mRNA_S-firma_M_contig946.20442.1 (mRNA) Sphaerotrichia firma Sfir_13m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_M_contig946.20442.1
Unique NamemRNA_S-firma_M_contig946.20442.1
TypemRNA
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Homology
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BLAST of mRNA_S-firma_M_contig946.20442.1 vs. uniprot
Match: A0A6H5JTB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB3_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 1.140e-45
Identity = 99/158 (62.66%), Postives = 121/158 (76.58%), Query Frame = 1 
Query:    1 MGAGMSASQLAALSVTEVADLISNSSLAQYRQACVDFGIDGNMLTKLPVDQLVGALGRAGVDDKQHLEFMVSEIENIRSPKIDPRKLDRKNLRELLDRSDSVDWDXXXXXXXXSGVSLDTDERILGLDIANRNLSGELPAALGEISKLEYLHATSNLF 474
            MG  MS  +L ALSV E+ADL       ++RQA +DFGIDG+MLT LP+DQL  AL RAGV+DKQHL +++ EIENIR PKIDP KLDR+NLR +L+RSDS D +        SGVS+D+D+RI+ L++ NR+LSGELPAAL EIS LEYLHATSNLF
Sbjct:    1 MGVAMSLEELGALSVVELADLAP----PEHRQASIDFGIDGHMLTSLPLDQLQDALARAGVEDKQHLVYLLEEIENIRRPKIDPSKLDRENLRAILERSDSGDHEELSGRSEWSGVSVDSDDRIIALNVTNRHLSGELPAALFEISNLEYLHATSNLF 154
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BLAST of mRNA_S-firma_M_contig946.20442.1 vs. uniprot
Match: D7FPI3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI3_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 1.790e-43
Identity = 211/283 (74.56%), Postives = 227/283 (80.21%), Query Frame = 2 
Query: 1004 KIQPRTFSALSSSLVYLNLSHNAFEGALPLAALSPLSAGETASSSRGSDSGTTSEEQ-RSRRERRGEVAAGMMVFSSLSYVNLSNNKFAGLVSRRVGELTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGLSGWLDGANGEAFGRLTLLETLRLDGNTFEGTVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSLRLEENPSLQGPIPAPLASRPECAVRADELVVEDTEATMLGSKLDAWFLMPRKAR 1849
            KI P   SALSSSLVYLNL HNAFEG LP++ LSP SAG      RGS SG+ SE Q RS R RR E AAG++  S LSY+NL +NKF G VS  +G LT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   SG L+G +G   GRL+ LETLRLDGNTF G VP  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   RLEENPSL+GPIP  LAS   C VRAD+ V++DTEATMLGS+LD WFLMPRKAR
Sbjct:  242 KIHPHVLSALSSSLVYLNLGHNAFEGDLPVSPLSPHSAGGRVR--RGSTSGSPSEGQGRSSRRRRSESAAGVVSASPLSYLNLCHNKFTGRVSEEIGSLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGILEGDDGGGLGRLSSLETLRLDGNTFHGIVPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLEENPSLRGPIPDQLASGVNCNVRADQPVLDDTEATMLGSRLDEWFLMPRKAR 522
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig946.20442.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JTB3_9PHAE1.140e-4562.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPI3_ECTSI1.790e-4374.56Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig946contigS-firma_M_contig946:2176..9477 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score178.3
Seed ortholog evalue1.1e-41
Seed eggNOG ortholog2880.D7FPI3
GOsGO:0000003,GO:0001704,GO:0001706,GO:0003006,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006810,GO:0006833,GO:0006950,GO:0007275,GO:0007369,GO:0007389,GO:0007492,GO:0008104,GO:0008150,GO:0009505,GO:0009531,GO:0009611,GO:0009653,GO:0009790,GO:0009791,GO:0009793,GO:0009798,GO:0009888,GO:0009987,GO:0010154,GO:0010453,GO:0010470,GO:0016020,GO:0022414,GO:0022603,GO:0030104,GO:0030154,GO:0030312,GO:0032501,GO:0032502,GO:0033036,GO:0035987,GO:0042044,GO:0042592,GO:0042659,GO:0044426,GO:0044462,GO:0044464,GO:0045184,GO:0045595,GO:0045995,GO:0048226,GO:0048316,GO:0048598,GO:0048608,GO:0048646,GO:0048731,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051239,GO:0051302,GO:0055065,GO:0055067,GO:0055075,GO:0055080,GO:0061458,GO:0065001,GO:0065007,GO:0065008,GO:0071944,GO:0090558,GO:0090708,GO:0098771,GO:0099402,GO:1903224,GO:1905392,GO:1905421,GO:2000026,GO:2000067,GO:2000280
EggNOG free text desc.Leucine rich repeat N-terminal domain
EggNOG OGs2QV35@2759,COG4886@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons14
Model size2644
Cds size1833
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828779.5276773-UTR-S-firma_M_contig946:2175..24031622828779.5276773-UTR-S-firma_M_contig946:2175..2403Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig946 2176..2403 +
1697105157.6690655-UTR-S-firma_M_contig946:2175..24031697105157.6690655-UTR-S-firma_M_contig946:2175..2403Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig946 2176..2403 +
1622828779.5423143-UTR-S-firma_M_contig946:2694..29441622828779.5423143-UTR-S-firma_M_contig946:2694..2944Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig946 2695..2944 +
1697105157.6830482-UTR-S-firma_M_contig946:2694..29441697105157.6830482-UTR-S-firma_M_contig946:2694..2944Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig946 2695..2944 +
1622828779.5553794-UTR-S-firma_M_contig946:3173..34011622828779.5553794-UTR-S-firma_M_contig946:3173..3401Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig946 3174..3401 +
1697105157.694769-UTR-S-firma_M_contig946:3173..34011697105157.694769-UTR-S-firma_M_contig946:3173..3401Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig946 3174..3401 +
1622828779.5744598-UTR-S-firma_M_contig946:3742..38471622828779.5744598-UTR-S-firma_M_contig946:3742..3847Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig946 3743..3847 +
1697105157.7054849-UTR-S-firma_M_contig946:3742..38471697105157.7054849-UTR-S-firma_M_contig946:3742..3847Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig946 3743..3847 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828779.594082-CDS-S-firma_M_contig946:3847..38621622828779.594082-CDS-S-firma_M_contig946:3847..3862Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig946 3848..3862 +
1697105157.7165492-CDS-S-firma_M_contig946:3847..38621697105157.7165492-CDS-S-firma_M_contig946:3847..3862Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig946 3848..3862 +
1622828779.6093948-CDS-S-firma_M_contig946:4277..43631622828779.6093948-CDS-S-firma_M_contig946:4277..4363Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig946 4278..4363 +
1697105157.7274742-CDS-S-firma_M_contig946:4277..43631697105157.7274742-CDS-S-firma_M_contig946:4277..4363Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig946 4278..4363 +
1622828779.6389647-CDS-S-firma_M_contig946:4564..46461622828779.6389647-CDS-S-firma_M_contig946:4564..4646Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig946 4565..4646 +
1697105157.7420206-CDS-S-firma_M_contig946:4564..46461697105157.7420206-CDS-S-firma_M_contig946:4564..4646Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig946 4565..4646 +
1622828779.6559415-CDS-S-firma_M_contig946:4948..55061622828779.6559415-CDS-S-firma_M_contig946:4948..5506Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig946 4949..5506 +
1697105157.7538998-CDS-S-firma_M_contig946:4948..55061697105157.7538998-CDS-S-firma_M_contig946:4948..5506Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig946 4949..5506 +
1622828779.6731143-CDS-S-firma_M_contig946:5828..59211622828779.6731143-CDS-S-firma_M_contig946:5828..5921Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig946 5829..5921 +
1697105157.7657237-CDS-S-firma_M_contig946:5828..59211697105157.7657237-CDS-S-firma_M_contig946:5828..5921Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig946 5829..5921 +
1622828779.689589-CDS-S-firma_M_contig946:6296..65391622828779.689589-CDS-S-firma_M_contig946:6296..6539Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig946 6297..6539 +
1697105157.7749057-CDS-S-firma_M_contig946:6296..65391697105157.7749057-CDS-S-firma_M_contig946:6296..6539Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig946 6297..6539 +
1622828779.7050807-CDS-S-firma_M_contig946:6928..71111622828779.7050807-CDS-S-firma_M_contig946:6928..7111Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig946 6929..7111 +
1697105157.7846153-CDS-S-firma_M_contig946:6928..71111697105157.7846153-CDS-S-firma_M_contig946:6928..7111Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig946 6929..7111 +
1622828779.7211144-CDS-S-firma_M_contig946:7597..77941622828779.7211144-CDS-S-firma_M_contig946:7597..7794Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig946 7598..7794 +
1697105157.7942395-CDS-S-firma_M_contig946:7597..77941697105157.7942395-CDS-S-firma_M_contig946:7597..7794Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig946 7598..7794 +
1622828779.7341373-CDS-S-firma_M_contig946:8354..84931622828779.7341373-CDS-S-firma_M_contig946:8354..8493Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig946 8355..8493 +
1697105157.8037028-CDS-S-firma_M_contig946:8354..84931697105157.8037028-CDS-S-firma_M_contig946:8354..8493Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig946 8355..8493 +
1622828779.7462163-CDS-S-firma_M_contig946:8808..89641622828779.7462163-CDS-S-firma_M_contig946:8808..8964Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig946 8809..8964 +
1697105157.8158715-CDS-S-firma_M_contig946:8808..89641697105157.8158715-CDS-S-firma_M_contig946:8808..8964Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig946 8809..8964 +
1622828779.7601523-CDS-S-firma_M_contig946:9396..94771622828779.7601523-CDS-S-firma_M_contig946:9396..9477Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig946 9397..9477 +
1697105157.8252287-CDS-S-firma_M_contig946:9396..94771697105157.8252287-CDS-S-firma_M_contig946:9396..9477Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig946 9397..9477 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig946.20442.1prot_S-firma_M_contig946.20442.1Sphaerotrichia firma Sfir_13m malepolypeptideS-firma_M_contig946 3848..9477 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_M_contig946.20442.1

>prot_S-firma_M_contig946.20442.1 ID=prot_S-firma_M_contig946.20442.1|Name=mRNA_S-firma_M_contig946.20442.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=611bp
MRSLQVLDLTSNALQGHIPESLGGMTDLRELWLGGNNFVGVIPETLSKLD
DLQSLDLSRNKFAGKIQPRTFSALSSSLVYLNLSHNAFEGALPLAALSPL
SAGETASSSRGSDSGTTSEEQRSRRERRGEVAAGMMVFSSLSYVNLSNNK
FAGLVSRRVGELTSLDTLDLSCNKLEGEVPPDIGNCVALRVLSLSRCGLS
GWLDGANGEAFGRLTLLETLRLDGNTFEGTVPASFGKLTRLEVLQLQCNC
FNGQLPSTLGRLERLWAFTVRDNNLSGRVPDSLGRLTRLRSLRLEENPSL
QGPIPAPLASRPECAVRADELVVEDTEATMLGSKLDAWFLMPRKARETAS
YSTSRILGSAFLNLQEFPGYTSVRPSLLRHVSTVVPYECHIFTGVKGHRL
VVRRKEIAFLSHCWDLPPDQCPPKPDLLGGPHPDTPDRTKLRHMKACLRE
APEAVRYVWLDMLCVPLAESKRRRAAGRSVPFFVQNSGRFYVVAPDSPSL
ERHKKRAWCRLEALCAACPYQPCQLESAFSTKPAWNSAAARFVYDAVEFF
VSTWEKGNRYEERLTGRDELEAGGFLRDPVIGKVLSDPKDRQDIAEATLG
AVNAMEVAGRI
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mRNA from alignment at S-firma_M_contig946:2176..9477+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_M_contig946.20442.1 ID=mRNA_S-firma_M_contig946.20442.1|Name=mRNA_S-firma_M_contig946.20442.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=7302bp|location=Sequence derived from alignment at S-firma_M_contig946:2176..9477+ (Sphaerotrichia firma Sfir_13m male)
ATGGGTGCAGGGATGTCAGCGAGTCAACTCGCGGCGCTCAGCGTTACCGA
AGTTGCGGATTTGATCTCCAACTCATCGCTTGCCCAATATCGTCAGGCAT
GTGTAGACTTTGGCATCGATGGGAACATGCTGACAAAGCTCCCCGTGGAC
CAGCTCGTGGGTGCCCTCGGTCGTGCTGGTGTGGACGACAAGCAACACTT
GGAATTTATGGTGTCGGAAATTGAGAACGTGAGAGGCCGTGTCGAACCTT
CCAATCCATCCATTTGCAGAAGTCTAAACTGCCCCGTGTGCTTGAAGCGC
TCCATTTGAATGCTCGTGTTGAAATCAAACAGAACATGGTGTATCAAAAA
TTGAACCTCCACCAGAGACTAGACTACTGTGTGATAAATGGACGATCTCC
GTGCAGCAGTGATGTCAACACTCTGGCGGAGTAGGAGTTTTCGCCCTATG
GAAGTTCTTGTGATTCTCCCCGTTCCAACACATGCCGACCGCGCCTCCGC
CGAACTGCGCAAAACCCAGATTCGATCGCCTAAGATCGACCCCAGAAAAC
TCGATCGAAAAAATTTACGTGAGCTTCTTGATCGATCTGACTCCGTCGAC
TGGGACGAGCGATCGGATACGTCCGAGTGGAGCGGTGTTTCCCTCGACAC
CGATGAGAGGATCCTTGGGCTCGATATCGCCAACAGAAACCTCTCCGGCG
AGCTGCCTGCCGCTCTGGGGGAGATATCGAAGCTTGAGTACCTCCACGCT
ACTTCGAACTTGTTTAGCGGTGAGCGAAAATGGGGGCGTTTTCCCGTGAA
AGTAGTATTGCGCTGCGCTGTGCTTGTGAGGGAAGGTTTCCTGGTATACA
AGGAAGGGCGAGTCAACAGCAGTGTTTGCTGAGGCAGATGTGTACAAGCG
CATAACATGTGCACTGGGTAACTGTAAATCTTTGTTTACTCCATGTTTTG
CTCGCACCTGACTCTTAATTGCCCTGTCCCGTGCCTACCCAAATGCAGGG
GTGATTCCGGACGCGATCGGTGGACTGAGATGCCTCACCTCGCTTAGACT
TGACCACAACAGCCTCTCGGGGCGGCTGCCTGGTGCGCTGACCCGTTTAA
CGAGTCTCACGGTTCTTGACTTGGCATGGAATAAGCTCACAGGCACAATT
CCGATGAAGGTCGGCACCATGACCACCCTTCGCAGCCTCAACTTGGGCAT
GAACAAGGCGAGATGACAACAAGCATGTGATCCTCGCCGAGCCCGCGGGT
CTATTCATCAACGATCCTCGCTGTAGTCGATACAATCGTGTAGTTTCTCA
ACGCTTGTCGTCTGTTTTAAATACTGTCATAGACCACCCAACTCAGAACG
GCTGTGTCGATACTGCCCCACCCGTCGAAGCGTCCACAACGGTTTGTCGA
CCGTAGTACGCCAGCCTGGGTTCAACGATTCTCCTTGGAGTGTTTTCACC
AGTCAAAACTAACCAGGTTTTTGCCGTACTAATGGCCCGGAGGTGAATGA
CTCTTGATGGCGTTGGATGTTTCAACTCTCGACGCCTTAATCCGCTCCGT
CTGTTTTCCGAATCTAGCTAAACGGTGCGATTCCCAGGGAGCTGGCCTCC
TTGCACTTCCTCGTCGAGCTGCGCGTGCGAGAAAACAAGCTTGCGGGAAA
GATACCGCCGTTGTTGAGCAACATGCGTTCACTCCAGGTACACGCTGTTC
TTCCACGTCGTCGACAAAGGCGGTACCTGCGTATCAGTTCCGGGCTTGCT
TTTTCGGTTAAGCTGCCCAAGCAAACCTGACCCGCGAGCCCACAAATGAA
CAAGTACCCAGGCACCCTGAACTCCGCCGCATATTGAAAGGTTATGGGTA
GGAAAGTGATCTTGATTTGATTGGTTTGTGTGTGGCACACTGCACTATTT
TGCCAGGTATTTTCCAATCCAGATGTCCAATACGAATTGTTAGATTCTAC
CGAGCAACCTGCTGAACGGCCGATAAAACCTCGCGAGGCAAGGTGATGAT
GCCCTCCGACATCACAGCAAAAACCCTCCTCAAGAAACACATTGAAACCA
AACAATAAAAAAAAACGCTCACACATTTGAATTGTTCGACTGCGGTGATC
AGGTTCTCGACCTGACCTCGAACGCGCTCCAAGGTCATATCCCGGAAAGC
CTGGGTGGAATGACGGATCTGCGCGAGCTTTGGCTAGGGTGAGCTGAGTC
AGATTTCACCAAAATCTCCGCTAGCTTAGCCGTAATTTCGCGTTTGTTTT
GAATTTCCACGATAAACCCCACACATCGATGGCGAAGCTAGAAACAGCGA
AGCTGCTCATCGTGTTTTTCATTTTGCTCGACTATTTGGAAATTCTGCGA
TCCAACGGCCCTCTCGTTTGATGCCTTACGTTTCGACAGCGGAAACAATT
TCGTCGGAGTGATCCCGGAAACCCTAAGCAAGCTGGACGACCTTCAAAGC
CTCGATTTATCTCGCAACAAGGTCAGAGTGCTACGCAGAGCAAGGAGAGT
ACGACACCGGCTAGTTTTGCGTTGAGCTCAGCTTGCACGCTCTGCCTTAG
GCAACCGTATTTCTTTCGAGCCAACAGCCGATAGAGTAAGAGAGAACTAC
TACTGCGCTGTCAACAATACATCGGCGTGCTGTTTCCGTTAACGTACTCG
GTGTCGGCTTTCGAGTTGAACTTCGCCGTACCGCCACCGCCGCCACCACA
CCACACCAGCAGCGCGCCACATTCTTCCGCTATGCGCGCTTGTGCTGTCC
AACCAACACCCGCTGCACCACAGTTCGCCGGAAAGATACAGCCGCGTACA
TTCAGCGCGCTGTCTTCGTCATTGGTCTACCTCAACCTCAGCCACAATGC
GTTTGAAGGGGCCCTCCCGCTCGCCGCGCTGTCGCCGCTCTCGGCGGGCG
AGACGGCTTCGTCTTCGAGAGGGTCGGACTCCGGGACTACATCCGAAGAG
CAGAGGAGTCGAAGAGAGAGGCGGGGGGAGGTTGCGGCGGGGATGATGGT
GTTCTCGTCGCTCTCCTACGTCAACCTCTCGAACAACAAGTTTGCCGGCC
TGGTTTCCAGGCGAGTAGGGGAGCTGACCTCGCTGGACACGCTGGACTTG
TCTTGCAACAAGCTGGAAGGCGAGGTCCCTCCCGACATCGGAAACTGTGT
CGCCCTTCGCGTGCTGTCCCTTTCCCGGTGCGGCCTCTCGGGGTGGTTGG
ACGGGGCCAACGGGGAGGCGTTCGGAAGGCTAACTCTGCTGGAAACCCTT
CGACTAGACGGGAACACGTTTGAAGGGACTGTGCCCGCGTCGTTCGGAAA
ATTGACCCGGCTCGAAGTTCTTCAGCTGCAGGTTTGATTTTATTTTATTT
CAGCAGAGCCAAGAAGCTGTCGTGGTATTAGACGCGACGGAGAGGAAAGG
GTGTGGAGTTGTAGGCTCGGTGAGTATGGATACCGTGTGCGCTCCACGCT
GCAGAGCTTTGGACAAGGACTGCGTTTTCATAGTATTCGAATCGCTGATG
GATGAGACTAGCAGCATTTTTTCTTGCTGGGTCCGATTTACGACCGGATA
CACACAGTATTGCTTACTGGCCCTTGCCACAACGCAAATAGATCTTTCTC
GTTCTTTTTGTGGCTGCCTCGTGTTGTTGCTGTGCTGATGATGTGTATTC
AAGTGCAACTGCTTCAATGGACAGCTGCCATCAACCCTAGGGCGGCTGGA
GCGGTTGTGGGCGTTCACGGTCCGAGACAACAACCTTTCGGGCAGGGTAT
GTGTTTTGTGTAGAACGACATCTACATGTGAAGAGGGTTCATACCATATT
GTTCAGTTGCTGCGTTTGCTGCTACTGGTGGGAGCAAACCTGCGCAAACT
CCGAATTTTGGCACTCAGCAAGTGCACGGCGTGAAAAACAAAAAGTAAAG
TAACCACCTACTCGTACTACATAGGTGGAAGATTGATAGCTTCTCCATTT
CTCTCCGTGCTTGATCGGCGGCACGCTATTGCAAGCATGATGGTTTGCTG
CTCTCCTCGTCAAAACCAATGATCTATCTCGGGTTGAACACCCGCCAACG
CGCAAAGACAAGACAAAACCGACCACGAAAAACCCAACCGCGCAATCGTT
GCACCCAACACGGGGTATCAGGTACCCGACTCTCTCGGTCGTCTTACTCG
GCTGCGATCTCTCCGCCTCGAGGAGAACCCTTCTCTCCAAGGCCCGATCC
CTGCACCACTCGCGTCTCGGCCGGAATGCGCCGTGCGCGCAGACGAGCTG
GTGGTGGAAGACACGGAGGCGACCATGCTCGGGTCCAAGCTGGATGCGTG
GTTCTTGATGCCACGGAAGGCGAGAGAGACAGCAAGCTACAGTACAAGCC
GTATTTTGGGATCAGTGTTTGCATCAGATAGTGATAAGGCTGTCACGAAA
GCGTGAGACGTGCGCCGAGTTGGACTGTTCTTCGAAAAGTCGAAAACATG
AGCGAGATGTCATTCGAGCGGACGCGAGTCCAGGGACTGACTGCAGAGGA
GGGAAGCGGGGTATTTTGGGGTCGTTTCCCAAACAACCGGTAGTTCGCTC
TTCTCATGGATATCTGATCGGGACTGGAGTGTGGTCGCCGTTGGTACTGT
GATTGCCGCCGAATGCGCCCTGAAGTGGTTCGGCTGCTGAACCCTCTAAA
CACCGAATGAGCCGTGAGCCCTGCAACACACGACAGACATATCGATGACC
TACTTGTACCTTGCCGTGTTTTCTTCTTTTCGTCGTTTTTCGCGCGGCGC
CAGGCGTTTCTCAACTTGCAGGAATTCCCTGGGTACACCTCCGTGCGTCC
CAGCCTGCTTCGGCACGTTTCTACCGTGGTGCCATACGAATGCCACATCT
TTACCGGCGTAAAGGGCCACAGGCTTGTCGTCCGTCGGAAGGAAATAGCA
TTCTTGTCTCACTGCTGGGATCTGCCGCCGGATCAGGTGTGTAGCAAATA
GCACATACATGGTACATGGTACGGGCAGCGGTGGCTGGTTTGTGATGGAC
CAGTACCCACGTCAGTACCCGCGCGGGTTTGAGTTGATTCATGGCAAATA
TATGGTTGCGAAGCTTAACAACACTTGGCACAGGGCTCAATCCGCTTCGC
GGTCCCCAACTATCTTCTAAGCACGAAGAATGCGGAAGGTCTACCGATGC
GCGCCTCGTTTGTCAAGACCTGAACAGACTTCTGGTCTCGGCGGACAGGC
TACTGTAGGAGACAAGAGCTCACCACTCAAGCATGCGTCTCAAAAGCTCA
CTTGTTCAAGTCTTTCTCGTGTCCATCCTCTCAATCCGACTGAACGCTAA
CGAGAGCCTTCCCACACTGCTCGTGCGCGCCCGCCCCGTTTCTCCCTACG
ATCCGCTACTTCTACGGCGAAACAACAACAAATGCTCAACCCAAAAAAAA
ACACAACAAATAATGCCAACAGTGTCCCCCAAAGCCCGACCTCTTGGGCG
GACCACACCCAGACACCCCCGACCGCACCAAGCTCAGGCACATGAAGGCA
TGCCTGCGGGAAGCCCCCGAGGCCGTCCGGTACGTCTGGCTCGACATGCT
CTGTGTGCCGCTCGCGGAGTCGAAGCGTCGGAGGGCGGCGGGGCGCTCGG
TTCCTTTCTTCGTGCAAAAGTGAGGACAAGAAGAGGAGAGGGTTGAGCGA
CGTGACCACCGCGCCTTGCGTGTTTGTTCTTAATTTAGTGGCATTCTGGC
CTTGTGTTTGCCTGTCTGTGTGCCGTGAGCGGAGAGAGGAAAGAGTTTCA
GACACCAAGTCCAACGCTTTGTGGAGGGAGGGAGATGCCGAAAGAGAAGC
TTTGCAGGGGAGGGTTGCAGGCGCGCAAGCAAAAGTGGACTTCGCAATAT
TTTAGCGGCAGTGCGTACCACCCAACCTCGAGTGCGAGGGGGAAGAAATT
GACATCCACCTTCCTTCGCGAGGCGTCGATGTATGTATCATCGCTTCTGT
GGGTTCGTAGTCGCCAACTTCTTGCTTCACTCCCGCCGAAAAGCCTTCCC
TGCTATGTTTCCTTCGCGACAAGCACGCATAAAGATCAGCTCCGAATCCA
AAGGTGTCCCGCTTCAGATCGTTCATCATCTAGCGTGCGCTCCTTTTTTT
TTACTGCCAGCTTGCTCATACACCATCCCGCGTGTCTGTTGCTTTGCGTG
CCCGATGAATGAACGGATGGATTGAAAAGCTCCGGAAGGTTCTACGTTGT
GGCGCCAGACAGCCCCAGCCTCGAACGGCACAAGAAGCGCGCTTGGTGCA
GGCTTGAGGCCCTCTGCGCGGCATGCCCCTACCAGCCTTGCCAGCTTGAA
TCTGCCTTCTCGACCAAGGTGTGTGATGGATGCTGTGTTGTTGCGCACAA
CACGCTGAGGACACGAGAATAAACATCTTGCATGCACACCGCTGGAGGAT
GTGGCTTGTTGTGCTCCTTGAGGTTGTTCCCGTCAGGTGTTGAGCCGATT
GAAAATGCGTCATAAAACCTGTTGCCCCCAGGGCAATGACTGTCCACTAC
CTACAATTTTCGGACTGAGCCGACGTTGACGAGCCGAAGGCGTTTTTACC
GCCCTCCGCCCTATCGTATTCATGCGGCCGGCGGCTTTTTCTTTCGTCGA
TCACACCTTCTCGGGGGCGGGATTTTGGGGCAGCCCGCTTGGAACTCGGC
GGCGGCGCGTTTCGTTTACGACGCTGTTGAGTTCTTCGTGAGCACATGGG
AGAAAGGCAACCGATACGAGGAACGACTCACAGGGCGCGACGAGCTGGAA
GCAGGCGGCTTCCTGCGCGACCCGGTGATCGGCAAGGTAGTACAAGTATT
CGCACGCGTGGGCCACCTCTGAAAATGGCAGCTGCGCGAACACCTTGCTC
TCCTTTCTTGCGGCCGTACTAGTCTTTACTAGACTAAATACTTCGAAGTA
TATACGAAGTAGACGACCTTGTATAAGGGCAAACTTCTGCAGAGAACGAA
TATGCACCATTGCTCAAATCAACGCGGCTGGTCTTCGGCCTGCTCAGGCA
CGACCCGAGGTTGGCAGTACCTCTCAACGTCCCGTCAACTTTCCCCCGAG
AAATGCCCATGTGCAACATCATTGACCCCTCGTATGTTGCGGTTGGATCC
TCACACCCCTTAAAACGAAACTCCCACCCGCTTGTGGACAAAATTGATCG
CGTGCTGTCTGGAAAATATCTCCCGAACTGCATGCCTAACGGCTGCAAAA
AACACGCACAAACGAACCCAGCTGAGCGACCCCAAGGATCGCCAGGACAT
CGCCGAGGCCACGCTCGGAGCGGTCAACGCGATGGAGGTCGCCGGCCGGA
TC
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Coding sequence (CDS) from alignment at S-firma_M_contig946:2176..9477+

>mRNA_S-firma_M_contig946.20442.1 ID=mRNA_S-firma_M_contig946.20442.1|Name=mRNA_S-firma_M_contig946.20442.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=3666bp|location=Sequence derived from alignment at S-firma_M_contig946:2176..9477+ (Sphaerotrichia firma Sfir_13m male)
ATGCGTTCACTCCAGATGCGTTCACTCCAGGTTCTCGACCTGACCTCGAA
CGCGCTCCAAGGTCATATCCCGGAAAGCCTGGGTGGAATGACGGATCTGC
GCGAGCTTTGGCTAGGGTTCTCGACCTGACCTCGAACGCGCTCCAAGGTC
ATATCCCGGAAAGCCTGGGTGGAATGACGGATCTGCGCGAGCTTTGGCTA
GGCGGAAACAATTTCGTCGGAGTGATCCCGGAAACCCTAAGCAAGCTGGA
CGACCTTCAAAGCCTCGATTTATCTCGCAACAAGCGGAAACAATTTCGTC
GGAGTGATCCCGGAAACCCTAAGCAAGCTGGACGACCTTCAAAGCCTCGA
TTTATCTCGCAACAAGTTCGCCGGAAAGATACAGCCGCGTACATTCAGCG
CGCTGTCTTCGTCATTGGTCTACCTCAACCTCAGCCACAATGCGTTTGAA
GGGGCCCTCCCGCTCGCCGCGCTGTCGCCGCTCTCGGCGGGCGAGACGGC
TTCGTCTTCGAGAGGGTCGGACTCCGGGACTACATCCGAAGAGCAGAGGA
GTCGAAGAGAGAGGCGGGGGGAGGTTGCGGCGGGGATGATGGTGTTCTCG
TCGCTCTCCTACGTCAACCTCTCGAACAACAAGTTTGCCGGCCTGGTTTC
CAGGCGAGTAGGGGAGCTGACCTCGCTGGACACGCTGGACTTGTCTTGCA
ACAAGCTGGAAGGCGAGGTCCCTCCCGACATCGGAAACTGTGTCGCCCTT
CGCGTGCTGTCCCTTTCCCGGTGCGGCCTCTCGGGGTGGTTGGACGGGGC
CAACGGGGAGGCGTTCGGAAGGCTAACTCTGCTGGAAACCCTTCGACTAG
ACGGGAACACGTTTGAAGGGACTGTGCCCGCGTCGTTCGGAAAATTGACC
CGGCTCGAAGTTCTTCAGCTGCAGTTCGCCGGAAAGATACAGCCGCGTAC
ATTCAGCGCGCTGTCTTCGTCATTGGTCTACCTCAACCTCAGCCACAATG
CGTTTGAAGGGGCCCTCCCGCTCGCCGCGCTGTCGCCGCTCTCGGCGGGC
GAGACGGCTTCGTCTTCGAGAGGGTCGGACTCCGGGACTACATCCGAAGA
GCAGAGGAGTCGAAGAGAGAGGCGGGGGGAGGTTGCGGCGGGGATGATGG
TGTTCTCGTCGCTCTCCTACGTCAACCTCTCGAACAACAAGTTTGCCGGC
CTGGTTTCCAGGCGAGTAGGGGAGCTGACCTCGCTGGACACGCTGGACTT
GTCTTGCAACAAGCTGGAAGGCGAGGTCCCTCCCGACATCGGAAACTGTG
TCGCCCTTCGCGTGCTGTCCCTTTCCCGGTGCGGCCTCTCGGGGTGGTTG
GACGGGGCCAACGGGGAGGCGTTCGGAAGGCTAACTCTGCTGGAAACCCT
TCGACTAGACGGGAACACGTTTGAAGGGACTGTGCCCGCGTCGTTCGGAA
AATTGACCCGGCTCGAAGTTCTTCAGCTGCAGTGCAACTGCTTCAATGGA
CAGCTGCCATCAACCCTAGGGCGGCTGGAGCGGTTGTGGGCGTTCACGGT
CCGAGACAACAACCTTTCGGGCAGGTGCAACTGCTTCAATGGACAGCTGC
CATCAACCCTAGGGCGGCTGGAGCGGTTGTGGGCGTTCACGGTCCGAGAC
AACAACCTTTCGGGCAGGGTACCCGACTCTCTCGGTCGTCTTACTCGGCT
GCGATCTCTCCGCCTCGAGGAGAACCCTTCTCTCCAAGGCCCGATCCCTG
CACCACTCGCGTCTCGGCCGGAATGCGCCGTGCGCGCAGACGAGCTGGTG
GTGGAAGACACGGAGGCGACCATGCTCGGGTCCAAGCTGGATGCGTGGTT
CTTGATGCCACGGAAGGCGAGAGAGACAGCAAGCTACAGTACAAGCCGTA
TTTTGGGATCAGTACCCGACTCTCTCGGTCGTCTTACTCGGCTGCGATCT
CTCCGCCTCGAGGAGAACCCTTCTCTCCAAGGCCCGATCCCTGCACCACT
CGCGTCTCGGCCGGAATGCGCCGTGCGCGCAGACGAGCTGGTGGTGGAAG
ACACGGAGGCGACCATGCTCGGGTCCAAGCTGGATGCGTGGTTCTTGATG
CCACGGAAGGCGAGAGAGACAGCAAGCTACAGTACAAGCCGTATTTTGGG
ATCAGCGTTTCTCAACTTGCAGGAATTCCCTGGGTACACCTCCGTGCGTC
CCAGCCTGCTTCGGCACGTTTCTACCGTGGTGCCATACGAATGCCACATC
TTTACCGGCGTAAAGGGCCACAGGCTTGTCGTCCGTCGGAAGGAAATAGC
ATTCTTGTCTCACTGCTGGGATCTGCCGCCGGATCAGGCGTTTCTCAACT
TGCAGGAATTCCCTGGGTACACCTCCGTGCGTCCCAGCCTGCTTCGGCAC
GTTTCTACCGTGGTGCCATACGAATGCCACATCTTTACCGGCGTAAAGGG
CCACAGGCTTGTCGTCCGTCGGAAGGAAATAGCATTCTTGTCTCACTGCT
GGGATCTGCCGCCGGATCAGTGTCCCCCAAAGCCCGACCTCTTGGGCGGA
CCACACCCAGACACCCCCGACCGCACCAAGCTCAGGCACATGAAGGCATG
CCTGCGGGAAGCCCCCGAGGCCGTCCGGTACGTCTGGCTCGACATGCTCT
GTGTGCCGCTCGCGGAGTCGAAGCGTCGGAGGGCGGCGGGGCGCTCGGTT
CCTTTCTTCGTGCAAAATGTCCCCCAAAGCCCGACCTCTTGGGCGGACCA
CACCCAGACACCCCCGACCGCACCAAGCTCAGGCACATGAAGGCATGCCT
GCGGGAAGCCCCCGAGGCCGTCCGGTACGTCTGGCTCGACATGCTCTGTG
TGCCGCTCGCGGAGTCGAAGCGTCGGAGGGCGGCGGGGCGCTCGGTTCCT
TTCTTCGTGCAAAACTCCGGAAGGTTCTACGTTGTGGCGCCAGACAGCCC
CAGCCTCGAACGGCACAAGAAGCGCGCTTGGTGCAGGCTTGAGGCCCTCT
GCGCGGCATGCCCCTACCAGCCTTGCCAGCTTGAATCTGCCTTCTCGACC
AAGCTCCGGAAGGTTCTACGTTGTGGCGCCAGACAGCCCCAGCCTCGAAC
GGCACAAGAAGCGCGCTTGGTGCAGGCTTGAGGCCCTCTGCGCGGCATGC
CCCTACCAGCCTTGCCAGCTTGAATCTGCCTTCTCGACCAAGCCCGCTTG
GAACTCGGCGGCGGCGCGTTTCGTTTACGACGCTGTTGAGTTCTTCGTGA
GCACATGGGAGAAAGGCAACCGATACGAGGAACGACTCACAGGGCGCGAC
GAGCTGGAAGCAGGCGGCTTCCTGCGCGACCCGGTGATCGGCAAGGTACC
CGCTTGGAACTCGGCGGCGGCGCGTTTCGTTTACGACGCTGTTGAGTTCT
TCGTGAGCACATGGGAGAAAGGCAACCGATACGAGGAACGACTCACAGGG
CGCGACGAGCTGGAAGCAGGCGGCTTCCTGCGCGACCCGGTGATCGGCAA
GGTACTGAGCGACCCCAAGGATCGCCAGGACATCGCCGAGGCCACGCTCG
GAGCGGTCAACGCGATGGAGGTCGCCGGCCGGATCCTGAGCGACCCCAAG
GATCGCCAGGACATCGCCGAGGCCACGCTCGGAGCGGTCAACGCGATGGA
GGTCGCCGGCCGGATC
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