mRNA_S-firma_M_contig8943.19846.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig8943.19846.1 vs. uniprot
Match: D8LT66_ECTSI (Probable 3\',5\'-cyclic phosphodiesterase pde-4 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT66_ECTSI) HSP 1 Score: 310 bits (793), Expect = 5.240e-97 Identity = 150/170 (88.24%), Postives = 161/170 (94.71%), Query Frame = 1
Query: 1 RDDRTPTAFVANGPSSYTSGSDFDFTCDEEACYYEIRVFDADESLEVVAWTDRVDSVDVSFLNRWRGGPGTGEYILYVRAVDAAGNADFSFRDTLNMYTWTYVSPLPWGIIVPLFFGSVILLIVLYIEYRRRKKKRAMERYALKRMRRKFKQQQKNQAKDVNWRDMYDDK 510
RDDRTPTAFVA+GPSSYTSGSDFDFTCDEE CYYE+RVFD DESLEVVAWTDRV+S DVSFLNRWRGGPGTGEYILYVRAVDAAGNADFS+R+TLNM+TWTYVSPLPW IIVP+FF V L++ LY+EYRRRKKKRAMERYA+KRMRRKFKQQQK QAKDVNWRDMYDDK
Sbjct: 739 RDDRTPTAFVASGPSSYTSGSDFDFTCDEEVCYYEVRVFDGDESLEVVAWTDRVESADVSFLNRWRGGPGTGEYILYVRAVDAAGNADFSYRETLNMHTWTYVSPLPWRIIVPVFFSGVFLILFLYVEYRRRKKKRAMERYAMKRMRRKFKQQQKKQAKDVNWRDMYDDK 908
BLAST of mRNA_S-firma_M_contig8943.19846.1 vs. uniprot
Match: A0A835ZHL5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHL5_9STRA) HSP 1 Score: 145 bits (367), Expect = 2.790e-37 Identity = 73/117 (62.39%), Postives = 91/117 (77.78%), Query Frame = 1
Query: 139 VVAWTDRVD---------SVDVSFLNRWRGGPGTGEYILYVRAVDAAGNADFSFRDTLNMYTWTYVSPLPWGIIVPLFFGSVILLIVLYIEYRRRKKKRAMERYALKRMRRKFKQQQ 462
V+AWT D S DV +L+RW GGPGTG YILYVRAVD AGN DFS+R+ LNM+TW Y+SPLPWG+I+ + F +++LL +LY+EYRRR+K+ AM RYA+KRMRRKFKQQQ
Sbjct: 1249 VLAWTPMPDXXXXXXXXXSYDVGWLSRWEGGPGTGMYILYVRAVDPAGNTDFSYREGLNMHTWQYISPLPWGMILGVGFAALVLLALLYVEYRRRRKRSAMRRYAMKRMRRKFKQQQ 1365
BLAST of mRNA_S-firma_M_contig8943.19846.1 vs. uniprot
Match: A0A7S4QHJ4_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QHJ4_9STRA) HSP 1 Score: 137 bits (345), Expect = 2.480e-34 Identity = 77/170 (45.29%), Postives = 102/170 (60.00%), Query Frame = 1
Query: 1 RDDRTPTAFVANGPSSYTSGSDFDFTCDEEACY-YEIRVFDADESLEVVAW--TDRVDSVDVSFLNRWRGGPGTGEYILYVRAVDAAGNADFSFRDTLNMYTWTYVSPLPWGIIVPLFFGSVILLIVLYIEYRRRKKKRAMERYALKRMRRKFKQQQKNQAKDVNWRDMY 501
RDD P A + P S T S F F +E + + +E +V D E +V W T DVS+L+ +GGPG G YI+YVRA+D +GN DF + N+Y W YV PLPWG+I V L +VL+ EYRRRK+K A+ERYA++RMRRKFK ++ +WRD Y
Sbjct: 912 RDDSFPHAVIETKPLSRTPESSFLFVSNEASAHLFEYKVVDVTERSDVTPWILTTAERGADVSWLDDKKGGPGRGWYIMYVRAIDPSGNKDFQYSSETNVYLWYYVPPLPWGLITGYISSFVFLSLVLFFEYRRRKRKAALERYAIRRMRRKFKLHAMSEGGKTDWRDYY 1081
BLAST of mRNA_S-firma_M_contig8943.19846.1 vs. uniprot
Match: A0A7S2G584_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G584_9STRA) HSP 1 Score: 121 bits (303), Expect = 3.130e-29 Identity = 84/199 (42.21%), Postives = 107/199 (53.77%), Query Frame = 1
Query: 1 RDDRTPTAFVANGPSSYTSGSDFDFTCDEEACYYEIRVFDADESLEVVAWTDRVDSVDVSFLNRW-RGGPG-----------------------TGEYILYVRAVDAAGNADFSFRDTL--NMYTWTYVSPLPWGIIVPLFFGSVILLIVLYIEYRRRKKKRAMERYALKRMRRKFKQQQKNQAKD----VNWRDMYDD 507
RDDR P+ + P T+ DE+ C E R++D E+LEV W + V + +L+ W GGPG TG+Y YVR+VD AGN D ++ DT NMY W YV PLP +IV GSV L LY+E RRRK+K AM+RYA+KRMRRKFK QK+ KD V+W+ M DD
Sbjct: 258 RDDRLPSTMITRAPKHRTAEYKIRTVVDEDGCQQEYRMWDRAENLEVRRWNRFFNKVHIDWLDYWYSGGPGGEDECPIWERIKGPYGADRCSYRTGKYTFYVRSVDPAGNPDPTY-DTYRANMYRWDYVQPLPTHLIVGGCLGSVFLAWCLYMEVRRRKRKAAMQRYAIKRMRRKFKASQKD-GKDAKGGVDWKSMMDD 454
BLAST of mRNA_S-firma_M_contig8943.19846.1 vs. uniprot
Match: A0A7S3K0V2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K0V2_9STRA) HSP 1 Score: 119 bits (299), Expect = 9.200e-29 Identity = 79/186 (42.47%), Postives = 106/186 (56.99%), Query Frame = 1
Query: 1 RDDRTPTAFVANGPSSYTSGSD---------FDFTC--DEEACYYEIRVFDADESLEVVAWTDRVDSVDVSFLNRW-RGGPGTGEYILYVRAVDAAGNADFSFRDTLNMYTWTYVSPLPWGIIVPLFFGSVILLIVLYIEYRRRKKKRAMERYALKRMRRKFKQQQKNQAKD--VNWRDMYD-DKK 513
RDD P A + N P + G + F F D+E E ++DADE V W V V +L+ W + GPG+G YI YVR++D AGN D SF NMY W YV+ LPW II G + L +++Y+E +RRK+K AMERYA+KRMRRKFK Q+ A V+W+++ + DKK
Sbjct: 194 RDDYLPRARIINKPETLNFGENPFNIFGEAQFKFVARPDKEGTILEHLLYDADEHAIVRTWDRTKSKVSVKWLDYWYKDGPGSGNYIFYVRSLDPAGNIDVSFSK-YNMYKWKYVTALPWHIIGGTICGFIALCVIIYLEKKRRKRKAAMERYAIKRMRRKFKGAQREHAAKGAVDWKEIMEKDKK 378
BLAST of mRNA_S-firma_M_contig8943.19846.1 vs. uniprot
Match: A0A067D437_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D437_SAPPC) HSP 1 Score: 121 bits (303), Expect = 1.130e-28 Identity = 73/171 (42.69%), Postives = 100/171 (58.48%), Query Frame = 1
Query: 1 RDDRTPTAFVANGPSSYTSGSDFDFTCDEEACYYEIRVFDADESLEVVAWTDRVDSVDVSFLNRWRGGPGTGEYILYVRAVDAAGNADFSFRDTLNMYTWTYVSPLPWGIIVPLFFGSVILLIVLYIEYRRRKKKRAMERYALKRMRRKFKQQQKNQAKDVNWRDMYDDKK 513
RD PT+F P S TS + F F + ++ V D E L V WTD + +DV+ W G G + + +RA+DAAGN + F N+Y WTYV LPW +I+ + V+LL L++E+RRR+K+ AMERYA+KRMRRK + +K KDVNWR YD+ K
Sbjct: 693 RDPTLPTSFFTLTPESSTSQTIFQFRSAKAGTIFQYHVIDLVEMLVVRNWTDCLGEIDVA---SWLDG---GYHRIRLRAIDAAGNVESRFEAGRNLYDWTYVPALPWNLIIGMIALCVVLLAGLFLEWRRRRKQAAMERYAMKRMRRKMRGDKKGGNKDVNWRATYDEAK 857
BLAST of mRNA_S-firma_M_contig8943.19846.1 vs. uniprot
Match: B8BYJ1_THAPS (Phosphodiesterase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYJ1_THAPS) HSP 1 Score: 117 bits (292), Expect = 3.360e-27 Identity = 66/155 (42.58%), Postives = 94/155 (60.65%), Query Frame = 1
Query: 1 RDDRTPTAFVANGPSSYTSGSDFDFTCDEEACY-YEIRVFDADESLEVVAWTDRVDSVDVSFLNRWRGGPGTGEYILYVRAVDAAGNADFSFRDTLNMYTWTYVSPLPWGIIVPLFFGSVILLIVLYIEYRRRKKKRAMERYALKRMRRKFKQQQ 462
RD+ P A + P SYT S F F +E + +E ++ D L T + VDVS+L+ +GGPG G Y LYVRA+D +GN D +F N+Y W YV P+PWG + F S++L+ Y EYRRRK++ ++R+AL+R+RRKFK +Q
Sbjct: 1378 RDEVFPRAIITAMPESYTPQSIFFFDSNEAGAHVFEYKLLREDNDLTPWTTTTKSIGVDVSWLDDKKGGPGQGWYTLYVRAIDPSGNRDVTFSTQANVYKWYYVPPVPWGAVAGGVFTSLVLIFGGYYEYRRRKRRATLQRFALRRLRRKFKLKQ 1532
BLAST of mRNA_S-firma_M_contig8943.19846.1 vs. uniprot
Match: A0A662XZ76_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XZ76_9STRA) HSP 1 Score: 116 bits (291), Expect = 4.380e-27 Identity = 75/179 (41.90%), Postives = 106/179 (59.22%), Query Frame = 1
Query: 1 RDDRTPTAFVANGPSSYTSGSDFDFTCDEEACYYEIRVFDADESLEVVAWTDRVDSVDV-SFLNRWRGGPGTGEYILYVRAVDAAGNADFSFRDTLNMYTWTYVSPLPWGIIVPLFFGSVILLIVLYIEYRRRKKKRAMERYALKRMRRKFKQQQKNQAK-------DVNWRDMYDDKK 513
RD R P A P+S +S + F F D+ AC +E V D E L V WT + +DV S+L+ +G + L +RA D AGN D SF D N +TW YV PLPWG+I+ L + + L+ ++E+R+R+K+ AMERYA+KRMRRK +++++ K D NWR+ YDD K
Sbjct: 693 RDARRPLAQFTLVPASGSSDTVFRFESDKSACLFEYYVLDTVEQLVVRNWTLTLGELDVESWLD-------SGTFRLRIRARDPAGNVDESFEDGRNEHTWEYVPPLPWGLIIGLSSVAFVGLVGFFMEWRKRRKRAAMERYAMKRMRRKLRKKEEVGGKKKGGKEGDANWRETYDDAK 864
BLAST of mRNA_S-firma_M_contig8943.19846.1 vs. uniprot
Match: A0A2R5GSG2_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GSG2_9STRA) HSP 1 Score: 115 bits (288), Expect = 1.090e-26 Identity = 69/157 (43.95%), Postives = 94/157 (59.87%), Query Frame = 1
Query: 1 RDDRTPTAFVANGPSSYTSGSDFDFTCDEEACYYE--IRVFDADESLEVVAWTDRVDSVDVSFLNRWRGGPGTGEYILYVRAVDAAGNADFSFRDTLNMYTWTYVSPLPWGIIVPLFFGSVILLIVLYIEYRRRKKKRAMERYALKRMRRKFKQQQK 465
RDD P ++ P TS ++F+F+CDE C +E + V D+S V D + S +F + PG G Y + VRA+D AGN D + + N YTWTYV +P G+I+ + F +L + +Y+E RRRKKK A+ERYALKRMRRKFK QK
Sbjct: 638 RDDTVPLTLMSTKPEDSTSDTEFEFSCDENDCLFEYKVEVMADDDSSVVEMLQDWIMSTGATF-DLLELFPGGGRYRMTVRAIDPAGNVDVVYAEGRNQYTWTYVPKVPVGLIMGILFIFALLGLAVYLEMRRRKKKAALERYALKRMRRKFKGMQK 793
BLAST of mRNA_S-firma_M_contig8943.19846.1 vs. uniprot
Match: A0A7S2CZB1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CZB1_9STRA) HSP 1 Score: 112 bits (280), Expect = 1.240e-26 Identity = 69/170 (40.59%), Postives = 99/170 (58.24%), Query Frame = 1
Query: 1 RDDRTPTAFVANGPSSYTSGSDFDFTCDEEACYYEIRVFDADESLEVVAWTDRVDSVDVSFLNRW-RGGPGTGEYILYVRAVDAAGNADFSFR--DTLNMYTWTYVSPLPWGIIVPLFFGSVILLIVLYIEYRRRKKKRAMERYALKRMRRKFKQQQKNQAKD-VNWRDM 498
RDDR P + P T F + D++ C +E R++D E+LEV W ++V +L+ W +GGPG G Y Y R+VD AGN D +F+ T NM+ W + + P +IV G + LL + Y+E RRR++K AM+RYA+KRMRRKFK Q + +WRD+
Sbjct: 169 RDDRLPKTTITKAPQDLTPEHIFKVSSDKDGCQHEYRMWDRTENLEVRRWNRFTRKINVVWLDYWLKGGPGEGYYTFYARSVDPAGNVDPTFKLFYTKNMHHWHFKNSDPVDLIVGCVMGFLFLLFLGYMERRRRRRKAAMKRYAIKRMRRKFKAAQAGKHDGGPDWRDV 338 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig8943.19846.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig8943.19846.1 >prot_S-firma_M_contig8943.19846.1 ID=prot_S-firma_M_contig8943.19846.1|Name=mRNA_S-firma_M_contig8943.19846.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=171bp RDDRTPTAFVANGPSSYTSGSDFDFTCDEEACYYEIRVFDADESLEVVAWback to top mRNA from alignment at S-firma_M_contig8943:930..3739+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig8943.19846.1 ID=mRNA_S-firma_M_contig8943.19846.1|Name=mRNA_S-firma_M_contig8943.19846.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=2810bp|location=Sequence derived from alignment at S-firma_M_contig8943:930..3739+ (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig8943:930..3739+ >mRNA_S-firma_M_contig8943.19846.1 ID=mRNA_S-firma_M_contig8943.19846.1|Name=mRNA_S-firma_M_contig8943.19846.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=1026bp|location=Sequence derived from alignment at S-firma_M_contig8943:930..3739+ (Sphaerotrichia firma Sfir_13m male)back to top |