prot_S-firma_F_contig1102.1368.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1102.1368.1
Unique Nameprot_S-firma_F_contig1102.1368.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length776
Homology
BLAST of mRNA_S-firma_F_contig1102.1368.1 vs. uniprot
Match: A0A6H5L3H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H2_9PHAE)

HSP 1 Score: 329 bits (843), Expect = 3.340e-97
Identity = 279/584 (47.77%), Postives = 308/584 (52.74%), Query Frame = 0
Query:  259 DKLPPCPYPGHKNISWTCHGCGGAKHHLTSRFAMEPLQRAHGFKVQRVPNDGDCFFSSIKAALPD-----GAAAGTEAARAGRALTVAEMREWVAEETGEEQLEFYILQAGAHPEDRWLDFVRPLDKRIPSDDEXXXXXXXXXXXSYKDDAESAASLSQSQSXXXXXXXXXXXXXXXXGSRRPSRAAKARGR------------------KMENDAPNADGGSEGGKGKGRRGKRGGGGEDAETSTCTGDEAATATEGGVDDNGDVTVTAVST--SPTSDRHARRLRRRCSGGGRLSTAAESPAAGRDASKNEKDAKPSSSLPATAAAAALGSPSRKSARLGRGRQTEGEWRVGADS----------------------------------------------------------GGGEXXXXXXXXXXXXXXXXEDEKNEGLPFVQTVEDLRRFVRLEGSVVGHGNCMWADTFAHHVVSRRLKITILFVDMEREKSAWPYRVLARTMTEHDNEEDERFVVLKREPSHFVLLKTAPSPDEKSGAXXXXXXXXXXXXT---KRRGGQACFSRSDLPDVVRRLWQI 756
            ++LPPCPYPGH+N+SWTC  CGGAKHHLTSR AMEPLQRAHGFKV RVPNDGDCFFSSIKAALP      G   G  AA AG ALTV +MREWVAEE G++QL+FYILQAGA+PEDRWLDFVRPL  RIPSDDEXXXXXXXXXXX                 XXXXXXXXXXXXXXXX                                +  +D P      EG K   RR  +    +  E S CT                  T+ AV +  S +SDR+AR LRRR   G  LS                                                                                                                      GGG                  +E+NEGLP V+TVE+LRRFVRLEGS VGHGNCMWADT AHHVVSRRLKITILFVDMEREK AWPYRVLART+T+ D+EEDERFVVLKREPSHFVLL+T PSP++  GA   XXXXXXXXX    K   GQACFSRS+LPDVVRRLWQ+
Sbjct:  252 EQLPPCPYPGHQNVSWTCRACGGAKHHLTSRSAMEPLQRAHGFKVHRVPNDGDCFFSSIKAALPAAELARGDEGGGAAAGAGSALTVRQMREWVAEEMGQDQLDFYILQAGANPEDRWLDFVRPLVDRIPSDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTGSDQP------EGKKSTSRRSAKADDIDAPEDSGCT------------------TLAAVVSPRSSSSDRNARYLRRREGRG--LSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGRERTEAVGWRWENEV---EEQNEGLPVVETVEELRRFVRLEGSDVGHGNCMWADTHAHHVVSRRLKITILFVDMEREKRAWPYRVLARTVTDSDDEEDERFVVLKREPSHFVLLETVPSPEDSDGAVSSXXXXXXXXXXXXXKGGRGQACFSRSELPDVVRRLWQL 806          
BLAST of mRNA_S-firma_F_contig1102.1368.1 vs. uniprot
Match: D8LS81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS81_ECTSI)

HSP 1 Score: 295 bits (755), Expect = 6.660e-88
Identity = 272/508 (53.54%), Postives = 300/508 (59.06%), Query Frame = 0
Query:  292 MEPLQRAHGFKVQRVPNDGDCFFSSIKAALPDGAAAGTEAAR----------AGRALTVAEMREWVAEETGEEQLEFYILQAGAHPEDRWLDFVRPLDKRIPSDDEXXXXXXXXXXX-----SYKDDAESAASLSQSQSXXXXXXXXXXXXXXXXGSRRPSRAAKARGRKMENDAP-----------NADGGSEGGKGKGRRGKRGGGGEDAETSTCTGDEAATATEGGVDDNGDVTVTAVSTSPT--SDRHARRLRRRCSGGGRLSTAAESPAAGRDASKNEKDAKPSSSLPATAAAAALGSPSRKSARLGRGRQTEGEWRVGADSGGGEXXXXXXXXXXXXXXXXE------------DEKNEGLPFVQTVEDLRRFVRLEGSVVGHGNCMWADTFAHHVVSRRLKITILFVDMEREKSAWPYRVLARTMTEHDNEEDERFVVLKREPSHFVLLKTAPSPDEKSGAXXXXXXXXXXXXT---KRRGGQACFSRSDLPDVVRRLWQI 756
            MEPLQRAHGFKV RVPNDGDCFFSSIKAALPDG AA  E AR          AG ALTV +MREWVAEE G++QL+FYILQAGA+PEDRWLDFVRPL  RIPSDDEXXXXXXXXXXX     SY+ + E          XXXXXXXXXXXXXXXX                                   G  EG K   RR  +    +  E S C                   T+ AV + P+  SDR+AR LRRR   G                                                 +G+ T    RVG + G G XXXXXXXXXXXXXXXXE            +E+NEGLP V+TVE+LRRFVRLEGS VGHGNCMWADT AHHVVSRRLKITILFVDMEREK AWPYRVLART+T+ D+ EDERFVVLKREPSHFVLL+T PSP++  GA      XXXXXX    K   GQACFSRS+LPDVVRRLWQ+
Sbjct:    1 MEPLQRAHGFKVHRVPNDGDCFFSSIKAALPDGVAA--ERARGGXXXXAADCAGSALTVRQMREWVAEEMGQDQLDFYILQAGANPEDRWLDFVRPLVDRIPSDDEXXXXXXXXXXXXXXXXSYRGETEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSGQPEGKKPTSRRTAKADDTDAPEDSECA------------------TLAAVVSPPSASSDRNARYLRRREGRGLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKATSPR-RVG-EEGSGXXXXXXXXXXXXXXXXXETEAVGWRWENEVEEENEGLPVVETVEELRRFVRLEGSDVGHGNCMWADTHAHHVVSRRLKITILFVDMEREKRAWPYRVLARTVTDSDDGEDERFVVLKREPSHFVLLETVPSPEDSDGAVGSDSGXXXXXXXXXXKGGRGQACFSRSELPDVVRRLWQL 486          
BLAST of mRNA_S-firma_F_contig1102.1368.1 vs. uniprot
Match: A0A836CA53_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA53_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.040e-20
Identity = 54/112 (48.21%), Postives = 67/112 (59.82%), Query Frame = 0
Query:  265 PYPGHKNISWTCHGCGGAKHHLTSRFAMEPLQRAHGFKVQRVPNDGDCFFSSIKAALPDGAAAGTEAARAGRALTVAEMREWVAEETGEEQLEFYILQAGAHPEDRWLDFVR 376
            PYP H ++ W C  C   +H LTS+ A+ P ++AHGFKV  VP DGDCF+SS+  AL          A  G   TVA++REWVA    EE L FY + A A+P   WLDFVR
Sbjct:   47 PYPCHTDVVWMCEACA-VEHCLTSKQALAPFRKAHGFKVYAVPKDGDCFYSSVCMAL----------ASVGVRATVAQLREWVAASMTEEHLRFYQVHAEANPSASWLDFVR 147          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1102.1368.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L3H2_9PHAE3.340e-9747.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS81_ECTSI6.660e-8853.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CA53_9STRA1.040e-2048.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1102contigS-firma_F_contig1102:14969..19138 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1102.1368.1mRNA_S-firma_F_contig1102.1368.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1102 14867..19954 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1102.1368.1 ID=prot_S-firma_F_contig1102.1368.1|Name=mRNA_S-firma_F_contig1102.1368.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=776bp
MLKSQAPSRQKLKGRLPSNKRQKTTTAAPAGAAAGGGGVLGTATPATTGR
SPPVATSFTASIDHPEAGRSLSPRGGQDPRFQIVPHNVAAAAAGADRCAK
SATRTMAAMNGSSAPNSAAALGPVRRVKVRRPEASAEFDWRVQSASATPR
RRDQRAVSPSSTRASGRGRSEASAEAATAGRSPAKRSNSSRSSSGGAQSS
STGAGTSNSGIKCSNLGSSRSPRKKHAAATATAAATSTTTKKKREEEKGE
GEGEEDEEDKLPPCPYPGHKNISWTCHGCGGAKHHLTSRFAMEPLQRAHG
FKVQRVPNDGDCFFSSIKAALPDGAAAGTEAARAGRALTVAEMREWVAEE
TGEEQLEFYILQAGAHPEDRWLDFVRPLDKRIPSDDEEEEDDDDKDDDSY
KDDAESAASLSQSQSQRSQPKSRTSPRKSPSGSRRPSRAAKARGRKMEND
APNADGGSEGGKGKGRRGKRGGGGEDAETSTCTGDEAATATEGGVDDNGD
VTVTAVSTSPTSDRHARRLRRRCSGGGRLSTAAESPAAGRDASKNEKDAK
PSSSLPATAAAAALGSPSRKSARLGRGRQTEGEWRVGADSGGGEGGGTGG
TENGEKGNKGEDEKNEGLPFVQTVEDLRRFVRLEGSVVGHGNCMWADTFA
HHVVSRRLKITILFVDMEREKSAWPYRVLARTMTEHDNEEDERFVVLKRE
PSHFVLLKTAPSPDEKSGAGAGASGGGAATATKRRGGQACFSRSDLPDVV
RRLWQIEPKVKSPASRAAGDGGRRA*
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