prot_S-firma_M_contig9.19912.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9.19912.1
Unique Nameprot_S-firma_M_contig9.19912.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length236
Homology
BLAST of mRNA_S-firma_M_contig9.19912.1 vs. uniprot
Match: B5LWG6_9PHYC (Putative oligoribonuclease n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWG6_9PHYC)

HSP 1 Score: 298 bits (764), Expect = 1.650e-99
Identity = 137/227 (60.35%), Postives = 175/227 (77.09%), Query Frame = 0
Query:    1 KQISRDYDRYNPWLWIDIETTGLDPATSEILEVNVIVTDASLVPWDSLHIVIHHPMNILMLKSSAWCKRKFSSKSYGGNGLFDSCHYANTTYEDAAFMLWNFFEFYTSNKVGTGRPQKHDRQFFDKTVGANGQNLSSYDVSNTAFSTKSPHRL-ALLCGSTVHFDRGFIEYHFPALKRFLNHKNVDVTTLLETAKRFRPDILQAKPKPSSTHRAMDDILDSINLYRF 226
            K  +R YDR NPW WIDIET+ LD +TS++LE+ ++VTD+ L  WDSLH+VIHHP+NILMLKSS WCK KF S+SYGGNGLFD CHY+NT+  DA  ++ NFFE+Y+++++G GRP    R FFD+T GANG  LS YD+S    +     R   LL GSTV+FDR  IE HFP L+++L+HKNVDVT+LLETAKRF PD+++ KPKP+  HRAMDDILDS+ LY++
Sbjct:   11 KVFNRGYDRNNPWFWIDIETSSLDFSTSDVLEIAIVVTDSGLNVWDSLHVVIHHPINILMLKSSNWCKEKFCSRSYGGNGLFDDCHYSNTSITDATHLMLNFFEYYSTHEIGRGRPAHKSRTFFDRTSGANGMKLSPYDISCQVQNFTGTRRSQGLLAGSTVYFDRRIIEKHFPVLRKYLSHKNVDVTSLLETAKRFHPDLIENKPKPTMVHRAMDDILDSLTLYKY 237          
BLAST of mRNA_S-firma_M_contig9.19912.1 vs. uniprot
Match: Q6XM84_9PHYC (FirrV-1-A3 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM84_9PHYC)

HSP 1 Score: 271 bits (693), Expect = 6.750e-89
Identity = 132/232 (56.90%), Postives = 169/232 (72.84%), Query Frame = 0
Query:    4 SRDYDRYNPWLWIDIETTGLDPATSEILEVNVIVTDASLVPWDSLHIVIHHPMNILMLKSSAWCKRKFSSKSYGGNGLFDSCHYANTTYEDAAFMLWNFFEFYTSNKVGTG--RPQKHDRQFFDKTVGANGQNLSSY-----DVSNTAFSTK--SPHRLALLCGSTVHFDRGFIEYHFPALKRFLNHKNVDVTTLLETAKRFRPDILQAKPKPSSTHRAMDDILDSINLYRF 226
            ++ Y+RYNPW WID+ET+ LD + SE+LEV ++VTD  L  WDSLH+VIHHP+NILMLKSS WCK++F S  YGGNGLFD CHY+ T+  DA   +  FFE+Y ++ +GTG  RP   +R FFD+T G NG  LS       D+     +T   S  + ALL GSTV+FDR  IE HFP L+++L+HKN+DVTT+LETAKRFRPD++Q KPKP   HRAMDDI+DS+ LYR+
Sbjct:    3 NKTYERYNPWFWIDMETSSLDFSQSEVLEVALVVTDHHLNVWDSLHLVIHHPINILMLKSSNWCKQRFCSLKYGGNGLFDECHYSETSIADATHKMLQFFEYYCTHDIGTGSRRPPPSERSFFDRTRGTNGVLLSPLRCTHRDIPKQCTTTPGGSKKKQALLTGSTVYFDRRIIETHFPLLQKYLSHKNIDVTTMLETAKRFRPDLMQYKPKPLMKHRAMDDIMDSLALYRY 234          
BLAST of mRNA_S-firma_M_contig9.19912.1 vs. uniprot
Match: D8LPG5_ECTSI (EsV-1-139 n=2 Tax=root TaxID=1 RepID=D8LPG5_ECTSI)

HSP 1 Score: 216 bits (549), Expect = 1.220e-66
Identity = 106/234 (45.30%), Postives = 155/234 (66.24%), Query Frame = 0
Query:    1 KQISRDYDRYNPWLWIDIETTGLDPATSEILEVNVIVTDASLVPWDSLHIVIHHPMNILMLKSSAWCKRKFSSKSYGGNGLFDSCHYANTTYEDAAFMLWNFFEFYTSNKVGTGRPQK--HDRQFFDKTVGANGQNLSSYDVSNTAFST---KSPHRLALLCGSTVHFDRGFIEYHFPALKRFLNHKNVDVTTLLETAKRFRPDILQAKPKPSSTHRAMDDILDSINLYRFFKE 229
            K    DY+   PW WID+ETTGLD  T+ ILE+ ++VTD  L   DS+ +V+HHP +IL+ +SSAWC+RKF  +  GGNGLF++CH++  ++ +A + +WNFF+ Y+ +  G     +    + FFD+T+GANG  L + D S         +S ++  LL GSTV+FDR F+  +FP LK F +++ VDV+T LE  +R+RPD+    P+ + +HRA DDILDSI+L +FFKE
Sbjct:   31 KTSKHDYENEFPWFWIDMETTGLDTDTNLILEIVMVVTDRDLNEIDSMRLVLHHPHSILLARSSAWCRRKFCHRREGGNGLFEACHFSALSHHEAEYRMWNFFDHYSKDVGGRYDTTQITSSQPFFDRTLGANGTFLGASDASRCRHQQQPRRSNYKKCLLAGSTVYFDRIFLLKYFPCLKTFFHYRVVDVSTPLEMVRRWRPDVAAKLPRRNGSHRAYDDILDSISLMKFFKE 264          
BLAST of mRNA_S-firma_M_contig9.19912.1 vs. uniprot
Match: A0A835Z4U2_9STRA (Ribonuclease H-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4U2_9STRA)

HSP 1 Score: 124 bits (310), Expect = 3.920e-31
Identity = 74/226 (32.74%), Postives = 121/226 (53.54%), Query Frame = 0
Query:   13 WLWIDIETTGLDPATSE--ILEVNVIVTDASLVPWDSLHIVIHHPMNILMLKSSAWCKRKFSSKSYGGNGLFDSCHYANTTYEDAAFMLWNFFEFYTSNKVGTGRPQKHDRQFFD----KTVGANGQNLSSY-----DVSNTAFSTKSPHRLALLCGSTVHFDRGFIEYHFPALKRFLNHKNVDVTTLLETAKRFRPDILQAKPKPSSTHRAMDDILDSINLYRFF 227
            WL++DIE T LD       ILE+   + D S+   D+ H++++ P +I+   +S WCK++F S+  GGN LF  C  +  T   A FML  F   +   +       +  R+FF     +T+ A  +  +S      DV  T       H   +L G +V+FDR  + + +P L+  + HK +++++LLE A+++RPDIL   P     HRA+ D+L+S++L R+F
Sbjct:    9 WLFLDIECTQLDYQAHNFGILEIAAAIVDNSMEVIDTFHVIVNQPAHIIAA-ASKWCKKRFCSRLEGGNDLFAQCDASIITEAQAGFMLEQFIMKHAKERHMQPDEAEQKRRFFQAAELETIDAAIETETSEAFIEKDVEKTQGGIS--HFRVMLAGCSVYFDRAVLLHIYPRLRNLIGHKTIELSSLLEIARKWRPDILATLPPAQDAHRALIDVLESVSLLRWF 231          
BLAST of mRNA_S-firma_M_contig9.19912.1 vs. uniprot
Match: A0A836CDV0_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDV0_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.220e-29
Identity = 78/258 (30.23%), Postives = 124/258 (48.06%), Query Frame = 0
Query:    1 KQISRDYDRYNPWLWIDIETTGLDPATSE--ILEVNVIVTDASLVPWDSLHIVIHHPMNILMLKSSAWCKRKFSSKSYGGNGLFDSCHYANTTYEDAAFMLWNFFEFYTSNKVGTGR-----PQKHDRQFFDKTV---------GANGQNLSSYDV----SNTAFSTKSPHRL------ALLCGSTVHFDRGFIEYHFPALKRFLNHKNVDVTTLLETAKRFRPDILQAKPKPSSTHRAMDDILDSINLYRFFKEEVF 232
            +   R YD    W+W DIE TGLDP +    +LE+   VT   L   D+ H++IH P  +L   +S+WC   F  +  GGN LF  C  +  +  +A  +L  F   +   +          P+   ++   KT           A   ++ + D     +  A+    P          +  G + +FDRG I   FP L++++ HK +DVT++LE  +R+RPD+L++ P P  THRA+ D+L+SI L R+    +F
Sbjct:   12 EDFPRRYDA--TWIWCDIECTGLDPTSPGFGVLEIAAAVTGDDLTVQDTFHVIIHQPDRVLA-GASSWCAEHFGPRYAGGNDLFQQCRASVISEAEAGELLEAFIVKHAKPRKARAAAAAEVPEAVVKRNVFKTAEFGDVIEDGDAMAGDIEAQDTRRHRAGPAYGRPRPRAQQHDVYRVMFAGCSCYFDRGVILNRFPNLRKYIAHKTIDVTSVLEITRRWRPDLLRSLPAPQGTHRALPDVLESICLLRWVMTNLF 266          
BLAST of mRNA_S-firma_M_contig9.19912.1 vs. uniprot
Match: A0A835ZEI1_9STRA (Ribonuclease H-like domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEI1_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.780e-29
Identity = 73/245 (29.80%), Postives = 125/245 (51.02%), Query Frame = 0
Query:    2 QISRDYDRYNP-WLWIDIETTGLDPATSE--ILEVNVIVTDASLVPWDSLHIVIHHPMNILMLKSSAWCKRKFSSKSYGGNGLFDSCHYANTTYEDAAFMLWNFFEFYTSNKVGTGRPQKHDRQ----------------FFDKTVGANGQNLSSYDVSNTAFSTKSPHRLALLCGSTVHFDRGFIEYHFPALKRFLNHKNVDVTTLLETAKRFRPDILQAKPKPSSTHRAMDDILDSINLYRFF 227
            Q+    +RYN  W+ +DIE T LD  + +  ILE+   V D ++   D+ H+++H    I+   SS WCK++F S+  GGN LF  C  +  T E A  ML  F   + + K       +HD Q                   + V    + ++         ST   H   +L G +V+FDR  + + +P L+ ++ HK +++++LLE  +R+RPD+L++ P     HRA+ D++++++L R+F
Sbjct:    6 QLFSSQNRYNALWMMLDIECTSLDYTSPDFGILEIAASVVDDAMEVIDTFHVIVHQNARIIG-NSSRWCKQRFRSRLEGGNDLFAQCELSTITEEMAGAMLEAFILKH-AKKRQPAAGSEHDAQKRNLFRAAEFEPIDALVAHEVVDGPAEEVAPPKQQMKVESTGMEHYRIMLAGCSVYFDRAVLLHCYPRLRMYIGHKTIELSSLLEIVRRWRPDLLRSLPPTQECHRALVDVMEAVSLLRWF 248          
BLAST of mRNA_S-firma_M_contig9.19912.1 vs. uniprot
Match: A0A835YX31_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX31_9STRA)

HSP 1 Score: 114 bits (284), Expect = 6.830e-27
Identity = 78/254 (30.71%), Postives = 116/254 (45.67%), Query Frame = 0
Query:    5 RDYDRYNPWLWIDIETTGLDPATSE--ILEVNVIVTDASLVPWDSLHIVIHHPMNILMLKSSAWCKRKFSSKSYGGNGLFDSCHYANTTYEDAAFMLWNFFEFYTSNK-----VGTGRPQKHDRQFFDKTV-------------GANGQNLSSYDVSNTAFSTKSP----HRL--ALLCGSTVHFDRGFIEYHFPALKRFLNHKNVDVTTLLETAKRFRPDILQAKPKPSSTHRAMDDILDSINLYRFFKEEVF 232
            R YD    WLW DIE TGLDPA     ILE+   +T   L   D+ H+V+H P  +L   +S WC   F  +  GGN LF+    +  +   A  ML  F   +   +          P+   ++   KT              G   +             T  P    H +   +  G + +FDRG I   FP L++++ HK +DVT++LE  +R+RPD+L+  P P   HRA+ D+L+S+ L R+    +F
Sbjct:   27 RRYDAI--WLWCDIECTGLDPAAPGFGILEIAAAITGDDLTVQDTFHVVVHQPPRVLA-GASRWCAEHFGPRYAGGNDLFEQSKASVISESAAGEMLEAFIVKHAKPRRARAAAAAEGPEAACKRSMFKTAEFGDVMEEVVMPEGPATEGAQRQQPXXXXXRTNRPKAQQHDVFRVMFAGCSCYFDRGAILARFPNLRKYVAHKTIDVTSVLEITRRWRPDLLRCLPAPQGVHRALPDVLESVCLLRWVMTNLF 277          
BLAST of mRNA_S-firma_M_contig9.19912.1 vs. uniprot
Match: A0A0V0R1R0_PSEPJ (Ribonuclease H-like domain n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0R1R0_PSEPJ)

HSP 1 Score: 103 bits (256), Expect = 1.030e-23
Identity = 66/223 (29.60%), Postives = 111/223 (49.78%), Query Frame = 0
Query:   11 NPWLWIDIETTGLDPATSEILEVNVIVTDASLVPW-DSLHIVIHHPMNILMLKSSAWCKRKFSSKSYGGNGLFDSCHYANTTYEDAAFMLWNFFEFYTSNKVGTGRPQKHDRQFFDKTVGANGQNLSSYDVSNTAFSTKSPHRLALLCGSTVHFDRGFIEYHFPALKRFLNHKNVDVTTLLETAKRFRPDILQAKPKPSSTHRAMDDILDSINLYRFFKEEVF 232
            NP +W+D+E TGLD  T++I+E+ V+VTD +L    +   I++     +L  K  AWC     +K++G +GL   C  +  + E A   + +F +    NK             F+  +G                            G++VH DR FI  + P L  FL+++ +DV+T+ E A+R+ P+ ++ KP     HRA+DDI++SI   +F+K+ +F
Sbjct:    9 NPIVWVDLEMTGLDHNTNQIMEIAVLVTDGNLEQTIEGPEIIVKAEKQVLE-KMDAWC-----TKTHGESGLTQKCLESKISIEQAEKQVLDFLKNLNINK-------------FEAQLG----------------------------GNSVHMDRRFINKYMPQLDDFLHYRIIDVSTIKELARRWYPEEMEKKPVKKLCHRALDDIIESIEELKFYKKNIF 184          
BLAST of mRNA_S-firma_M_contig9.19912.1 vs. uniprot
Match: Q056X5_BUCCC (Oligoribonuclease n=1 Tax=Buchnera aphidicola subsp. Cinara cedri (strain Cc) TaxID=372461 RepID=Q056X5_BUCCC)

HSP 1 Score: 91.3 bits (225), Expect = 3.330e-19
Identity = 62/220 (28.18%), Postives = 106/220 (48.18%), Query Frame = 0
Query:   14 LWIDIETTGLDPATSEILEVNVIVTDASLVPWDSLHIVIHHPMNILMLKSSAWCKRKFSSKSYGGNGLFDSCHYANTTYEDAAFMLWNFFEFYTSNKVGTGRPQKHDRQFFDKTVGANGQNLSSYDVSNTAFSTK-SPHRLALLCGSTVHFDRGFIEYHFPALKRFLNHKNVDVTTLLETAKRFRPDILQAKPKPSSTHRAMDDILDSINLYRFFKEEVF 232
            +W+D+ETTGL+P   +I+E++ I+TD +L        ++    NI++ +     K++F  K          CH              NFF             Q H +    K +  + ++  S +     F  K  P  ++ +CG+T+  DR F+ YH P LK +  ++N+DV+++ E  KR++P IL  K K    HR   D+++SI   +F+KE +F
Sbjct:    9 IWVDLETTGLNPKIHKIIEISTIITDKNLN-------ILEIGPNIIIFQ-----KKEFLRKI---------CH--------------NFF-------------QIHKKNGLMKEIKNSKEDEKSAEKKTLKFLKKWIPKNISPICGNTISLDRNFLLYHMPKLKSYFYYRNIDVSSINELIKRWKPKILN-KIKKKKNHRTKSDLIESIQELKFYKENIF 179          
BLAST of mRNA_S-firma_M_contig9.19912.1 vs. uniprot
Match: A0A4V0WXK9_9ACTN (Oligoribonuclease n=4 Tax=Actinobacteria TaxID=201174 RepID=A0A4V0WXK9_9ACTN)

HSP 1 Score: 90.1 bits (222), Expect = 9.600e-19
Identity = 60/223 (26.91%), Postives = 103/223 (46.19%), Query Frame = 0
Query:   14 LWIDIETTGLDPATSEILEVNVIVTDASL-VPWDSLHIVIHHPMNILMLKSSAWCKRKFSSKSYGGNGLFDSCHYANTTYEDAAFMLWNFFEFYTSNKVGTGRPQKHDRQFFDKTVGANGQNLSSYDVSNTAFSTKSPHRLALLCGSTVHFDRGFIEYHFPALKRFLNHKNVDVTTLLETAKRFRPDILQAKPKPSSTHRAMDDILDSINLYRFFKEEVFDKV 235
            +W+D+E TGLDPAT  I+E+  ++TD  L +  +   +VI+ P  +L           F  + +  +GL  +   +  + E A      F       K     P                                   R   LCG+++  DR F+  + P ++ FL++++VDV+T+ E AKR+ P +  ++P  S THRA+DD+ +SI   +F++E VF ++
Sbjct:    3 VWMDLEMTGLDPATEVIVEIATLITDDELNIVAEGPDLVINQPETVLKAMDP------FVVEMHTTSGLLTAIRESTVSLEQAGAATLEFI------KQHIAEP-----------------------------------RTIPLCGNSIGTDRRFLAKYLPEIENFLHYRSVDVSTIKELAKRWYPGLEISRPTKSGTHRALDDVRESIRELKFYRENVFKEI 178          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9.19912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B5LWG6_9PHYC1.650e-9960.35Putative oligoribonuclease n=1 Tax=Feldmannia spec... [more]
Q6XM84_9PHYC6.750e-8956.90FirrV-1-A3 n=1 Tax=Feldmannia irregularis virus a ... [more]
D8LPG5_ECTSI1.220e-6645.30EsV-1-139 n=2 Tax=root TaxID=1 RepID=D8LPG5_ECTSI[more]
A0A835Z4U2_9STRA3.920e-3132.74Ribonuclease H-like domain-containing protein n=1 ... [more]
A0A836CDV0_9STRA1.220e-2930.23Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835ZEI1_9STRA1.780e-2929.80Ribonuclease H-like domain-containing protein n=2 ... [more]
A0A835YX31_9STRA6.830e-2730.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0V0R1R0_PSEPJ1.030e-2329.60Ribonuclease H-like domain n=1 Tax=Pseudocohnilemb... [more]
Q056X5_BUCCC3.330e-1928.18Oligoribonuclease n=1 Tax=Buchnera aphidicola subs... [more]
A0A4V0WXK9_9ACTN9.600e-1926.91Oligoribonuclease n=4 Tax=Actinobacteria TaxID=201... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 14..44
e-value: 1.7E-4
score: 22.2
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 146..235
e-value: 5.3E-24
score: 86.7
coord: 2..145
e-value: 1.2E-22
score: 82.2
NoneNo IPR availablePANTHERPTHR11046OLIGORIBONUCLEASE, MITOCHONDRIALcoord: 12..233
NoneNo IPR availablePANTHERPTHR11046:SF0OLIGORIBONUCLEASE, MITOCHONDRIALcoord: 12..233
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 11..232

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9contigS-firma_M_contig9:11895..12602 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9.19912.1mRNA_S-firma_M_contig9.19912.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9 11895..12602 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9.19912.1 ID=prot_S-firma_M_contig9.19912.1|Name=mRNA_S-firma_M_contig9.19912.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=236bp
KQISRDYDRYNPWLWIDIETTGLDPATSEILEVNVIVTDASLVPWDSLHI
VIHHPMNILMLKSSAWCKRKFSSKSYGGNGLFDSCHYANTTYEDAAFMLW
NFFEFYTSNKVGTGRPQKHDRQFFDKTVGANGQNLSSYDVSNTAFSTKSP
HRLALLCGSTVHFDRGFIEYHFPALKRFLNHKNVDVTTLLETAKRFRPDI
LQAKPKPSSTHRAMDDILDSINLYRFFKEEVFDKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR036397RNaseH_sf
IPR013520Exonuclease_RNaseT/DNA_pol3