prot_S-firma_F_contig11015.1362.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig11015.1362.1
Unique Nameprot_S-firma_F_contig11015.1362.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length187
Homology
BLAST of mRNA_S-firma_F_contig11015.1362.1 vs. uniprot
Match: A0A6H5KVF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF9_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 1.390e-74
Identity = 149/192 (77.60%), Postives = 163/192 (84.90%), Query Frame = 0
Query:    1 SSWRGAVHGFDNGGGGXXXXXXXXXXXXXXXXX------GSAANSLQGGARGGNQLHTNAVLEFEERLEAIKTGLAQGVDCIVWEDKTRQVEATMSVVEGDAGSSKLVFAAKGSYLIWRAPVRPMQMNSSLKVGLGHGDLQGLANQDDSTFLNMRSGGTSTEEARIVIVQVADKEMRNDLVSSVRRLLTQVR 186
            ++WRGAVHGFDNGGG    XXXXXXXXXXXXXX      GS +NS+ G +R  NQLHTNAVLEFEERLEAIK GL+QGVDC VWEDKTRQVEA M V EG+AGSSKL FAAKGSYLIWRAPVRPM M+S LKV LGHGDLQGL +QDDST+L MR GG+S +EAR+VIVQVADKEMRNDLVSSVRRLLTQ +
Sbjct:  741 TAWRGAVHGFDNGGGSGAGXXXXXXXXXXXXXXSHASSPGSTSNSVLGSSRS-NQLHTNAVLEFEERLEAIKVGLSQGVDCWVWEDKTRQVEAIMKVEEGEAGSSKLTFAAKGSYLIWRAPVRPMHMDSRLKVSLGHGDLQGLGSQDDSTYLTMRCGGSSADEARVVIVQVADKEMRNDLVSSVRRLLTQAK 931          
BLAST of mRNA_S-firma_F_contig11015.1362.1 vs. uniprot
Match: D8LTS1_ECTSI (Myosin D n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTS1_ECTSI)

HSP 1 Score: 249 bits (635), Expect = 4.780e-73
Identity = 152/200 (76.00%), Postives = 166/200 (83.00%), Query Frame = 0
Query:    1 SSWRGAVHGFDNGGGGXXXXXXXXXXXXXXXXX--------------GSAANSLQGGARGGNQLHTNAVLEFEERLEAIKTGLAQGVDCIVWEDKTRQVEATMSVVEGDAGSSKLVFAAKGSYLIWRAPVRPMQMNSSLKVGLGHGDLQGLANQDDSTFLNMRSGGTSTEEARIVIVQVADKEMRNDLVSSVRRLLTQVR 186
            ++WRGAVHGFDNGGG XXXXXXXXXXXXXXXXX              GS +NS+ G +R  NQLHTNAVLEFEERLEAIK GL+QGVDC VWEDKTRQVEA M V EG+AGSSKL FAAKGSYLIWRAPVRPMQM+S LKV LGHGDL GL +QDDST+L MR GG+S +EAR+VIVQVADKEMRNDLVSSVRRLLTQ +
Sbjct: 1459 TAWRGAVHGFDNGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGSTSNSVPGSSRS-NQLHTNAVLEFEERLEAIKVGLSQGVDCWVWEDKTRQVEAIMKVEEGEAGSSKLTFAAKGSYLIWRAPVRPMQMDSRLKVSLGHGDLHGLGSQDDSTYLTMRCGGSSADEARMVIVQVADKEMRNDLVSSVRRLLTQAK 1657          
BLAST of mRNA_S-firma_F_contig11015.1362.1 vs. uniprot
Match: A0A835YXT9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXT9_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 4.840e-15
Identity = 50/141 (35.46%), Postives = 85/141 (60.28%), Query Frame = 0
Query:   57 EFEERLEAIKTGLAQGVDCIVWEDKTRQVEATMSVVE-----GDAGSS------KLVFAAKGSYLIWRAPVRPMQMNSSLKVGLGHGDLQGLANQDDSTFLNM--RSGGTSTEEARIVIVQVADKEMRNDLVSSVRRLLTQ 184
            EFE+RL AIK  LA GVD  VW+ + ++V+A + + E     G+A +       +L F  +G+YLIWR  ++P+ +++ L V  G  D   +  Q DS  L++  +  G S E  R+V+++++D ++R +L S +R+LLT+
Sbjct: 1964 EFEDRLMAIKRFLAAGVDVTVWDGRNKKVDAVLKLEEKSPPGGEAHADPECPYPRLEFHLRGAYLIWRNNIKPLAIDTFLMVQQGAKDTPEVGEQYDSLCLSLLCQPQGLS-EPDRVVVLRLSDDDLRRELYSGIRKLLTE 2103          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig11015.1362.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KVF9_9PHAE1.390e-7477.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTS1_ECTSI4.780e-7376.00Myosin D n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
A0A835YXT9_9STRA4.840e-1535.46P-loop containing nucleoside triphosphate hydrolas... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig11015contigS-firma_F_contig11015:1594..3712 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig11015.1362.1mRNA_S-firma_F_contig11015.1362.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig11015 1594..3712 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig11015.1362.1 ID=prot_S-firma_F_contig11015.1362.1|Name=mRNA_S-firma_F_contig11015.1362.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=187bp
SSWRGAVHGFDNGGGGGANGPSHSNAGSNVGSPGSAANSLQGGARGGNQL
HTNAVLEFEERLEAIKTGLAQGVDCIVWEDKTRQVEATMSVVEGDAGSSK
LVFAAKGSYLIWRAPVRPMQMNSSLKVGLGHGDLQGLANQDDSTFLNMRS
GGTSTEEARIVIVQVADKEMRNDLVSSVRRLLTQVR*
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