prot_S-firma_F_contig11007.1348.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig11007.1348.1
Unique Nameprot_S-firma_F_contig11007.1348.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length145
Homology
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BLAST of mRNA_S-firma_F_contig11007.1348.1 vs. uniprot
Match: A0A7S0PF82_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PF82_CAFRO)

HSP 1 Score: 138 bits (347), Expect = 1.310e-38
Identity = 81/152 (53.29%), Postives = 96/152 (63.16%), Query Frame = 0 
Query:    1 TRSAQVLDGSWQFGGPTEVPDATDIDPTAV------HTPDTAT----VPSAFDVALPGVEGPRGTAFYRTTFDLPAGTGGLVHFAACSFYCSVFVSEAADGSAGYHHVGDHRASGYSPFWLTIPPSSLSSTREMLVVVNNEFNSTTAPTHTG 142
            TR+ QVLDG+W F     VP    +DPTA+         D +T    VP + DV  PGVEGPRGT  YRTTF    G G L+ F ACSFYC VFV    DG+     +GDHRA GY+PFW+  P +S ++ RE+LVVVNNEFNSTTAP HTG
Sbjct:   43 TRTLQVLDGTWDF-----VPAIAGVDPTAIPYEAAKELVDKSTSSMGVPGSCDVTAPGVEGPRGTFVYRTTFAGSPGVGSLLQFMACSFYCRVFV----DGA----ELGDHRAGGYAPFWMAAPAAS-ATRREVLVVVNNEFNSTTAPVHTG 180
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BLAST of mRNA_S-firma_F_contig11007.1348.1 vs. uniprot
Match: F2UD55_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UD55_SALR5)

HSP 1 Score: 144 bits (362), Expect = 6.940e-38
Identity = 77/142 (54.23%), Postives = 97/142 (68.31%), Query Frame = 0 
Query:    1 TRSAQVLDGSWQFGGPTEVPDATDIDPTAVHTPDTATVPSAFDVALPGVEGPRGTAFYRTTFDLPAGTGGLVHFAACSFYCSVFVSEAADGSAGYHHVGDHRASGYSPFWLTIPPSSLSSTREMLVVVNNEFNSTTAPTHTG 142
            TR+  +L+G W FG    VPDA + D       ++ +VP+AFDVA PGV GPRGTAFYR  FDL     GL++FAACSFYC VFV    DG A    +GDHRA GY  FW+ +P S+ + TRE++V+V+N FN+TTAPTHTG
Sbjct:   37 TRTLAILNGEWDFGYLDNVPDAINFDIKNAVFNESMSVPAAFDVAQPGVMGPRGTAFYRRQFDLSPNHKGLLYFAACSFYCRVFV----DGQA----LGDHRAGGYQAFWMHVPAST-NHTRELVVLVDNRFNATTAPTHTG 169
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BLAST of mRNA_S-firma_F_contig11007.1348.1 vs. uniprot
Match: A0A813ATS4_9DINO (4a-hydroxytetrahydrobiopterin dehydratase n=5 Tax=Sar TaxID=2698737 RepID=A0A813ATS4_9DINO)

HSP 1 Score: 120 bits (300), Expect = 1.010e-28
Identity = 72/140 (51.43%), Postives = 86/140 (61.43%), Query Frame = 0 
Query:    9 GSWQFGGPTEVPDATDIDPTAV------HTPDTAT----VPSAFDVALPGVEGPRGTAFYRTTFDLPAGTGGLVHFAACSFYCSVFVSEAADGSAGYHHVGDHRASGYSPFWLTIPPSSLSSTREMLVVVNNEFNSTTAP 138
            G+W F     VP    +DPTA+         D +T    VP + DV  PGVEGPRGT  YRTTF    G G L+ F ACSFYC VFV    DG+     +GDHRA GY+PFW+  P +S ++ RE+LVVVNNEFNSTTAP
Sbjct:   85 GTWDF-----VPAIAGVDPTAIPYEAAKELVDKSTSSMGVPGSCDVTAPGVEGPRGTFVYRTTFAGSPGVGSLLQFMACSFYCRVFV----DGA----ELGDHRAGGYAPFWMAAPAAS-ATRREVLVVVNNEFNSTTAP 210
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig11007.1348.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7S0PF82_CAFRO1.310e-3853.29Hypothetical protein (Fragment) n=1 Tax=Cafeteria ... [more]
F2UD55_SALR56.940e-3854.23Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
A0A813ATS4_9DINO1.010e-2851.434a-hydroxytetrahydrobiopterin dehydratase n=5 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008979Galactose-binding-like domain superfamilyGENE3D2.60.120.260coord: 1..143
e-value: 2.7E-11
score: 45.4
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 2..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig11007contigS-firma_F_contig11007:89..523 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig11007.1348.1mRNA_S-firma_F_contig11007.1348.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig11007 89..523 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig11007.1348.1 ID=prot_S-firma_F_contig11007.1348.1|Name=mRNA_S-firma_F_contig11007.1348.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=145bp
TRSAQVLDGSWQFGGPTEVPDATDIDPTAVHTPDTATVPSAFDVALPGVE
GPRGTAFYRTTFDLPAGTGGLVHFAACSFYCSVFVSEAADGSAGYHHVGD
HRASGYSPFWLTIPPSSLSSTREMLVVVNNEFNSTTAPTHTGCA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008979Galactose-bd-like_sf