKDMKKEME
AAERAFYNLGMKPTPENVEAEATRKATVSFIIKRIQVDEIVEEGVEPGPS
KSYKVSLLQMAADDDANLLVDQPEGVNPTFSRALMKRASMQEVNEVMTSL
RRSLGDVSKDAQAAVASLGSVEGVVEQGRRGSVEVARRVSIQGS*
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