mRNA_S-firma_F_contig1102.1368.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_S-firma_F_contig1102.1368.1
Unique Name	mRNA_S-firma_F_contig1102.1368.1
Type	mRNA
Organism	Sphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)

Homology

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BLAST of mRNA_S-firma_F_contig1102.1368.1 vs. uniprot
Match: A0A6H5L3H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H2_9PHAE)

HSP 1 Score: 329 bits (843), Expect = 1.470e-94
Identity = 279/584 (47.77%), Postives = 308/584 (52.74%), Query Frame = 1

Query:  877 DKLPPCPYPGHKNISWTCHGCGGAKHHLTSRFAMEPLQRAHGFKVQRVPNDGDCFFSSIKAALPD-----GAAAGTEAARAGRALTVAEMREWVAEETGEEQLEFYILQAGAHPEDRWLDFVRPLDKRIPSDDEXXXXXXXXXXXSYKDDAESAASLSQSQSXXXXXXXXXXXXXXXXGSRRPSRAAKARGR------------------KMENDAPNADGGSEGGKGKGRRGKRGGGGEDAETSTCTGDEAATATEGGVDDNGDVTVTAVST--SPTSDRHARRLRRRCSGGGRLSTAAESPAAGRDASKNEKDAKPSSSLPATAAAAALGSPSRKSARLGRGRQTEGEWRVGADS----------------------------------------------------------GGGEXXXXXXXXXXXXXXXXEDEKNEGLPFVQTVEDLRRFVRLEGSVVGHGNCMWADTFAHHVVSRRLKITILFVDMEREKSAWPYRVLARTMTEHDNEEDERFVVLKREPSHFVLLKTAPSPDEKSGAXXXXXXXXXXXXT---KRRGGQACFSRSDLPDVVRRLWQI 2370
            ++LPPCPYPGH+N+SWTC  CGGAKHHLTSR AMEPLQRAHGFKV RVPNDGDCFFSSIKAALP      G   G  AA AG ALTV +MREWVAEE G++QL+FYILQAGA+PEDRWLDFVRPL  RIPSDDEXXXXXXXXXXX                 XXXXXXXXXXXXXXXX                                +  +D P      EG K   RR  +    +  E S CT                  T+ AV +  S +SDR+AR LRRR   G  LS                                                                                                                      GGG                  +E+NEGLP V+TVE+LRRFVRLEGS VGHGNCMWADT AHHVVSRRLKITILFVDMEREK AWPYRVLART+T+ D+EEDERFVVLKREPSHFVLL+T PSP++  GA   XXXXXXXXX    K   GQACFSRS+LPDVVRRLWQ+
Sbjct:  252 EQLPPCPYPGHQNVSWTCRACGGAKHHLTSRSAMEPLQRAHGFKVHRVPNDGDCFFSSIKAALPAAELARGDEGGGAAAGAGSALTVRQMREWVAEEMGQDQLDFYILQAGANPEDRWLDFVRPLVDRIPSDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTGSDQP------EGKKSTSRRSAKADDIDAPEDSGCT------------------TLAAVVSPRSSSSDRNARYLRRREGRG--LSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGRERTEAVGWRWENEV---EEQNEGLPVVETVEELRRFVRLEGSDVGHGNCMWADTHAHHVVSRRLKITILFVDMEREKRAWPYRVLARTVTDSDDEEDERFVVLKREPSHFVLLETVPSPEDSDGAVSSXXXXXXXXXXXXXKGGRGQACFSRSELPDVVRRLWQL 806

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BLAST of mRNA_S-firma_F_contig1102.1368.1 vs. uniprot
Match: D8LS81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS81_ECTSI)

HSP 1 Score: 295 bits (755), Expect = 1.270e-85
Identity = 272/508 (53.54%), Postives = 300/508 (59.06%), Query Frame = 1

Query:  976 MEPLQRAHGFKVQRVPNDGDCFFSSIKAALPDGAAAGTEAAR----------AGRALTVAEMREWVAEETGEEQLEFYILQAGAHPEDRWLDFVRPLDKRIPSDDEXXXXXXXXXXX-----SYKDDAESAASLSQSQSXXXXXXXXXXXXXXXXGSRRPSRAAKARGRKMENDAP-----------NADGGSEGGKGKGRRGKRGGGGEDAETSTCTGDEAATATEGGVDDNGDVTVTAVSTSPT--SDRHARRLRRRCSGGGRLSTAAESPAAGRDASKNEKDAKPSSSLPATAAAAALGSPSRKSARLGRGRQTEGEWRVGADSGGGEXXXXXXXXXXXXXXXXE------------DEKNEGLPFVQTVEDLRRFVRLEGSVVGHGNCMWADTFAHHVVSRRLKITILFVDMEREKSAWPYRVLARTMTEHDNEEDERFVVLKREPSHFVLLKTAPSPDEKSGAXXXXXXXXXXXXT---KRRGGQACFSRSDLPDVVRRLWQI 2370
            MEPLQRAHGFKV RVPNDGDCFFSSIKAALPDG AA  E AR          AG ALTV +MREWVAEE G++QL+FYILQAGA+PEDRWLDFVRPL  RIPSDDEXXXXXXXXXXX     SY+ + E          XXXXXXXXXXXXXXXX                                   G  EG K   RR  +    +  E S C                   T+ AV + P+  SDR+AR LRRR   G                                                 +G+ T    RVG + G G XXXXXXXXXXXXXXXXE            +E+NEGLP V+TVE+LRRFVRLEGS VGHGNCMWADT AHHVVSRRLKITILFVDMEREK AWPYRVLART+T+ D+ EDERFVVLKREPSHFVLL+T PSP++  GA      XXXXXX    K   GQACFSRS+LPDVVRRLWQ+
Sbjct:    1 MEPLQRAHGFKVHRVPNDGDCFFSSIKAALPDGVAA--ERARGGXXXXAADCAGSALTVRQMREWVAEEMGQDQLDFYILQAGANPEDRWLDFVRPLVDRIPSDDEXXXXXXXXXXXXXXXXSYRGETEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSGQPEGKKPTSRRTAKADDTDAPEDSECA------------------TLAAVVSPPSASSDRNARYLRRREGRGLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKATSPR-RVG-EEGSGXXXXXXXXXXXXXXXXXETEAVGWRWENEVEEENEGLPVVETVEELRRFVRLEGSDVGHGNCMWADTHAHHVVSRRLKITILFVDMEREKRAWPYRVLARTVTDSDDGEDERFVVLKREPSHFVLLETVPSPEDSDGAVGSDSGXXXXXXXXXXKGGRGQACFSRSELPDVVRRLWQL 486

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BLAST of mRNA_S-firma_F_contig1102.1368.1 vs. uniprot
Match: A0A836CA53_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA53_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.640e-20
Identity = 54/112 (48.21%), Postives = 67/112 (59.82%), Query Frame = 1

Query:  895 PYPGHKNISWTCHGCGGAKHHLTSRFAMEPLQRAHGFKVQRVPNDGDCFFSSIKAALPDGAAAGTEAARAGRALTVAEMREWVAEETGEEQLEFYILQAGAHPEDRWLDFVR 1230
            PYP H ++ W C  C   +H LTS+ A+ P ++AHGFKV  VP DGDCF+SS+  AL          A  G   TVA++REWVA    EE L FY + A A+P   WLDFVR
Sbjct:   47 PYPCHTDVVWMCEACA-VEHCLTSKQALAPFRKAHGFKVYAVPKDGDCFYSSVCMAL----------ASVGVRATVAQLREWVAASMTEEHLRFYQVHAEANPSASWLDFVR 147

The following BLAST results are available for this feature:

BLAST of mRNA_S-firma_F_contig1102.1368.1 vs. uniprot

BLAST of mRNA_S-firma_F_contig1102.1368.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5L3H2_9PHAE	1.470e-94	47.77	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LS81_ECTSI	1.270e-85	53.54	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A836CA53_9STRA	1.640e-20	48.21	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-firma_F_contig1102	contig	S-firma_F_contig1102:14867..19954 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90	2022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	other localisation
Ec32 ortholog description	expressed unknown protein
Ec32 ortholog	Ec-12_004490.1
Exons	4
Model size	3246
Cds size	2328
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_S-firma_F_contig1102.1368.1	prot_S-firma_F_contig1102.1368.1	Sphaerotrichia firma ET2_F female	polypeptide	S-firma_F_contig1102 14969..19138 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622815650.3502698-UTR-S-firma_F_contig1102:14866..14968	1622815650.3502698-UTR-S-firma_F_contig1102:14866..14968	Sphaerotrichia firma ET2_F female	UTR	S-firma_F_contig1102 14867..14968 +
1696949478.924417-UTR-S-firma_F_contig1102:14866..14968	1696949478.924417-UTR-S-firma_F_contig1102:14866..14968	Sphaerotrichia firma ET2_F female	UTR	S-firma_F_contig1102 14867..14968 +
1622815650.41107-UTR-S-firma_F_contig1102:19138..19954	1622815650.41107-UTR-S-firma_F_contig1102:19138..19954	Sphaerotrichia firma ET2_F female	UTR	S-firma_F_contig1102 19139..19954 +
1696949478.9687335-UTR-S-firma_F_contig1102:19138..19954	1696949478.9687335-UTR-S-firma_F_contig1102:19138..19954	Sphaerotrichia firma ET2_F female	UTR	S-firma_F_contig1102 19139..19954 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622815650.3618565-CDS-S-firma_F_contig1102:14968..15874	1622815650.3618565-CDS-S-firma_F_contig1102:14968..15874	Sphaerotrichia firma ET2_F female	CDS	S-firma_F_contig1102 14969..15874 +
1696949478.9334638-CDS-S-firma_F_contig1102:14968..15874	1696949478.9334638-CDS-S-firma_F_contig1102:14968..15874	Sphaerotrichia firma ET2_F female	CDS	S-firma_F_contig1102 14969..15874 +
1622815650.3733747-CDS-S-firma_F_contig1102:16533..16739	1622815650.3733747-CDS-S-firma_F_contig1102:16533..16739	Sphaerotrichia firma ET2_F female	CDS	S-firma_F_contig1102 16534..16739 +
1696949478.9419622-CDS-S-firma_F_contig1102:16533..16739	1696949478.9419622-CDS-S-firma_F_contig1102:16533..16739	Sphaerotrichia firma ET2_F female	CDS	S-firma_F_contig1102 16534..16739 +
1622815650.3851583-CDS-S-firma_F_contig1102:17491..18380	1622815650.3851583-CDS-S-firma_F_contig1102:17491..18380	Sphaerotrichia firma ET2_F female	CDS	S-firma_F_contig1102 17492..18380 +
1696949478.9505885-CDS-S-firma_F_contig1102:17491..18380	1696949478.9505885-CDS-S-firma_F_contig1102:17491..18380	Sphaerotrichia firma ET2_F female	CDS	S-firma_F_contig1102 17492..18380 +
1622815650.3953183-CDS-S-firma_F_contig1102:18811..19138	1622815650.3953183-CDS-S-firma_F_contig1102:18811..19138	Sphaerotrichia firma ET2_F female	CDS	S-firma_F_contig1102 18812..19138 +
1696949478.959198-CDS-S-firma_F_contig1102:18811..19138	1696949478.959198-CDS-S-firma_F_contig1102:18811..19138	Sphaerotrichia firma ET2_F female	CDS	S-firma_F_contig1102 18812..19138 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at S-firma_F_contig1102:14867..19954+
coding sequence from alignment at S-firma_F_contig1102:14867..19954+

protein sequence of mRNA_S-firma_F_contig1102.1368.1

>prot_S-firma_F_contig1102.1368.1 ID=prot_S-firma_F_contig1102.1368.1|Name=mRNA_S-firma_F_contig1102.1368.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=776bp
MLKSQAPSRQKLKGRLPSNKRQKTTTAAPAGAAAGGGGVLGTATPATTGR
SPPVATSFTASIDHPEAGRSLSPRGGQDPRFQIVPHNVAAAAAGADRCAK
SATRTMAAMNGSSAPNSAAALGPVRRVKVRRPEASAEFDWRVQSASATPR
RRDQRAVSPSSTRASGRGRSEASAEAATAGRSPAKRSNSSRSSSGGAQSS
STGAGTSNSGIKCSNLGSSRSPRKKHAAATATAAATSTTTKKKREEEKGE
GEGEEDEEDKLPPCPYPGHKNISWTCHGCGGAKHHLTSRFAMEPLQRAHG
FKVQRVPNDGDCFFSSIKAALPDGAAAGTEAARAGRALTVAEMREWVAEE
TGEEQLEFYILQAGAHPEDRWLDFVRPLDKRIPSDDEEEEDDDDKDDDSY
KDDAESAASLSQSQSQRSQPKSRTSPRKSPSGSRRPSRAAKARGRKMEND
APNADGGSEGGKGKGRRGKRGGGGEDAETSTCTGDEAATATEGGVDDNGD
VTVTAVSTSPTSDRHARRLRRRCSGGGRLSTAAESPAAGRDASKNEKDAK
PSSSLPATAAAAALGSPSRKSARLGRGRQTEGEWRVGADSGGGEGGGTGG
TENGEKGNKGEDEKNEGLPFVQTVEDLRRFVRLEGSVVGHGNCMWADTFA
HHVVSRRLKITILFVDMEREKSAWPYRVLARTMTEHDNEEDERFVVLKRE
PSHFVLLKTAPSPDEKSGAGAGASGGGAATATKRRGGQACFSRSDLPDVV
RRLWQIEPKVKSPASRAAGDGGRRA*

mRNA from alignment at S-firma_F_contig1102:14867..19954+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_S-firma_F_contig1102.1368.1 ID=mRNA_S-firma_F_contig1102.1368.1|Name=mRNA_S-firma_F_contig1102.1368.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=5088bp|location=Sequence derived from alignment at S-firma_F_contig1102:14867..19954+ (Sphaerotrichia firma ET2_F female)
CTGCCGCTGAACAGGCAGAACGCCGCACGCCGCCAACACCACAAGCTACG
TCACGTGCGTTCCCGCTCGCATTCGATCGCGGCAGGAGAGGGGTAGGAAC
GGATGCTCAAGAGTCAGGCACCCTCGCGACAAAAGTTGAAGGGTCGCCTG
CCTTCAAACAAACGACAGAAAACCACAACGGCTGCTCCTGCTGGTGCTGC
CGCAGGCGGAGGGGGAGTTCTCGGCACGGCTACGCCCGCAACAACAGGGA
GAAGCCCGCCGGTTGCCACGTCGTTCACGGCCTCGATCGATCATCCAGAA
GCCGGTCGTTCTCTGTCACCACGCGGGGGGCAGGATCCACGTTTTCAAAT
CGTCCCCCACAACGTTGCAGCAGCAGCAGCAGGTGCCGACCGCTGTGCTA
AGAGCGCCACCAGGACCATGGCCGCGATGAACGGCTCAAGTGCACCCAAT
TCCGCTGCGGCTCTTGGCCCGGTGAGGCGTGTGAAAGTGAGACGTCCGGA
AGCCAGCGCAGAGTTCGATTGGAGAGTGCAGTCAGCTTCGGCCACGCCGC
GGCGGCGAGATCAGAGAGCTGTTAGTCCTAGTAGCACCCGGGCTTCTGGT
AGGGGACGGAGCGAAGCCTCGGCGGAAGCAGCGACGGCGGGACGATCACC
AGCAAAACGAAGCAATAGCAGTAGAAGCAGTAGTGGCGGAGCTCAAAGCA
GCAGCACCGGCGCCGGCACCAGCAACAGCGGCATCAAATGCAGCAACCTC
GGAAGTAGTAGGAGCCCGCGCAAGAAGCACGCGGCGGCAACGGCGACGGC
GGCGGCGACCTCGACGACGACCAAGAAAAAGAGAGAGGAGGAGAAAGGGG
AGGGAGAGGGAGAGGAAGACGAAGAAGACAAACTCCCGCCATGCCCGTAC
CCCGGGCACAAGAACATTTCGTGGACATGCCATGGGTGTGGCGGAGCGAA
ACATCACCTGACCTCGCGCTTCGCCATGGAGCCACTGCAGCGGGCACATG
GCTTCAAGGTACTGACTGTAGAAGTGTATACTCGTAAGCCCAGACTTTGC
AGGCCGCTCAAAGTGTTGAGGCTCTTCGAAGCTCTTGGATCATCGAAGCG
AACAGAAGTCGGCTGTGCGCGGGTGTGAAGTGCGAATTGCTTGTCTGAGG
AAACCCTCCGTCGAACCTACCTCCGGCGTCGGTCTCCACCATCTTATTGC
GTTTTAGCTCTTGGAGGCCACGGCAGCATCGCTCGACAGCGCCGTCTCGT
GGGAAACGGGCGTATGCAATCGTAAATGTACCCGGGGGCGCATGCTCTAT
TGGTGCAACGTAGTTGTCCCCTAGGTCGCAGTCTTTAAAACCCAGAGGTC
TGCTCCGTGGACCTTACCAGCGTCACACACAGAAGAGAGAGATACTTGAG
TTTAACGCACGACCGCGCCCGAACCAGGTTCTGCGACAGCATCTGAATAG
CTCCCAATACAGGGTCAAATTGGGCTTGGCCCCAGGATTCGCGCTCTAAT
CCTGTTCACCCTTTCCCGATCGCAGCGGTCCCGAAATAGCCGTCTTTTGT
CTCACACCATCCTCTTCTCCCTTCGAATCGATCGATCGCGTGTGTCTTCC
ACGCCTCCCACCGCCGCTTGGTCAACACGGCACGACGCGGCACGACTCGA
ACAACCTCAACCTTCAGGTGCAGCGCGTGCCAAACGACGGGGACTGTTTT
TTCTCGTCGATCAAGGCCGCGCTGCCAGACGGGGCGGCGGCGGGCACAGA
AGCGGCGAGGGCGGGAAGGGCGCTTACGGTGGCGGAGATGCGCGAGTGGG
TCGCGGAGGAGACGGGGGAGGAACAGCTGGAGTTCTACATCCTTCAGGCC
GGGGCGCATCCGGAGGATCGGTGGTGGGTGGACCTGCGCCAGCGGTCTGT
TCGGGGTTGTGTTTGGTCGTTTCATGTAGTGCGAGTACGTGCTATTACTG
TACCACACGTGCGGAGAGTTAAATGTGTGCGTGTTTTCGTATCCACGTGA
TTCTGTTTCCAGTACAGTCGCTGTGGAAAATCAAAATCGTTTCTGTGTGT
ACATGTTTTTCCAGATGACGAGTTCTTTTCTCAGCTCGTGTACGAACCGT
GGCTTTTGAGCCTAAACCTGAAAGAACAAGCGAGGCGGGTGAGAGGATGG
TCGGCACCGTGCCTACTACTTGACACGGCGGCTCGCTTGCTTGCCTTCGC
CCCAGTTCGAGCCGCAGGGGTTTGCGCGAGATATTGTCTACGGTGTCCCC
AAGCACACGTGTGTATGCGTCCCTTCCACCTCCTCTGAATCTGCGAGGGC
GTCGGTCTGGCGGTGTTGGCTAGCTGTGTACGCGTGCACGTTGTCCGCGC
GTCGCCGTCCCCCTCTCTCGGGTGGATCGCCACGTTTTCGTTGCGTCCGA
AAAGTCGTATGCACGCGCGGCATGTTGCGTGTTTTCCGCGAGAATGAGTC
GCTTTTCAGATTGGCCGACTGCAGCTTTTGGTGCCAATTCATGTGTGTTT
GTGCGGCAGCGCCCACAGTGCTGGGTGGTCGAAGCATCGTCGCTGCTTGA
AACGTGCCTGCCCCTTTGCTGTGTGTTTTCATGCGCGCGTCTTGTGACCT
TTCCCGTCCTGTGGTGTTCTTCCAGGCTGGACTTCGTGAGGCCTCTCGAC
AAGCGGATACCCAGCGATGACGAGGAAGAGGAGGACGACGACGACAAGGA
CGACGACAGCTACAAGGATGACGCGGAGAGCGCCGCGTCGTTGTCGCAGT
CGCAGTCTCAACGCTCTCAGCCAAAGAGCCGCACCAGCCCCCGCAAATCA
CCTTCCGGGTCCCGCCGACCGTCGAGAGCAGCGAAGGCGCGCGGCCGAAA
AATGGAGAATGACGCTCCGAACGCGGACGGCGGTAGCGAGGGTGGCAAGG
GCAAGGGAAGAAGGGGAAAGAGGGGAGGAGGAGGCGAAGACGCAGAAACG
TCCACCTGCACGGGGGACGAGGCCGCTACCGCGACCGAGGGTGGCGTCGA
CGACAACGGCGATGTCACCGTCACGGCGGTGTCGACTTCGCCGACCAGCG
ATCGCCACGCTCGGCGGCTCCGGCGCCGCTGCAGCGGAGGTGGAAGGTTG
TCGACGGCGGCAGAGTCGCCGGCCGCCGGAAGGGACGCTTCGAAGAACGA
AAAGGACGCGAAACCGTCATCATCTCTGCCGGCAACGGCGGCGGCGGCGG
CGCTGGGAAGCCCGTCTCGGAAGAGCGCTAGGTTAGGGAGGGGGCGGCAG
ACGGAGGGAGAATGGCGTGTGGGCGCGGACAGCGGTGGAGGCGAGGGGGG
GGGGACGGGAGGGACTGAGAACGGGGAAAAAGGCAACAAGGGGGAAGACG
AGAAGAACGAGGGGCTGCCGTTCGTGCAGACGGTGGAGGATCTCCGTCGG
TTCGTCCGGCTGGAAGGCTCGGTCGTGGGGCACGGCAACTGCATGTGGGC
GGACACGTTCGCGCACCACGTGGTGTCTCGCAGACTGAAGATCACCATCC
TCTTCGTTGACATGGTGAGTGGAGCGGGAAAGCTCATCGGGGATCCGTCT
GCGTGTCTTTGCTGCTGCTGTTCTGGGACAACGAAGGTGCCGAAACGGCT
GTGCTCTGAACTCTGCGTGTTGCTTGTCCGGAGTGAGTTGTGTTTGCTTT
CGAATCGTTTCGTTCGAGAGCTCCTAGATCTGCAGCACCTGACTTCTGTT
GTGTTCCCTCACAGGTTAGAAGCAAATGGCAAATGGCAGCGCGCCAAATC
GAAATCGCCCCCCTGGCACAACTATGCGTCCCCCCTTGATTTGTTTCGCT
TTCTCCCTCTCCCTCTCCCATCCCGGGCTGTCTCGGTCTCTCTCTGTCTC
TACTCCTTCCCAAATCACCCCCCTCCCCCTCATCTCTCGCTCTGTCGATA
CCCTCACCCATCCTTTTTTTCTCGCAACGCGTCCACCCCGAAAAGGAGCG
AGAGAAGAGCGCCTGGCCGTACCGGGTGCTGGCCCGAACGATGACGGAGC
ACGACAACGAGGAGGACGAACGGTTCGTCGTTCTCAAGCGAGAACCCAGC
CACTTCGTCCTCCTCAAGACGGCGCCTTCCCCGGACGAGAAGAGTGGGGC
AGGCGCTGGCGCCAGCGGCGGTGGTGCGGCAACCGCGACAAAGCGGCGGG
GGGGGCAGGCATGCTTCTCTCGCTCCGACTTACCCGACGTGGTGAGGCGG
TTGTGGCAGATAGAGCCCAAGGTGAAATCGCCGGCATCTCGAGCAGCGGG
CGACGGCGGGCGACGGGCATAGAGGCTACAAACCAAAGCGTGCCACAAGA
GGATTTTGGTGGTGGTGGTGGTCACGACGTGGAGGTCACGGTGGTTTCCG
CCGCCTTTTTGTGGTTAAGGCGGGGCTTTTCTTGTGCGTGCGTGTAAAAT
AACTAGCGTATGTGTGCCTTTCTTGCCGCGCATGTGGTGGTGTTCGAGGG
TAGGTACATTGGGGAGTCTTGTTGATGCTCGTGTCCTTGTTCTACGCGTA
GAGTACATACGAAGCATGGTTAGATGCATGCTTTGAACTGTGTCCACAGT
AGTCTGACCGGGCATACTGCCGACGAAGATGGCATGCCTGAAAGCTGCTG
CCTTCCTGGCCAGAGCGTCTCTTTCCGTCTTTTCTCGGTCAATGGCAACA
GAGAGCAGTTTGTCCGGTAGTTGTATCATTTTCTCGTGGACACGGGGTGC
GTGCCACGCTCAGACTGTACGGGCGAGCGACCAGCGTATATGTTTTTAAA
TTTGTAAAACGATCCAGTTGTTGTTTGGAACTACGCGGTGGCTTTGCCGT
CTGCAGTGTGTCTTGTGTACCTGGTACAGCGTCGGTGCAGTATTGAATAT
TGAGGTATAGTTTGGTGCGAGGGTAGTCAAGTATCGCGTGTACGCTGGAT
ATGGGGGTGAAGCATTCGGTGTGAGGGTGGTGTGAACTGAGCTTTCCCAT
ATCAACTTTTTGTAGAGAGAATGGAGGAACAAGAATATGGATTTGCCTTA
ATTCCCGCGGCGTCAGTTTTCGCTGGCCTTCCTTTTGTTTCTTGCTTTGT
GCTTGGACTTCGTCGGGTGATACAAGCGCCAAGCTGGC

Coding sequence (CDS) from alignment at S-firma_F_contig1102:14867..19954+

>mRNA_S-firma_F_contig1102.1368.1 ID=mRNA_S-firma_F_contig1102.1368.1|Name=mRNA_S-firma_F_contig1102.1368.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=4656bp|location=Sequence derived from alignment at S-firma_F_contig1102:14867..19954+ (Sphaerotrichia firma ET2_F female)
ATGCTCAAGAGTCAGGCACCCTCGCGACAAAAGTTGAAGGGTCGCCTGCC
TTCAAACAAACGACAGAAAACCACAACGGCTGCTCCTGCTGGTGCTGCCG
CAGGCGGAGGGGGAGTTCTCGGCACGGCTACGCCCGCAACAACAGGGAGA
AGCCCGCCGGTTGCCACGTCGTTCACGGCCTCGATCGATCATCCAGAAGC
CGGTCGTTCTCTGTCACCACGCGGGGGGCAGGATCCACGTTTTCAAATCG
TCCCCCACAACGTTGCAGCAGCAGCAGCAGGTGCCGACCGCTGTGCTAAG
AGCGCCACCAGGACCATGGCCGCGATGAACGGCTCAAGTGCACCCAATTC
CGCTGCGGCTCTTGGCCCGGTGAGGCGTGTGAAAGTGAGACGTCCGGAAG
CCAGCGCAGAGTTCGATTGGAGAGTGCAGTCAGCTTCGGCCACGCCGCGG
CGGCGAGATCAGAGAGCTGTTAGTCCTAGTAGCACCCGGGCTTCTGGTAG
GGGACGGAGCGAAGCCTCGGCGGAAGCAGCGACGGCGGGACGATCACCAG
CAAAACGAAGCAATAGCAGTAGAAGCAGTAGTGGCGGAGCTCAAAGCAGC
AGCACCGGCGCCGGCACCAGCAACAGCGGCATCAAATGCAGCAACCTCGG
AAGTAGTAGGAGCCCGCGCAAGAAGCACGCGGCGGCAACGGCGACGGCGG
CGGCGACCTCGACGACGACCAAGAAAAAGAGAGAGGAGGAGAAAGGGGAG
GGAGAGGGAGAGGAAGACGAAGAAGACAAACTCCCGCCATGCCCGTACCC
CGGGCACAAGAACATTTCGTGGACATGCCATGGGTGTGGCGGAGCGAAAC
ATCACCTGACCTCGCGCTTCGCCATGGAGCCACTGCAGCGGGCACATGGC
TTCAAGATGCTCAAGAGTCAGGCACCCTCGCGACAAAAGTTGAAGGGTCG
CCTGCCTTCAAACAAACGACAGAAAACCACAACGGCTGCTCCTGCTGGTG
CTGCCGCAGGCGGAGGGGGAGTTCTCGGCACGGCTACGCCCGCAACAACA
GGGAGAAGCCCGCCGGTTGCCACGTCGTTCACGGCCTCGATCGATCATCC
AGAAGCCGGTCGTTCTCTGTCACCACGCGGGGGGCAGGATCCACGTTTTC
AAATCGTCCCCCACAACGTTGCAGCAGCAGCAGCAGGTGCCGACCGCTGT
GCTAAGAGCGCCACCAGGACCATGGCCGCGATGAACGGCTCAAGTGCACC
CAATTCCGCTGCGGCTCTTGGCCCGGTGAGGCGTGTGAAAGTGAGACGTC
CGGAAGCCAGCGCAGAGTTCGATTGGAGAGTGCAGTCAGCTTCGGCCACG
CCGCGGCGGCGAGATCAGAGAGCTGTTAGTCCTAGTAGCACCCGGGCTTC
TGGTAGGGGACGGAGCGAAGCCTCGGCGGAAGCAGCGACGGCGGGACGAT
CACCAGCAAAACGAAGCAATAGCAGTAGAAGCAGTAGTGGCGGAGCTCAA
AGCAGCAGCACCGGCGCCGGCACCAGCAACAGCGGCATCAAATGCAGCAA
CCTCGGAAGTAGTAGGAGCCCGCGCAAGAAGCACGCGGCGGCAACGGCGA
CGGCGGCGGCGACCTCGACGACGACCAAGAAAAAGAGAGAGGAGGAGAAA
GGGGAGGGAGAGGGAGAGGAAGACGAAGAAGACAAACTCCCGCCATGCCC
GTACCCCGGGCACAAGAACATTTCGTGGACATGCCATGGGTGTGGCGGAG
CGAAACATCACCTGACCTCGCGCTTCGCCATGGAGCCACTGCAGCGGGCA
CATGGCTTCAAGGTGCAGCGCGTGCCAAACGACGGGGACTGTTTTTTCTC
GTCGATCAAGGCCGCGCTGCCAGACGGGGCGGCGGCGGGCACAGAAGCGG
CGAGGGCGGGAAGGGCGCTTACGGTGGCGGAGATGCGCGAGTGGGTCGCG
GAGGAGACGGGGGAGGAACAGCTGGAGTTCTACATCCTTCAGGCCGGGGC
GCATCCGGAGGATCGGTGGTGCAGCGCGTGCCAAACGACGGGGACTGTTT
TTTCTCGTCGATCAAGGCCGCGCTGCCAGACGGGGCGGCGGCGGGCACAG
AAGCGGCGAGGGCGGGAAGGGCGCTTACGGTGGCGGAGATGCGCGAGTGG
GTCGCGGAGGAGACGGGGGAGGAACAGCTGGAGTTCTACATCCTTCAGGC
CGGGGCGCATCCGGAGGATCGGTGGCTGGACTTCGTGAGGCCTCTCGACA
AGCGGATACCCAGCGATGACGAGGAAGAGGAGGACGACGACGACAAGGAC
GACGACAGCTACAAGGATGACGCGGAGAGCGCCGCGTCGTTGTCGCAGTC
GCAGTCTCAACGCTCTCAGCCAAAGAGCCGCACCAGCCCCCGCAAATCAC
CTTCCGGGTCCCGCCGACCGTCGAGAGCAGCGAAGGCGCGCGGCCGAAAA
ATGGAGAATGACGCTCCGAACGCGGACGGCGGTAGCGAGGGTGGCAAGGG
CAAGGGAAGAAGGGGAAAGAGGGGAGGAGGAGGCGAAGACGCAGAAACGT
CCACCTGCACGGGGGACGAGGCCGCTACCGCGACCGAGGGTGGCGTCGAC
GACAACGGCGATGTCACCGTCACGGCGGTGTCGACTTCGCCGACCAGCGA
TCGCCACGCTCGGCGGCTCCGGCGCCGCTGCAGCGGAGGTGGAAGGTTGT
CGACGGCGGCAGAGTCGCCGGCCGCCGGAAGGGACGCTTCGAAGAACGAA
AAGGACGCGAAACCGTCATCATCTCTGCCGGCAACGGCGGCGGCGGCGGC
GCTGGGAAGCCCGTCTCGGAAGAGCGCTAGGTTAGGGAGGGGGCGGCAGA
CGGAGGGAGAATGGCGTGTGGGCGCGGACAGCGGTGGAGGCGAGGGGGGG
GGGACGGGAGGGACTGAGAACGGGGAAAAAGGCAACAAGGGGGAAGACGA
GAAGAACGAGGGGCTGCCGTTCGTGCAGACGGTGGAGGATCTCCGTCGGT
TCGTCCGGCTGGAAGGCTCGGTCGTGGGGCACGGCAACTGCATGTGGGCG
GACACGTTCGCGCACCACGTGGTGTCTCGCAGACTGAAGATCACCATCCT
CTTCGTTGACATGGCTGGACTTCGTGAGGCCTCTCGACAAGCGGATACCC
AGCGATGACGAGGAAGAGGAGGACGACGACGACAAGGACGACGACAGCTA
CAAGGATGACGCGGAGAGCGCCGCGTCGTTGTCGCAGTCGCAGTCTCAAC
GCTCTCAGCCAAAGAGCCGCACCAGCCCCCGCAAATCACCTTCCGGGTCC
CGCCGACCGTCGAGAGCAGCGAAGGCGCGCGGCCGAAAAATGGAGAATGA
CGCTCCGAACGCGGACGGCGGTAGCGAGGGTGGCAAGGGCAAGGGAAGAA
GGGGAAAGAGGGGAGGAGGAGGCGAAGACGCAGAAACGTCCACCTGCACG
GGGGACGAGGCCGCTACCGCGACCGAGGGTGGCGTCGACGACAACGGCGA
TGTCACCGTCACGGCGGTGTCGACTTCGCCGACCAGCGATCGCCACGCTC
GGCGGCTCCGGCGCCGCTGCAGCGGAGGTGGAAGGTTGTCGACGGCGGCA
GAGTCGCCGGCCGCCGGAAGGGACGCTTCGAAGAACGAAAAGGACGCGAA
ACCGTCATCATCTCTGCCGGCAACGGCGGCGGCGGCGGCGCTGGGAAGCC
CGTCTCGGAAGAGCGCTAGGTTAGGGAGGGGGCGGCAGACGGAGGGAGAA
TGGCGTGTGGGCGCGGACAGCGGTGGAGGCGAGGGGGGGGGGACGGGAGG
GACTGAGAACGGGGAAAAAGGCAACAAGGGGGAAGACGAGAAGAACGAGG
GGCTGCCGTTCGTGCAGACGGTGGAGGATCTCCGTCGGTTCGTCCGGCTG
GAAGGCTCGGTCGTGGGGCACGGCAACTGCATGTGGGCGGACACGTTCGC
GCACCACGTGGTGTCTCGCAGACTGAAGATCACCATCCTCTTCGTTGACA
TGGAGCGAGAGAAGAGCGCCTGGCCGTACCGGGTGCTGGCCCGAACGATG
ACGGAGCACGACAACGAGGAGGACGAACGGTTCGTCGTTCTCAAGCGAGA
ACCCAGCCACTTCGTCCTCCTCAAGACGGCGCCTTCCCCGGACGAGAAGA
GTGGGGCAGGCGCTGGCGCCAGCGGCGGTGGTGCGGCAACCGCGACAAAG
CGGCGGGGGGGGCAGGCATGCTTCTCTCGCTCCGACTTACCCGACGTGGT
GAGGCGGTTGTGGCAGATAGAGCCCAAGGTGAAATCGCCGGCATCTCGAG
CAGCGGGCGACGGCGGGCGACGGGCATAGGAGCGAGAGAAGAGCGCCTGG
CCGTACCGGGTGCTGGCCCGAACGATGACGGAGCACGACAACGAGGAGGA
CGAACGGTTCGTCGTTCTCAAGCGAGAACCCAGCCACTTCGTCCTCCTCA
AGACGGCGCCTTCCCCGGACGAGAAGAGTGGGGCAGGCGCTGGCGCCAGC
GGCGGTGGTGCGGCAACCGCGACAAAGCGGCGGGGGGGGCAGGCATGCTT
CTCTCGCTCCGACTTACCCGACGTGGTGAGGCGGTTGTGGCAGATAGAGC
CCAAGGTGAAATCGCCGGCATCTCGAGCAGCGGGCGACGGCGGGCGACGG
GCATAG