prot_S-firma_M_contig8951.19854.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig8951.19854.1
Unique Nameprot_S-firma_M_contig8951.19854.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length233
Homology
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BLAST of mRNA_S-firma_M_contig8951.19854.1 vs. uniprot
Match: D8LFA6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFA6_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 4.060e-30
Identity = 90/154 (58.44%), Postives = 102/154 (66.23%), Query Frame = 0 
Query:   70 QVQMAGLQEKTLASRLAYERLQADKIAADVSRLRKAEEQKRLLGREATVAKERSAVAEEARRAAESRVSTLEDRLLSLGREEEKDSKAEAEAAEEATRTARSKANQIEALREKVARMEASVAAERTSREEAEQGLERALSAKGKLERFLEGVLR 223
            QVQMAGLQEK+LASRLAYERLQADK A+D+ R+RKAEEQKR L RE   AK++S                        G+EEEK S AEA+A     RT RSKA+Q + LREKVAR+EASV          EQGLERALSAK KLERFLEGVL+
Sbjct:    2 QVQMAGLQEKSLASRLAYERLQADKAASDL-RIRKAEEQKRQLARETASAKDKSXXXXXXXXXXXXXXXXXXXXXXXXGKEEEKSSSAEAKAXXXXXRTXRSKADQADVLREKVARVEASVRXXXXXXXXXEQGLERALSAKVKLERFLEGVLK 154
[Close]
BLAST of mRNA_S-firma_M_contig8951.19854.1 vs. uniprot
Match: A0A7R9YA16_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YA16_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 9.570e-12
Identity = 73/206 (35.44%), Postives = 118/206 (57.28%), Query Frame = 0 
Query:   20 SAGSKAVLSALRALQDKIRKLENERDRASVEAGTLRRQIAALQTENDRTAQVQMAGLQEKTLASRLAYERLQADKIAADVSRLRKAEEQKRLLGREATVAKERSAVAEEARRAAESRVSTLEDRLLSLGREEEKDSKAEAEAAEEATRTARSKANQIEA-LREKVARMEASVAAERTSREEAEQGLERALSAKGKLERFLEGVLRV 224
            S+GS+AVLSALRALQDKI++LE ER +A  E   L++Q+   +    R+ +++     E+  ASRLA ER+ A+K   ++ RL KAEE K  L +E    ++ ++ +E ARR A+  +S ++  +  L  E + D KA+   A E     R + +Q E  L   + ++E  +  E+T R E       A++ K +L+ FL+GV+ +
Sbjct:  225 SSGSRAVLSALRALQDKIKRLEGERSKALDEVNALKQQLEEAEASAKRSRELEKLTNSEQVHASRLANERVTAEKKVVEM-RLSKAEEHKASLRKEIDALRKAASESEIARRTADGNLSVVQGHVRELEGELD-DMKAQLAVAHEELAKERDERDQREIELGVVIQKIEEQLREEKTMRCE-------AVTEKERLDEFLKGVVAI 421
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig8951.19854.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFA6_ECTSI4.060e-3058.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9YA16_9STRA9.570e-1235.44Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 102..150
NoneNo IPR availableCOILSCoilCoilcoord: 162..196
NoneNo IPR availableCOILSCoilCoilcoord: 23..64
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..233
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig8951contigS-firma_M_contig8951:7..3961 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig8951.19854.1mRNA_S-firma_M_contig8951.19854.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig8951 7..3961 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig8951.19854.1 ID=prot_S-firma_M_contig8951.19854.1|Name=mRNA_S-firma_M_contig8951.19854.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=233bp
MGSARAAAAGAGAGTGWGASAGSKAVLSALRALQDKIRKLENERDRASVE
AGTLRRQIAALQTENDRTAQVQMAGLQEKTLASRLAYERLQADKIAADVS
RLRKAEEQKRLLGREATVAKERSAVAEEARRAAESRVSTLEDRLLSLGRE
EEKDSKAEAEAAEEATRTARSKANQIEALREKVARMEASVAAERTSREEA
EQGLERALSAKGKLERFLEGVLRVRKRERKGRG
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