prot_S-firma_F_contig11126.1492.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig11126.1492.1
Unique Nameprot_S-firma_F_contig11126.1492.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length200
Homology
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BLAST of mRNA_S-firma_F_contig11126.1492.1 vs. uniprot
Match: A0A6H5K3N3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3N3_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 1.450e-55
Identity = 97/139 (69.78%), Postives = 108/139 (77.70%), Query Frame = 0 
Query:   59 MGTSSQHGLHVGGTTVSSPYAQSTNRPPKFRVRVYNDRLFQSLLEDGGKSSTSPRSFGRSVKSRPLHPPQENRCEAMLKAGAFAKKKRREKQYMLQLTQQQLLXXXXXXXRLLETAASKEREFVRLSGEVVEGKVYVAD 197
            MG S+ HGL  GGT   SPYAQ +NRPP FRVRVYND LF+SLL+DG  SSTSPRS GRS KSRP  PPQE+R EAMLKAGA AKKKRREKQY+ QLTQQQLL       +LLE AASKEREFVRLSGE+  G+ +V +
Sbjct:    1 MGASNHHGLGSGGTNACSPYAQPSNRPPAFRVRVYNDGLFKSLLDDGRTSSTSPRSLGRSAKSRPSRPPQEDRSEAMLKAGALAKKKRREKQYLFQLTQQQLLQDRLVRDKLLEAAASKEREFVRLSGEIEAGRTFVKE 139
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BLAST of mRNA_S-firma_F_contig11126.1492.1 vs. uniprot
Match: D8LIN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIN6_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 1.010e-15
Identity = 45/63 (71.43%), Postives = 50/63 (79.37%), Query Frame = 0 
Query:  135 MLKAGAFAKKKRREKQYMLQLTQQQLLXXXXXXXRLLETAASKEREFVRLSGEVVEGKVYVAD 197
            MLKAGA AKKKRREKQY+LQLTQQQLL       +LLE AASKEREFVRLSGEV  G+ +V +
Sbjct:    1 MLKAGALAKKKRREKQYLLQLTQQQLLQDRLVRDKLLEAAASKEREFVRLSGEVEAGRTFVKE 63
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig11126.1492.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K3N3_9PHAE1.450e-5569.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIN6_ECTSI1.010e-1571.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig11126contigS-firma_F_contig11126:3692..4735 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig11126.1492.1mRNA_S-firma_F_contig11126.1492.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig11126 3692..4735 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig11126.1492.1 ID=prot_S-firma_F_contig11126.1492.1|Name=mRNA_S-firma_F_contig11126.1492.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=200bp
PATYTPPVSALPGGLEGVQRDGCGRTAACGPGATSLCFSACSLPVPGTRR
CADYRTCGMGTSSQHGLHVGGTTVSSPYAQSTNRPPKFRVRVYNDRLFQS
LLEDGGKSSTSPRSFGRSVKSRPLHPPQENRCEAMLKAGAFAKKKRREKQ
YMLQLTQQQLLQDRLVSDRLLETAASKEREFVRLSGEVVEGKVYVADTV*
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