prot_S-firma_F_contig11095.1450.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig11095.1450.1
Unique Nameprot_S-firma_F_contig11095.1450.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length243
Homology
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BLAST of mRNA_S-firma_F_contig11095.1450.1 vs. uniprot
Match: A0A6H5JAD8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAD8_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 5.610e-73
Identity = 107/133 (80.45%), Postives = 119/133 (89.47%), Query Frame = 0 
Query:  107 FAAAFAKVEQALGLSPLDHAEAMGLDVWEVGGSSGTIAGFQGKKVDWVSRCTFQEADGSSRECLRAWVMPMFDVPHLSISIGSGPNGLTAEMDLISKDDLMYAKAYREQYYGGRTSAWWSALVQNVQAAPTKV 239
            FAAAF+ VEQAL LSPLDHAEAMGL+ WE  GSSGTIAGF+GKKVDWVSRCT  EADGS+RECLRAWVMPMFDVPHLSI++GSGPNGLTAEMDL++KDD+MYAKAYREQYYGG T+AWW A++QN    P KV
Sbjct:   16 FAAAFSMVEQALELSPLDHAEAMGLETWEAAGSSGTIAGFKGKKVDWVSRCTINEADGSTRECLRAWVMPMFDVPHLSITLGSGPNGLTAEMDLVAKDDVMYAKAYREQYYGGPTTAWWEAIMQNPNVVPAKV 148
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BLAST of mRNA_S-firma_F_contig11095.1450.1 vs. uniprot
Match: D8LIG6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIG6_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 1.760e-69
Identity = 103/132 (78.03%), Postives = 116/132 (87.88%), Query Frame = 0 
Query:  107 FAAAFAKVEQALGLSPLDHAEAMGLDVWEVGGSSGTIAGFQGKKVDWVSRCTFQEADGSSRECLRAWVMPMFDVPHLSISIGSGPNGLTAEMDLISKDDLMYAKAYREQYYGGRTSAWWSALVQNVQAAPTK 238
            FAAAF+ VEQAL LSPLDHAEAMGL+ WE  GSSGTIAGF+G+KVDWVS CT  E DGS+RECLRAWVMPMFDVPHLSI++GSGPNGLTAEMDL++KDD+MYAKAYREQYYGG T+AWW A++QN    P K
Sbjct:  159 FAAAFSMVEQALELSPLDHAEAMGLETWEAAGSSGTIAGFKGRKVDWVSHCTINEPDGSTRECLRAWVMPMFDVPHLSITLGSGPNGLTAEMDLVAKDDVMYAKAYREQYYGGPTTAWWDAIMQNPNVVPAK 290
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig11095.1450.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JAD8_9PHAE5.610e-7380.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIG6_ECTSI1.760e-6978.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.1500.20coord: 108..242
e-value: 1.2E-12
score: 49.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig11095contigS-firma_F_contig11095:598..4551 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig11095.1450.1mRNA_S-firma_F_contig11095.1450.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig11095 598..4551 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig11095.1450.1 ID=prot_S-firma_F_contig11095.1450.1|Name=mRNA_S-firma_F_contig11095.1450.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=243bp
PPGAFVSDPRAPPGAKISDPRAPPGATVSDPRAPPGARVSDPRAPPAGGG
GVSAPGGVSAPGGVSAPAGVSDPRAVAAAAPAYAPPPPQVGGGGGGGASS
GEAGAGFAAAFAKVEQALGLSPLDHAEAMGLDVWEVGGSSGTIAGFQGKK
VDWVSRCTFQEADGSSRECLRAWVMPMFDVPHLSISIGSGPNGLTAEMDL
ISKDDLMYAKAYREQYYGGRTSAWWSALVQNVQAAPTKVRNA*
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