prot_S-firma_F_contig1100.1341.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1100.1341.1
Unique Nameprot_S-firma_F_contig1100.1341.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length672
Homology
BLAST of mRNA_S-firma_F_contig1100.1341.1 vs. uniprot
Match: Q8QNA2_ESV1K (EsV-1-186 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNA2_ESV1K)

HSP 1 Score: 793 bits (2047), Expect = 1.260e-280
Identity = 421/666 (63.21%), Postives = 525/666 (78.83%), Query Frame = 0
Query:    5 IGRVFCGFIAQYLGVYVSINVFSTSGGTIFWWTQSAITIAAMLLTHDRHWPERVVHVATGIAAYVPFRYKRFSIPLLASICVSNALGQVFAYVSMKRFYPELSPKEVGTLRFLGVFLLFGVIFSSIVASVAGSLAFYCFGSNVELSSVIINYLLGHVCGTLALLYPLLIVPILWKDRPAEYKSSFMYGLSVFVVVTCLCVSTNYHLFGFAAIVAVYGLFIWVSMYIHQCYASLIQLACTCSILGLTAGGRGPFVYVIKGGGAEAVLIGTQMGETALTAVSAFIVILVSQLRALQESERESRRRTEELTERRTLDLYRIGHDMNNNSTLVHAICEVGGEEGD--VLEIIKAVSILNSVLVSDMVDMVSGREA-RVVSKEDVDITEVMEIYSMIAKGFLFLEGKEKCITIRVEILSE-ENSVVYTNRERLHQVICNLVSNAVKYTESGEIVLEVEDSSVDSCTKIRVADSGIGLSEEDVSQVFDIFFRSERASKANSGTGLGLANVRRVCEAIDAKIEVSSPGEGEGTTFTLILPRRGRDEMQIPKS----FSLHVLVMDDSLVILRLITKYLISFGCKVVCTTSAEESRVLL-RGGDNTFDVVITDNYMGGIESGPDFISNIRRGKVTGLHEAIPCILCSGEHHQFNDPKTIAITKPFSSDDIAAAL 661
            +GR+  GFIAQY+GV VS+ VF + GGTIFWWTQ+AI IAAML T D HWPERV H+A+ +  Y+PFR+++F +PLL +IC SNALGQ F YVSMK FYP LSPKEVGTLRFL +F+ F VI +SIVAS+ GSLAFY  G++VELSSV++NY LGH+ GT+ LLYPLLIVP LWK+RP    ++ + G+SVF+ +T +C  ++YHLFGFA+IV +Y L + VS YI Q  ASL+QLACT SILG TA GRGPFV+V+K G AE VLIGTQMG  AL+A++AF+VILVSQLR LQ+SER SR +  EL ER+TLDLYRIGHDM NN+TL+ AICEVG  +GD  +LE +K+V+IL +VLVSDMVDMV+G++  R V KEDVDITE++ +YSM+  G L LE K+K IT+ V I  E EN   YTNRERLHQ++CNLVSNAVKYT+ G+IVL    SS +S  +IRV DSG+GLSE DV +VFD+FFRSERAS+ NSGTGLGL+NVR++C+AIDAKIEVSSPGEG+G+TFTL+LPRR R  +  P+     FS  +L MDDS++ILRL++KYL SFGC+VV   SAEESR LL +     FD+VITD+ MG  E+G DFI+++R+G V GL   +PCILCSGE H+F DP+T++I KPFS+ DIA AL
Sbjct:    5 VGRILGGFIAQYIGVLVSMEVFVSPGGTIFWWTQTAIAIAAMLHTSDTHWPERVGHIASSMLTYIPFRFRKFPVPLLLAICASNALGQFFGYVSMKHFYPVLSPKEVGTLRFLAIFVAFPVIIASIVASIPGSLAFYFLGTDVELSSVVVNYTLGHISGTITLLYPLLIVPTLWKNRPRS-PNTLVCGISVFLGITSMCPFSDYHLFGFASIVGMYALLVGVSAYIDQFQASLVQLACTGSILGFTAAGRGPFVHVMKDGEAEEVLIGTQMGIAALSALNAFVVILVSQLRDLQKSERISRCQAAELAERQTLDLYRIGHDMKNNATLIQAICEVGETDGDNRILETVKSVNILGNVLVSDMVDMVNGKQVHRAVPKEDVDITELLNVYSMVGTGLLLLEEKDKDITVGVRIDDESENFGAYTNRERLHQIMCNLVSNAVKYTQCGKIVLSAGCSS-ESTVEIRVTDSGVGLSEADVCKVFDLFFRSERASQINSGTGLGLSNVRKICDAIDAKIEVSSPGEGKGSTFTLVLPRRRRSTVSSPRQISTQFSFRILAMDDSILILRLLSKYLTSFGCEVVNACSAEESRALLGQPNQEKFDMVITDSSMGD-ETGIDFINSLRKGAVRGLPSDLPCILCSGEGHEFGDPRTLSIIKPFSAADIAEAL 667          
BLAST of mRNA_S-firma_F_contig1100.1341.1 vs. uniprot
Match: D8LPK5_ECTSI (Histidine kinase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPK5_ECTSI)

HSP 1 Score: 756 bits (1952), Expect = 3.140e-266
Identity = 402/671 (59.91%), Postives = 513/671 (76.45%), Query Frame = 0
Query:    1 MFAHIGRVFCGFIAQYLGVYVSINVFSTSGGTIFWWTQSAITIAAMLLTHDRHWPERVVHVATGIAAYVPFRYKRFSIPLLASICVSNALGQVFAYVSMKRFYPELSPKEVGTLRFLGVFLLFGVIFSSIVASVAGSLAFYCFGSNVELSSVIINYLLGHVCGTLALLYPLLIVPILWKDRPAEYKSSFMYGLSVFVVVTCLCVSTNYHLFGFAAIVAVYGLFIWVSMYIHQCYASLIQLACTCSILGLTAGGRGPFVYVIKGGGAEAVLIGTQMGETALTAVSAFIVILVSQLRALQESERESRRRTEELTERRTLDLYRIGHDMNNNSTLVHAICEVGGEEGD--VLEIIKAVSILNSVLVSDMVDMVSGREA-RVVSKEDVDITEVMEIYSMIAKGFLFLEGKEKCITIRVEILSEENSVVYTNRERLHQVICNLVSNAVKYTESGEIVLEVEDSSVDSCTKIRVADSGIGLSEEDVSQVFDIFFRSERASKANSGTGLGLANVRRVCEAIDAKIEVSSPGEGEGTTFTLILPRRGRDEMQIPKS----FSLHVLVMDDSLVILRLITKYLISFGCKVVCTTSAEESRVLL-RGGDNTFDVVITDNYMGGIESGPDFISNIRRGKVTGLHEAIPCILCSGEHHQFNDPKTIAITKPFSSDDIAAALGL 663
            MFA +GR+  GFIAQY+GV VSI VF++ GGTIFWWTQ+AI IAAML T D HWPERV H+A+    Y+PFR+++F +PLL +IC SN++GQ F YVSMK F+P LS KEVGTL+FL +F+ F V+ +SIVAS+ GSLAFY  G++V+L SV +NY LGH+ GT+ALLYPLLIVP LWK R +   ++ + G S F  +T +C  +NYHL GFA+IV +YGL + VS  I Q +ASL+QLAC  SILGLTA GRGPFV+ +K    + VLIGTQMG  AL+A++AF+VILVSQLR LQ  E+ SR + EEL ER+TLDLYRIGHDM NN+TL+ A+CEVG  +GD  +LE +K+V+IL +VLVSDMVDMV+G +A RVV KEDVDI E++ +YSM+  G L LEGK+K IT+ V I   E   VY N+ERLHQ++CN++SN+VKYT+SG IVLE    S +S  +IRV DSGIG+SE DV +VFD+FFRS  AS+ NSGTGLGL+NVR++C +I AKI+VSSPGEG+G+TFTL+ PR  R  +  P+     FS H+L MDDS++I  L++KYL SFGC VV   SAEESR LL +     FD+VITD++MG  E+G DFI+++RRG V GL   +PCILCSG+ H+F+DP+TI+ITKPFSS DIA AL +
Sbjct:    1 MFACLGRILGGFIAQYIGVLVSIKVFASPGGTIFWWTQTAIAIAAMLHTPDPHWPERVGHIASSTLTYIPFRFRKFPVPLLFAICASNSMGQFFGYVSMKHFFPVLSQKEVGTLKFLAIFVAFPVVIASIVASIPGSLAFYFLGTDVDLFSVAVNYTLGHMSGTIALLYPLLIVPALWKTR-SRSPNTLVCGTSAFFGITSMCAFSNYHLLGFASIVVMYGLLVGVSACIDQFHASLVQLACMGSILGLTAAGRGPFVHAVKDRETDEVLIGTQMGIAALSALNAFVVILVSQLRDLQTFEKISRCQAEELAERQTLDLYRIGHDMKNNATLIQALCEVGETDGDNSILETVKSVNILGNVLVSDMVDMVNGSKAHRVVPKEDVDIKELLNVYSMVGTGMLLLEGKDKDITMGVRIADGEKLEVYINKERLHQIMCNILSNSVKYTQSGTIVLEAGCCS-ESTVEIRVTDSGIGMSEADVCKVFDLFFRSGPASQINSGTGLGLSNVRKICNSIGAKIDVSSPGEGQGSTFTLVFPRTRRSIVSSPRQISTQFSFHILAMDDSVLIRGLMSKYLTSFGCDVVSACSAEESRALLGQPNQEKFDIVITDSFMGD-ETGIDFINSLRRGAVRGLSSDLPCILCSGDIHEFDDPRTISITKPFSSADIADALNI 668          
BLAST of mRNA_S-firma_F_contig1100.1341.1 vs. uniprot
Match: A0A6H5JPI3_9PHAE (MASE1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPI3_9PHAE)

HSP 1 Score: 648 bits (1672), Expect = 8.930e-225
Identity = 369/673 (54.83%), Postives = 466/673 (69.24%), Query Frame = 0
Query:    1 MFAHIGRVFCGFIAQYLGVYVSINVFSTSGGTIFWWTQSAITIAAMLLTHDRHWPERVVHVATGIAAYVPFRYKRFSIPLLASICVSNALGQVFAYVSMKRFYPELSPKEVGTLRFLGVFLLFGVIFSSIVASVAGSLAFYCFGSNVELSSVIINYLLGHVCGTLALLYPLLIVPILWKDRPAEYKSSFMYGLSVFVVVTCLCVSTNYHLFGFAAIVAV-YGLFIWVSMYIHQCYASLIQLACTCSILGLTAGGRGPFVYVIKGGGAEAVLIG-TQMGETALTAVSAFIVILVSQLRALQESERESRRRTEELTERRTLDLYRIGHDMNNNSTLVHAICEVGGEEGD--VLEIIKAVSILNSVLVSDMVDMVSGREA-RVVSKEDVDITEVMEIYSMIAKGFLFLEGKEKCITIRVEILSE-ENSVVYTNRERLHQVICNLVSNAVKYTESGEIVLEVEDSSVDSCTKIRVADSGIGLSEEDVSQVFDIFFRSERASKANSGTGLGLANVRRVCEAIDAKIEVSSPGEGEGTTFTLILPRRGRD----EMQIPKSFSLHVLVMDDSLVILRLITKYLISFGCKVVCTTSAEESRVLLRGGDNTFDVVITDNYMGGIESGPDFISNIRRGKVTGLHEAIPCILCSGEHHQFNDPKTIAITKPFSSDDIAAALGL 663
            MF  +GR+  GFIAQY+GV  SI VF++ GGTIF WTQ+AI IAAML T D HWPERV H+A+    Y+PFR+++F +PLL ++C SN+LGQ+F YVSMK FYP LS +EVGTLRFL +F+ F VI +SIVAS+ GSLAFY  G++VELSSV++NY LGH+ GT+ LLYPLLIVP LWK RP    ++ + G+S F+ +T +C  +NYHL G A+IV + Y L I VS Y+ Q  ASL+QLA T SILG TA GRGPFV+V KGG AE VLIG TQMG  AL+A++AF+VILVSQLR LQ+ ER SR + EEL ER+TLDLYRIGHDM NN+TL+  ICEVG  + D  +LE +K+V+IL +VLVSDMVDMV+G++  RVV KEDVDI E++ +YSM+  G L LEGK+K IT+ V I  + EN    TNRERLH+++CNL+SNAV                           +GIGLSE DV +VFD+FFRS RAS+ NSGTGL                EVSSPGEG+G+TFTL LPR+ R     + Q+   FS  VL MDDS++ILR ++KYL S GC+                    FDVVITD+++G  E+G DF  ++RRG V GL   +P ILCSG+ H+  DP+T++ITKPFS  DI  AL +
Sbjct:    1 MFPCVGRILGGFIAQYIGVLASIRVFASPGGTIFSWTQTAIAIAAMLHTPDTHWPERVGHIASSTLPYIPFRFRKFPVPLLLAVCASNSLGQLFGYVSMKHFYPVLSSEEVGTLRFLAIFVAFPVIIASIVASIPGSLAFYFLGTDVELSSVVVNYTLGHISGTITLLYPLLIVPTLWKTRPRS-PNALVCGISAFLGITSMCPVSNYHLLGLASIVGIMYALLIGVSAYVDQFQASLVQLAFTGSILGFTAAGRGPFVHVTKGGEAEEVLIGSTQMGIAALSALNAFVVILVSQLRDLQKFERISRCQAEELAERQTLDLYRIGHDMKNNATLIQTICEVGETDADNRILETVKSVNILGNVLVSDMVDMVNGKQVHRVVPKEDVDIAELLNVYSMVGTGLLLLEGKDKDITVGVRIDDDGENFGAQTNRERLHKIVCNLLSNAV---------------------------NGIGLSEADVCKVFDLFFRSGRASQINSGTGL----------------EVSSPGEGKGSTFTLFLPRKRRSIVSRQKQVSTRFSFRVLAMDDSVLILRPLSKYLSSLGCE--------------------FDVVITDSFIGD-ETGIDFFCSVRRGGVMGLPRDLPSILCSGDSHESGDPRTLSITKPFSVADICHALNI 608          
BLAST of mRNA_S-firma_F_contig1100.1341.1 vs. uniprot
Match: D7G325_ECTSI (Histidine kinase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G325_ECTSI)

HSP 1 Score: 438 bits (1127), Expect = 1.280e-145
Identity = 239/395 (60.51%), Postives = 301/395 (76.20%), Query Frame = 0
Query:  275 MGETALTAVSAFIVILVSQLRALQESERESRRRTEELTERRTLDLYRIGHDMNNNSTLVHAICEVGGEEGDVLEIIKAVSILNSVLVSDMVDMVSGREA-RVVSKEDVDITEVMEIYSMIAKGFLFLEGKEKCITIRVEILSEENSVVYTNRERLHQVICNLVSNAVKYTESGEIVLEVEDSSVDSCTKIRVADSGIGLSEEDVSQVFDIFFRSERASKANSGTGLGLANVRRVCEAIDAKIEVSSPGEGEGTTFTLILPRRGRDEM----QIPKSFSLHVLVMDDSLVILRLITKYLISFGCKVVCTTSAEESRVLL-RGGDNTFDVVITDNYMGGIESGPDFISNIRRGKVTGLHEAIPCILCSGEHHQFNDPKTIAITKPFSSDDIAAALGL 663
            MG  AL A++AF+VILVS LR LQ  ER SR + EEL ER+TLDLYRIGHDM NN+TL+ A+CEV   +  +LE +K+++IL +VLVSDMVDMV+G++A RVV KEDVD+TE++ +YSM+  G L LEGK+K +T+ V I   E   VYTNRERLHQ++CNL+SNAVKYT++G+IVL V     ++  +IRV DSGIGL E DV +VFD+FFRS RAS+ +SGTGLGL+NVR +C+AI AKI VSSPGEG+G TFTL+LPRR R       QI   FS  VL MDDS+VILRL++KY  SFGC+VV   SAEESR LL +     FDVVITD++MG  E+G D I ++RRG V GL   +PCILCSG+ H+F+DP+T++ITKPFSS DIA AL +
Sbjct:    1 MGIAALLALNAFVVILVSLLRDLQTFERISRCQAEELAERQTLDLYRIGHDMKNNATLIQAVCEVPDADNRILETVKSINILGNVLVSDMVDMVNGKQAHRVVPKEDVDVTELLNVYSMVGTGMLLLEGKDKDVTVGVRIAGSEKFEVYTNRERLHQIMCNLLSNAVKYTQTGKIVL-VAGCCSENTVEIRVVDSGIGLCEADVCRVFDLFFRSRRASQISSGTGLGLSNVRNICDAIGAKIGVSSPGEGKGCTFTLVLPRRRRSIFSGHGQISMQFSFRVLAMDDSIVILRLLSKYFTSFGCEVVNACSAEESRALLGQPNQEKFDVVITDSFMGD-ETGIDVIHSLRRGAVRGLPSDLPCILCSGDSHEFDDPRTVSITKPFSSADIADALNI 393          
BLAST of mRNA_S-firma_F_contig1100.1341.1 vs. uniprot
Match: A0A6H5JSS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSS5_9PHAE)

HSP 1 Score: 379 bits (972), Expect = 4.070e-117
Identity = 258/697 (37.02%), Postives = 388/697 (55.67%), Query Frame = 0
Query:    5 IGRVFCGFIAQYLGVYVSINVFSTSGGTIFWWTQSAITIAAMLLTHDRHWPERVVHVATGIAAY--VPFRYKRFSIPLLASICVSNALGQVFAYVSMKRFYPE--LSPKEVGTLRFLGVFLLFGVIFSSIVASVAGSLAFYC-FGSNVELSSVIINYLLGHVCGTLALLYPLLIVPILWKDRPAEYKSSFMYGLSVFVVVTCLCVSTNYHLFGFAAIVAVYGLFIWVSMYIHQCYASLIQLACTCSILGLTAGGRGPFVYVIK-GGGAEAVLIGTQMGETALTAVSAFIVILVSQLRALQESERESRRRTEELTERRTLDLYRIGHDMNNNSTLVHAICEV-------GGEEGDVLEIIKAVSILNSVLVSDMVDMVSGR-EARVVSKEDVDITEVMEIYSMIAKGFLFLEGKEKCITIRVEILSEENSVVYTNRERLHQVICNLVSNAVKYTESGEIVLEV---EDSSVDSCTKIRVADSGIGLSEEDVSQVFDIFFRSERASKANSGTGLGLANVRRVCEAIDAKIEVSSPGEGEGTTFTLILPRRGRDEMQI----------PKSFSLHVLVMDDSLVILRLITKYLISFGCKVVCTTSAEESRVLLRGGDNTFDVVITDNYMG-GIESGPDFISNIRRGKVTGLHEAIPCILCSGEH---HQFNDPKTIAITKPFSSDDIAAALGLLVPEHTA 670
            + RV  GF  Q L VY SI+VF     T + WT  AIT   +  T      ER  HV +G  AY  + F Y+RF   L+ ++ + NALG V      +R +P   + P+++  L+FLG  +LF V   S+ ASV GS+AF   FG+N  L  V +NY +GH+ GT  +LYP +++P LW  +    +++ + GL+  V++      T+Y +F F AI+  YG  + VS  + Q  A L+       +LGLT GGRGPF  V     GA  V++ TQ+  T  T  SAF+ I  ++LR LQ  E+ S  R E++ E +T+ L ++ HDM NN+T +  + E         G+    L++I+A   +N  LV DM D        R + + +VD+ E+ E++   AK  + + G+    T+ +   +E    V+T+R+RLHQ++ NLV NAVKYT+SG IVL V   +D+       ++V D+GIG+  ED+ ++F   FR  R ++   G+GLGL++V  +C+ ++AK+++ SPG  +GTT TL LP  G D  +           P +    VLV+DDSLVI  ++ + LI  GC V    S E+++  L       DVVITD+YMG G  +G D IS+IR+G++ G+ + +PCILCSG      +F D  T+ + KPFS  D++ AL   V  H+A
Sbjct:   34 LARVAAGFALQLLSVYTSISVFVKD--TSYLWTGMAITAGLLFNTPAECRLERFAHVFSGALAYYLLDFHYERFPTGLVVAVALCNALGCVVGEHCFRRVFPRTPMIPRDIEQLKFLGALMLFPVFAGSLAASVPGSVAFRLYFGAN--LWKVFVNYTVGHISGTTVVLYPTMVLPALWSSKQ-PIQAAMVLGLAGVVLMFAF---TDYGVFAFGAILGAYGSIVTVSTQLDQWNACLMGAVAAALMLGLTMGGRGPFNSVCYFEEGARNVILSTQLATTVATGCSAFVSISSTRLRKLQAREKASLERAEKMIETQTVQLCKVAHDMLNNTTFIWGVTESLADTLPPTGQSASQLKMIQAAITMNGTLVKDMTDSFKPEGHGRPIRRTEVDVQEMAELHVNFAKALVRMAGRSIETTLDLGT-AEGEFKVFTDRDRLHQILSNLVGNAVKYTKSGTIVLRVSRQDDAGTTGSVILQVIDTGIGIDAEDIPKIFGTLFRCARGAQLAPGSGLGLSSVLDMCKLLEAKVDLQSPGVDKGTTVTLELPI-GTDPTKTNAVDAGVEWTPPATGFRVLVIDDSLVIREMMKRCLIRLGCDVTPLGSGEKAKEHLMAKGAAIDVVITDHYMGQGRCTGADLISDIRQGRLRGVSKNVPCILCSGREVKMEEFGD-NTLFMWKPFSKTDVSHALQSAV-RHSA 718          
BLAST of mRNA_S-firma_F_contig1100.1341.1 vs. uniprot
Match: D7G737_ECTSI (Histidine kinase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G737_ECTSI)

HSP 1 Score: 377 bits (968), Expect = 1.700e-116
Identity = 264/699 (37.77%), Postives = 384/699 (54.94%), Query Frame = 0
Query:    5 IGRVFCGFIAQYLGVYVSINVFSTSGGTIFWWTQSAITIAAMLLTHDRHWPERVVHVATGIAAY--VPFRYKRFSIPLLASICVSNALGQVFAYVSMKRFYPE--LSPKEVGTLRFLGVFLLFGVIFSSIVASVAGSLAFYC-FGSNVELSSVIINYLLGHVCGTLALLYPLLIVPILWKDRPAEYKSSFMYGLSVFVVVTCLCVSTNYHLFGFAAIVAVYGLFIWVSMYIHQCYASLIQLACTCSILGLTAGGRGPFVYVIK-GGGAEAVLIGTQMGETALTAVSAFIVILVSQLRALQESERESRRRTEELTERRTLDLYRIGHDMNNNSTLVHAICEV-------GGEEGDVLEIIKAVSILNSVLVSDMVDMVSGR-EARVVSKEDVDITEVMEIYSMIAKGFLFLEGKEKCITIRVEILSEENSVVYTNRERLHQVICNLVSNAVKYTESGEIVLEV---EDSSVDSCTKIRVADSGIGLSEEDVSQVFDIFFRSERASKANSGTGLGLANVRRVCEAIDAKIEVSSPGEGEGTTFTLILPRRGRDEMQI----------PKSFSLHVLVMDDSLVILRLITKYLISFGCKVVCTTSAEESR--VLLRGGDNTFDVVITDNYMG-GIESGPDFISNIRRGKVTGLHEAIPCILCSGEH---HQFNDPKTIAITKPFSSDDIAAALGLLVPEHTA 670
            +GRV  GF  Q L VY SI++F     T + WT  AIT   +  T      ER  HV +G  AY  + F Y RF   L+ S+ + NALG V      +R +P   ++P+++  L+FLG  +LF V   S+ ASV GS+AF   FG+N  L  V +NY +GH+ GT  +LYP +++P LW  +    + + + GL+  V++      T Y +F F AI+  YG  + VS  + Q  A L+       +LGLT GGRGPF  V     GA  V++ TQ+  T  T  SAF+ I  ++LR LQ  E+ S  R E++ E +T+ L ++GHDM NNST +  + E         G+    L+ I+A   ++  LV DM+D        R V + +VD+ E+ +++   AK  + + GK    T+       E +V +T+R+RLHQ++ NLV NAVKYT+SG IVL V   +DS       ++V D+GIG+  ED+ +VF   FR  R ++   G+GLGL++V  +C+ + AK++V SPG  +GTT TL LP  G D  +           P +     LV+DDSLVI  ++ + LI  GC V    S E+++   L +GG    DVVITD YMG G  +G D IS IR+G++ G+ + +PCILCSG      +F D  T+ + KPFS  D++ AL   V    A
Sbjct:   34 LGRVAGGFALQLLSVYTSISIFVKD--TSYLWTGMAITAGLLFSTPAECRLERFAHVFSGALAYYLLDFHYDRFPTGLVVSVALCNALGCVVGEHCFRRVFPRTPMTPRDIEQLKFLGALMLFPVFVGSLAASVPGSVAFRLYFGAN--LWKVFVNYTVGHISGTTVVLYPTMVLPALWSSKQ-PIQPAMVLGLAGVVLMFAF---TGYGVFAFGAILGAYGSIVTVSTQLDQWNACLMGAVAAALMLGLTVGGRGPFNSVCYFEEGARNVILSTQLATTVATGCSAFVSISSTRLRKLQTREKASLERAEKVIEAQTVQLCKVGHDMLNNSTFIWGVTESLADTLPPTGQSASQLKSIQAAITMSGTLVKDMIDSFKPEGHGRPVRRTEVDVQEMADLHVNFAKALVRMAGKSIETTLDKGTTEGEFNV-FTDRDRLHQILGNLVGNAVKYTKSGTIVLRVSRQDDSGKTGSVILQVVDTGIGIDAEDIPKVFGTLFRCARGAQLAPGSGLGLSSVLDLCKLLGAKVDVKSPGIDKGTTVTLELPI-GTDPTKTNTMDAGLEWTPPATGFRALVVDDSLVIREMMKRCLIRLGCDVTPLGSGEKAKEHFLAKGG--AIDVVITDMYMGQGQCTGADLISGIRQGRLRGVSKDVPCILCSGREVKMEEFGD-NTLFMWKPFSETDVSHALQSAVRRSAA 719          
BLAST of mRNA_S-firma_F_contig1100.1341.1 vs. uniprot
Match: UPI0016476AE8 (transporter substrate-binding domain-containing protein n=3 Tax=Pseudomonas TaxID=286 RepID=UPI0016476AE8)

HSP 1 Score: 119 bits (299), Expect = 3.810e-24
Identity = 105/338 (31.07%), Postives = 173/338 (51.18%), Query Frame = 0
Query:  291 VSQLRALQESERESRRRTEELTERRTLDLYRIGHDMNNNSTLVHAICEVGGEEGD-------VLEIIKAVSILNSVL--VSDMVDMVSGREARV-VSKEDVDITEVMEIYSMIAKGFLFLEGKEKCITIRVEILSEENSVVYTNRERLHQVICNLVSNAVKYTESGEIVLEVEDSSVDSCT----KIRVADSGIGLSEEDVSQVFDIFFRSERASKANSGTGLGLANVRRVCEAIDAKIEVSSPGEGEGTTFTLIL----------PRRGRDEMQIPKSFSLHVLVMDDSLVILRLITKYLISFGCKVVCTTSAEESRVLLR-GGDNTFDVVITDNYM 603
            +S+ + L E  R ++ + E  ++ +T  L  + H++      V  + E+  E+ D        LE+  A S  NS+L  + D++D+      ++ +S E  D+ E++E    +  G      ++K + I+++I       V  +  R  QV+ NLVSNA+K+TE G +++ ++    D+      ++RV D+GIG+  ED+ ++F  F +++    A  GTGLGL   R +CE +  ++E+ S  +G+GTT T++L          P R  +E+    S SL VLV+DD    L L++K L   G KV     AEE    LR    N FDVVITD  M
Sbjct:  697 ISERKHLLEQLRNAKEQAEAASKAKTTFLATMSHEIRTPMNAVIGMLEMALEKADQGQLDRFALEV--AFSSANSMLDLIGDILDIARIEAGKMSLSPERADVRELVESVVRVFDGV----ARQKSVRIKMQIDPGITGDVLIDPLRFKQVLSNLVSNAIKFTEQGHVLISLQGEPSDTPRELKIRLRVEDTGIGICAEDLPRLFKPFAQADSGQSARQGTGLGLVISRTLCEMMGGQLELHST-QGQGTTVTVLLSLTRLDDIVRPVRNDEELPASASRSLRVLVVDDYPANLLLLSKQLTFLGHKV---REAEEGASGLRLWQTNRFDVVITDCNM 1024          
BLAST of mRNA_S-firma_F_contig1100.1341.1 vs. uniprot
Match: A0A3Q9FVF5_9BACT (PAS domain-containing sensor histidine kinase n=2 Tax=Flammeovirga TaxID=59739 RepID=A0A3Q9FVF5_9BACT)

HSP 1 Score: 114 bits (286), Expect = 1.370e-22
Identity = 106/401 (26.43%), Postives = 201/401 (50.12%), Query Frame = 0
Query:  287 IVILVSQLRALQESERESRRRTEELTERRTLDLYRIGHDMNNNSTLVHAICEVG------GEEGDVLEIIKAVSILNSVL--VSDMVDMVSGREARVVSKEDVDITEVMEIYSMIAKGFLFLEGKEKCITIRVEILSEENSVVYTNRERLHQVICNLVSNAVKYTESGEIVLEV---EDSSVDSCTKIRVADSGIGLSEEDVSQVFDIFFRSERAS-KANSGTGLGLANVRRVCEAIDAKIEVSSPGEGEGTTFTLILPRRGRDE--------MQIPKSFSLHVLVMDDSLVILRLITKYLISFGCKVVCTTSAEESRVLLRGGDNTFDVVITDNYMGGIESGPDFISNIRRGKVTGLHEAIPCILCSGEHHQF------NDPKTIAITKPFSSDDIAAAL 661
            I++ +++ RA +E  RE++   EE    +++ L  + H++      +  +  +        ++ D L  I   S  NS+L  V+D++D  S  EA  +  E +  +   ++   I K  + L+ +EK I +++E+L     ++  +  RL Q+I NL++NAVK+T  G + L +   + +S+D+   + V D+GIGL+++  S +F  F +++ ++ +   GTGLGLA  R++   +  +I V S   G+G+TF   +      E         +I       VLV+DD+     ++ KYL +FGCK+  T S EE+  L+ G + T+D ++ D  M G++ G +    IR+  ++ +H A   ++ +    +        +  +  + KP S  D+   L
Sbjct:  360 IIMDITERRAAEEELREAKILAEEAASAKSMFLANMSHEIRTPMNAIMGLTNLALDTNLDNKQRDYLRKIYLSS--NSLLGIVNDVLDF-SKIEAGKMDIESIHFSLQDDVLENI-KNVISLKAQEKNIDLKLELLDNIPQLLKGDPLRLSQIILNLLNNAVKFTNKGGVTLRISLNQSASLDAKLLVEVIDTGIGLTQDQKSNLFQEFNQADTSTTRRYGGTGLGLAICRKLVSLMGGEIGVDSE-YGKGSTFWFSIKVGTISENSIVANQPYKIKSLIGSRVLVVDDNNESCMILEKYLDNFGCKIDITNSGEEALNLIDGNNKTYDFILMDWRMPGMD-GVETTKRIRQ--LSKIHSATDILMVTAHDKEELTQELGEEDVSGIVVKPISEQDLLDTL 752          
BLAST of mRNA_S-firma_F_contig1100.1341.1 vs. uniprot
Match: UPI001AE57237 (HAMP domain-containing histidine kinase n=1 Tax=Ammoniphilus resinae TaxID=861532 RepID=UPI001AE57237)

HSP 1 Score: 112 bits (279), Expect = 1.940e-22
Identity = 84/254 (33.07%), Postives = 143/254 (56.30%), Query Frame = 0
Query:  291 VSQLRALQESERESRRRTEELTERRTLDLYRIGHDMNNNSTLVHAICE------VGGEEG--DVLEIIKAVSILNSVLVSDMVDMVSGREARV-VSKEDVDITEVMEIYSMIAKGFLFLEGKEKCITIRVEILSEENSVVYTNRERLHQVICNLVSNAVKYTESGEIVLEVEDSSVDSCTKIRVADSGIGLSEEDVSQVFDIFFRSERA-SKANSGTGLGLANVRRVCEAIDAKIEVSSPGEGEGTTFTLILPR 534
            +++L A  ++  + R R E++   RT  +  I H++    T +    E      V GEE      +++   S+  + LV D++D+V      V + K  VD+ EV++  S   +     E  EK   +++ I  E   +V+ +++R+ Q+  NL+ NAVK+TE+GEI L+ +        ++ VAD+GIG+SE D+ ++++ FF+ +R  SKAN GTGLGL+ V+++ E  D +I V S   GEGTTF++ LP+
Sbjct:  232 INKLAAKLQTVEQDRERQEKI---RTDFIANISHELRTPLTAMQGFLEALQDGLVEGEESRQKYYQVMYQESLHLNRLVDDLMDLVKLENEEVTLYKAPVDLGEVLKKVSFTLEE----EASEKATELKLSIPEESLPMVFADKDRVVQIFKNLLKNAVKFTENGEIRLQAKSEG--DFVRVDVADTGIGISEGDLDRIWERFFKVDRGRSKANKGTGLGLSIVKKLTELHDGRISVKS-SLGEGTTFSVWLPK 475          
BLAST of mRNA_S-firma_F_contig1100.1341.1 vs. uniprot
Match: A0A2A5ARF2_9GAMM (Histidine kinase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2A5ARF2_9GAMM)

HSP 1 Score: 112 bits (281), Expect = 4.600e-22
Identity = 86/294 (29.25%), Postives = 148/294 (50.34%), Query Frame = 0
Query:  400 LEGKEKCITIRVEILSEENSVVYTNRERLHQVICNLVSNAVKYTESGEIVLE--VEDSSVDSCTKIRVADSGIGLSEEDVSQVFDIFFRSERA-SKANSGTGLGLANVRRVCEAIDAKIEVSSPGEGEGTTFTLILPRRGRDEMQ-IPKSFSLH---VLVMDDSLVILRLITKYLISFGCKVV-CTTSAEESRVLLRGGDNT----FDVVITDNYMGGI--ESGPDFISNIRRGKVTGLHEAIP--------CILCSGEHHQFNDPKTIAITKPFSSDDIAAALGLLVPEHTAV 671
            L+ ++K I + +++   E SVV  +  RL Q++ NLV NA+K+TE GE+V+   VE+          V+D+G+G+  E +S +F+ F + + + ++   GTGLGLA VR++C  +   ++V+S G G+G  F   +     D  + +  S SLH    L++DD+    R +   L  +G +VV  T+ A+  ++L     NT      +V+ D +M  +  E+   FI N  R +   L   +P        C    G H  F         KPFSSD++  A+ +++    ++
Sbjct:  450 LKAEQKGIELVLDVTDIECSVVRGDSGRLRQILTNLVGNAIKFTERGEVVIRAAVEEQRQGLLFSCYVSDTGVGIPRESISALFETFSQVDSSITRGYGGTGLGLAIVRQLCALMGGSVDVTSAGTGQGCCFEFSIQLARSDYSEPVQPSVSLHGVYFLIVDDNQASARALGNQLTRWGARVVEATSGAQTLKLLNEDAKNTPAHALPIVLVDMHMPDMDGEALAGFIKNDERFRQLSLIMMVPVDSKWDRDCFAEIGFHGFF--------LKPFSSDELCCAISMVLDSRESI 735          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1100.1341.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q8QNA2_ESV1K1.260e-28063.21EsV-1-186 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
D8LPK5_ECTSI3.140e-26659.91Histidine kinase-like protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPI3_9PHAE8.930e-22554.83MASE1 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7G325_ECTSI1.280e-14560.51Histidine kinase-like protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JSS5_9PHAE4.070e-11737.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G737_ECTSI1.700e-11637.77Histidine kinase-like protein n=1 Tax=Ectocarpus s... [more]
UPI0016476AE83.810e-2431.07transporter substrate-binding domain-containing pr... [more]
A0A3Q9FVF5_9BACT1.370e-2226.43PAS domain-containing sensor histidine kinase n=2 ... [more]
UPI001AE572371.940e-2233.07HAMP domain-containing histidine kinase n=1 Tax=Am... [more]
A0A2A5ARF2_9GAMM4.600e-2229.25Histidine kinase n=1 Tax=Gammaproteobacteria bacte... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 294..314
NoneNo IPR availableGENE3D3.40.50.2300coord: 546..669
e-value: 3.3E-13
score: 51.6
NoneNo IPR availablePANTHERPTHR43047:SF30PHOSPHOTRANSFERASE RCSDcoord: 293..601
NoneNo IPR availablePANTHERPTHR43047TWO-COMPONENT HISTIDINE PROTEIN KINASEcoord: 293..601
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 298..671
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 178..188
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 260..278
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 98..116
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 153..177
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 213..230
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 237..259
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 231..236
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 142..152
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 279..297
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..32
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 189..207
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 51..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..97
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..50
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..141
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 208..212
NoneNo IPR availableTMHMMTMhelixcoord: 189..211
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 76..98
NoneNo IPR availableTMHMMTMhelixcoord: 118..140
NoneNo IPR availableTMHMMTMhelixcoord: 216..238
NoneNo IPR availableTMHMMTMhelixcoord: 152..174
IPR004358Signal transduction histidine kinase-related protein, C-terminalPRINTSPR00344BCTRLSENSORcoord: 461..475
score: 36.16
coord: 479..489
score: 26.23
coord: 520..533
score: 39.83
coord: 495..513
score: 39.19
IPR003594Histidine kinase/HSP90-like ATPaseSMARTSM00387HKATPase_4coord: 423..536
e-value: 3.8E-34
score: 129.4
IPR003594Histidine kinase/HSP90-like ATPasePFAMPF02518HATPase_ccoord: 425..534
e-value: 4.2E-22
score: 78.8
IPR001789Signal transduction response regulator, receiver domainSMARTSM00448REC_2coord: 548..661
e-value: 1.8E-9
score: 47.4
IPR001789Signal transduction response regulator, receiver domainPFAMPF00072Response_regcoord: 550..640
e-value: 3.1E-8
score: 33.8
IPR001789Signal transduction response regulator, receiver domainPROSITEPS50110RESPONSE_REGULATORYcoord: 549..665
score: 20.728
IPR007895MASE1PFAMPF05231MASE1coord: 9..294
e-value: 1.9E-28
score: 99.5
IPR036890Histidine kinase/HSP90-like ATPase superfamilyGENE3D3.30.565.10coord: 375..538
e-value: 1.7E-35
score: 123.9
IPR036890Histidine kinase/HSP90-like ATPase superfamilySUPERFAMILY55874ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinasecoord: 402..538
IPR005467Histidine kinase domainPROSITEPS50109HIS_KINcoord: 321..536
score: 31.651
IPR011006CheY-like superfamilySUPERFAMILY52172CheY-likecoord: 548..665

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1100contigS-firma_F_contig1100:20963..22978 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1100.1341.1mRNA_S-firma_F_contig1100.1341.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1100 20963..22978 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1100.1341.1 ID=prot_S-firma_F_contig1100.1341.1|Name=mRNA_S-firma_F_contig1100.1341.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=672bp
MFAHIGRVFCGFIAQYLGVYVSINVFSTSGGTIFWWTQSAITIAAMLLTH
DRHWPERVVHVATGIAAYVPFRYKRFSIPLLASICVSNALGQVFAYVSMK
RFYPELSPKEVGTLRFLGVFLLFGVIFSSIVASVAGSLAFYCFGSNVELS
SVIINYLLGHVCGTLALLYPLLIVPILWKDRPAEYKSSFMYGLSVFVVVT
CLCVSTNYHLFGFAAIVAVYGLFIWVSMYIHQCYASLIQLACTCSILGLT
AGGRGPFVYVIKGGGAEAVLIGTQMGETALTAVSAFIVILVSQLRALQES
ERESRRRTEELTERRTLDLYRIGHDMNNNSTLVHAICEVGGEEGDVLEII
KAVSILNSVLVSDMVDMVSGREARVVSKEDVDITEVMEIYSMIAKGFLFL
EGKEKCITIRVEILSEENSVVYTNRERLHQVICNLVSNAVKYTESGEIVL
EVEDSSVDSCTKIRVADSGIGLSEEDVSQVFDIFFRSERASKANSGTGLG
LANVRRVCEAIDAKIEVSSPGEGEGTTFTLILPRRGRDEMQIPKSFSLHV
LVMDDSLVILRLITKYLISFGCKVVCTTSAEESRVLLRGGDNTFDVVITD
NYMGGIESGPDFISNIRRGKVTGLHEAIPCILCSGEHHQFNDPKTIAITK
PFSSDDIAAALGLLVPEHTAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011006CheY-like_superfamily
IPR005467His_kinase_dom
IPR036890HATPase_C_sf
IPR007895MASE1
IPR001789Sig_transdc_resp-reg_receiver
IPR003594HATPase_C
IPR004358Sig_transdc_His_kin-like_C