prot_S-firma_F_contig11024.1375.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig11024.1375.1
Unique Nameprot_S-firma_F_contig11024.1375.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length118
Homology
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BLAST of mRNA_S-firma_F_contig11024.1375.1 vs. uniprot
Match: A0A6H5LMQ8_9PHAE (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LMQ8_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 1.650e-44
Identity = 87/130 (66.92%), Postives = 93/130 (71.54%), Query Frame = 0 
Query:    1 MRDFAGKSNHLLAKEVLAEIPAQVIEYMKNNKIVPGNPHRPRMPGRQGSIGSMALQESFMHNGPAPM---------------GTGPSFRRAPQHQPSHQQGSFMHPQPGAPTAPYAPPQRNGGDPPPTYS 115
            MRDFAGKS+H LAKEVLAEIPAQVIEYMKNN I PGNPHRP + G QGS+GSMAL+ESFMHNG AP+                  PSFR  PQ     QQGSFMHPQ GAPTAPY PPQ+ GGD PP YS
Sbjct:  527 MRDFAGKSSHALAKEVLAEIPAQVIEYMKNNHIPPGNPHRPSLAGCQGSMGSMALKESFMHNGAAPVPGMPQGGSFTNHQAPSAAPSFRGQPQQYNQSQQGSFMHPQAGAPTAPYEPPQQTGGDAPPVYS 656
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BLAST of mRNA_S-firma_F_contig11024.1375.1 vs. uniprot
Match: A0A6H5L3T5_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3T5_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 1.320e-29
Identity = 60/77 (77.92%), Postives = 66/77 (85.71%), Query Frame = 0 
Query:    1 MRDFAGKSNHLLAKEVLAEIPAQVIEYMKNNKIVPGNPHRPRMPGRQGSIGSMALQESFMHNGPAPMGTGPSFRRAP 77
            MRDFAGKS+H LAKEVLAEIPAQVIEYM+NN+I PGNPHRPR  G QGSIGSMAL+ SFMHNG AP+  GP+  RAP
Sbjct:  532 MRDFAGKSSHALAKEVLAEIPAQVIEYMENNQIPPGNPHRPRTGGGQGSIGSMALKGSFMHNGAAPVAGGPASHRAP 608
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BLAST of mRNA_S-firma_F_contig11024.1375.1 vs. uniprot
Match: D7FXN1_ECTSI (Copine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN1_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 1.950e-25
Identity = 54/67 (80.60%), Postives = 59/67 (88.06%), Query Frame = 0 
Query:    1 MRDFAGKSNHLLAKEVLAEIPAQVIEYMKNNKIVPGNPHRPRMPGRQGSIGSMALQESFMHNGPAPM 67
            MRDFAGKS+H LAKEVLAEIPAQVIEYM+NN+I PGNPHRPR  G QGSIGSMAL+ SFM NG AP+
Sbjct:  478 MRDFAGKSSHALAKEVLAEIPAQVIEYMENNQIPPGNPHRPRTNGGQGSIGSMALKGSFMQNGAAPV 544
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig11024.1375.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5LMQ8_9PHAE1.650e-4466.92C2 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A6H5L3T5_9PHAE1.320e-2977.92C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7FXN1_ECTSI1.950e-2580.60Copine n=1 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig11024contigS-firma_F_contig11024:2424..4869 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig11024.1375.1mRNA_S-firma_F_contig11024.1375.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig11024 2196..4892 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig11024.1375.1 ID=prot_S-firma_F_contig11024.1375.1|Name=mRNA_S-firma_F_contig11024.1375.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=118bp
MRDFAGKSNHLLAKEVLAEIPAQVIEYMKNNKIVPGNPHRPRMPGRQGSI
GSMALQESFMHNGPAPMGTGPSFRRAPQHQPSHQQGSFMHPQPGAPTAPY
APPQRNGGDPPPTYSYT*
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