mRNA_S-firma_F_contig1100.1341.1 (mRNA) Sphaerotrichia firma ET2_F female
|
Overview
Homology
BLAST of mRNA_S-firma_F_contig1100.1341.1 vs. uniprot
Match: Q8QNA2_ESV1K (EsV-1-186 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNA2_ESV1K) HSP 1 Score: 793 bits (2047), Expect = 1.260e-280 Identity = 421/666 (63.21%), Postives = 525/666 (78.83%), Query Frame = 1
Query: 13 IGRVFCGFIAQYLGVYVSINVFSTSGGTIFWWTQSAITIAAMLLTHDRHWPERVVHVATGIAAYVPFRYKRFSIPLLASICVSNALGQVFAYVSMKRFYPELSPKEVGTLRFLGVFLLFGVIFSSIVASVAGSLAFYCFGSNVELSSVIINYLLGHVCGTLALLYPLLIVPILWKDRPAEYKSSFMYGLSVFVVVTCLCVSTNYHLFGFAAIVAVYGLFIWVSMYIHQCYASLIQLACTCSILGLTAGGRGPFVYVIKGGGAEAVLIGTQMGETALTAVSAFIVILVSQLRALQESERESRRRTEELTERRTLDLYRIGHDMNNNSTLVHAICEVGGEEGD--VLEIIKAVSILNSVLVSDMVDMVSGREA-RVVSKEDVDITEVMEIYSMIAKGFLFLEGKEKCITIRVEILSE-ENSVVYTNRERLHQVICNLVSNAVKYTESGEIVLEVEDSSVDSCTKIRVADSGIGLSEEDVSQVFDIFFRSERASKANSGTGLGLANVRRVCEAIDAKIEVSSPGEGEGTTFTLILPRRGRDEMQIPKS----FSLHVLVMDDSLVILRLITKYLISFGCKVVCTTSAEESRVLL-RGGDNTFDVVITDNYMGGIESGPDFISNIRRGKVTGLHEAIPCILCSGEHHQFNDPKTIAITKPFSSDDIAAAL 1983
+GR+ GFIAQY+GV VS+ VF + GGTIFWWTQ+AI IAAML T D HWPERV H+A+ + Y+PFR+++F +PLL +IC SNALGQ F YVSMK FYP LSPKEVGTLRFL +F+ F VI +SIVAS+ GSLAFY G++VELSSV++NY LGH+ GT+ LLYPLLIVP LWK+RP ++ + G+SVF+ +T +C ++YHLFGFA+IV +Y L + VS YI Q ASL+QLACT SILG TA GRGPFV+V+K G AE VLIGTQMG AL+A++AF+VILVSQLR LQ+SER SR + EL ER+TLDLYRIGHDM NN+TL+ AICEVG +GD +LE +K+V+IL +VLVSDMVDMV+G++ R V KEDVDITE++ +YSM+ G L LE K+K IT+ V I E EN YTNRERLHQ++CNLVSNAVKYT+ G+IVL SS +S +IRV DSG+GLSE DV +VFD+FFRSERAS+ NSGTGLGL+NVR++C+AIDAKIEVSSPGEG+G+TFTL+LPRR R + P+ FS +L MDDS++ILRL++KYL SFGC+VV SAEESR LL + FD+VITD+ MG E+G DFI+++R+G V GL +PCILCSGE H+F DP+T++I KPFS+ DIA AL
Sbjct: 5 VGRILGGFIAQYIGVLVSMEVFVSPGGTIFWWTQTAIAIAAMLHTSDTHWPERVGHIASSMLTYIPFRFRKFPVPLLLAICASNALGQFFGYVSMKHFYPVLSPKEVGTLRFLAIFVAFPVIIASIVASIPGSLAFYFLGTDVELSSVVVNYTLGHISGTITLLYPLLIVPTLWKNRPRS-PNTLVCGISVFLGITSMCPFSDYHLFGFASIVGMYALLVGVSAYIDQFQASLVQLACTGSILGFTAAGRGPFVHVMKDGEAEEVLIGTQMGIAALSALNAFVVILVSQLRDLQKSERISRCQAAELAERQTLDLYRIGHDMKNNATLIQAICEVGETDGDNRILETVKSVNILGNVLVSDMVDMVNGKQVHRAVPKEDVDITELLNVYSMVGTGLLLLEEKDKDITVGVRIDDESENFGAYTNRERLHQIMCNLVSNAVKYTQCGKIVLSAGCSS-ESTVEIRVTDSGVGLSEADVCKVFDLFFRSERASQINSGTGLGLSNVRKICDAIDAKIEVSSPGEGKGSTFTLVLPRRRRSTVSSPRQISTQFSFRILAMDDSILILRLLSKYLTSFGCEVVNACSAEESRALLGQPNQEKFDMVITDSSMGD-ETGIDFINSLRKGAVRGLPSDLPCILCSGEGHEFGDPRTLSIIKPFSAADIAEAL 667
BLAST of mRNA_S-firma_F_contig1100.1341.1 vs. uniprot
Match: D8LPK5_ECTSI (Histidine kinase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPK5_ECTSI) HSP 1 Score: 756 bits (1952), Expect = 3.140e-266 Identity = 402/671 (59.91%), Postives = 513/671 (76.45%), Query Frame = 1
Query: 1 MFAHIGRVFCGFIAQYLGVYVSINVFSTSGGTIFWWTQSAITIAAMLLTHDRHWPERVVHVATGIAAYVPFRYKRFSIPLLASICVSNALGQVFAYVSMKRFYPELSPKEVGTLRFLGVFLLFGVIFSSIVASVAGSLAFYCFGSNVELSSVIINYLLGHVCGTLALLYPLLIVPILWKDRPAEYKSSFMYGLSVFVVVTCLCVSTNYHLFGFAAIVAVYGLFIWVSMYIHQCYASLIQLACTCSILGLTAGGRGPFVYVIKGGGAEAVLIGTQMGETALTAVSAFIVILVSQLRALQESERESRRRTEELTERRTLDLYRIGHDMNNNSTLVHAICEVGGEEGD--VLEIIKAVSILNSVLVSDMVDMVSGREA-RVVSKEDVDITEVMEIYSMIAKGFLFLEGKEKCITIRVEILSEENSVVYTNRERLHQVICNLVSNAVKYTESGEIVLEVEDSSVDSCTKIRVADSGIGLSEEDVSQVFDIFFRSERASKANSGTGLGLANVRRVCEAIDAKIEVSSPGEGEGTTFTLILPRRGRDEMQIPKS----FSLHVLVMDDSLVILRLITKYLISFGCKVVCTTSAEESRVLL-RGGDNTFDVVITDNYMGGIESGPDFISNIRRGKVTGLHEAIPCILCSGEHHQFNDPKTIAITKPFSSDDIAAALGL 1989
MFA +GR+ GFIAQY+GV VSI VF++ GGTIFWWTQ+AI IAAML T D HWPERV H+A+ Y+PFR+++F +PLL +IC SN++GQ F YVSMK F+P LS KEVGTL+FL +F+ F V+ +SIVAS+ GSLAFY G++V+L SV +NY LGH+ GT+ALLYPLLIVP LWK R + ++ + G S F +T +C +NYHL GFA+IV +YGL + VS I Q +ASL+QLAC SILGLTA GRGPFV+ +K + VLIGTQMG AL+A++AF+VILVSQLR LQ E+ SR + EEL ER+TLDLYRIGHDM NN+TL+ A+CEVG +GD +LE +K+V+IL +VLVSDMVDMV+G +A RVV KEDVDI E++ +YSM+ G L LEGK+K IT+ V I E VY N+ERLHQ++CN++SN+VKYT+SG IVLE S +S +IRV DSGIG+SE DV +VFD+FFRS AS+ NSGTGLGL+NVR++C +I AKI+VSSPGEG+G+TFTL+ PR R + P+ FS H+L MDDS++I L++KYL SFGC VV SAEESR LL + FD+VITD++MG E+G DFI+++RRG V GL +PCILCSG+ H+F+DP+TI+ITKPFSS DIA AL +
Sbjct: 1 MFACLGRILGGFIAQYIGVLVSIKVFASPGGTIFWWTQTAIAIAAMLHTPDPHWPERVGHIASSTLTYIPFRFRKFPVPLLFAICASNSMGQFFGYVSMKHFFPVLSQKEVGTLKFLAIFVAFPVVIASIVASIPGSLAFYFLGTDVDLFSVAVNYTLGHMSGTIALLYPLLIVPALWKTR-SRSPNTLVCGTSAFFGITSMCAFSNYHLLGFASIVVMYGLLVGVSACIDQFHASLVQLACMGSILGLTAAGRGPFVHAVKDRETDEVLIGTQMGIAALSALNAFVVILVSQLRDLQTFEKISRCQAEELAERQTLDLYRIGHDMKNNATLIQALCEVGETDGDNSILETVKSVNILGNVLVSDMVDMVNGSKAHRVVPKEDVDIKELLNVYSMVGTGMLLLEGKDKDITMGVRIADGEKLEVYINKERLHQIMCNILSNSVKYTQSGTIVLEAGCCS-ESTVEIRVTDSGIGMSEADVCKVFDLFFRSGPASQINSGTGLGLSNVRKICNSIGAKIDVSSPGEGQGSTFTLVFPRTRRSIVSSPRQISTQFSFHILAMDDSVLIRGLMSKYLTSFGCDVVSACSAEESRALLGQPNQEKFDIVITDSFMGD-ETGIDFINSLRRGAVRGLSSDLPCILCSGDIHEFDDPRTISITKPFSSADIADALNI 668
BLAST of mRNA_S-firma_F_contig1100.1341.1 vs. uniprot
Match: A0A6H5JPI3_9PHAE (MASE1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPI3_9PHAE) HSP 1 Score: 648 bits (1672), Expect = 8.930e-225 Identity = 369/673 (54.83%), Postives = 466/673 (69.24%), Query Frame = 1
Query: 1 MFAHIGRVFCGFIAQYLGVYVSINVFSTSGGTIFWWTQSAITIAAMLLTHDRHWPERVVHVATGIAAYVPFRYKRFSIPLLASICVSNALGQVFAYVSMKRFYPELSPKEVGTLRFLGVFLLFGVIFSSIVASVAGSLAFYCFGSNVELSSVIINYLLGHVCGTLALLYPLLIVPILWKDRPAEYKSSFMYGLSVFVVVTCLCVSTNYHLFGFAAIVAV-YGLFIWVSMYIHQCYASLIQLACTCSILGLTAGGRGPFVYVIKGGGAEAVLIG-TQMGETALTAVSAFIVILVSQLRALQESERESRRRTEELTERRTLDLYRIGHDMNNNSTLVHAICEVGGEEGD--VLEIIKAVSILNSVLVSDMVDMVSGREA-RVVSKEDVDITEVMEIYSMIAKGFLFLEGKEKCITIRVEILSE-ENSVVYTNRERLHQVICNLVSNAVKYTESGEIVLEVEDSSVDSCTKIRVADSGIGLSEEDVSQVFDIFFRSERASKANSGTGLGLANVRRVCEAIDAKIEVSSPGEGEGTTFTLILPRRGRD----EMQIPKSFSLHVLVMDDSLVILRLITKYLISFGCKVVCTTSAEESRVLLRGGDNTFDVVITDNYMGGIESGPDFISNIRRGKVTGLHEAIPCILCSGEHHQFNDPKTIAITKPFSSDDIAAALGL 1989
MF +GR+ GFIAQY+GV SI VF++ GGTIF WTQ+AI IAAML T D HWPERV H+A+ Y+PFR+++F +PLL ++C SN+LGQ+F YVSMK FYP LS +EVGTLRFL +F+ F VI +SIVAS+ GSLAFY G++VELSSV++NY LGH+ GT+ LLYPLLIVP LWK RP ++ + G+S F+ +T +C +NYHL G A+IV + Y L I VS Y+ Q ASL+QLA T SILG TA GRGPFV+V KGG AE VLIG TQMG AL+A++AF+VILVSQLR LQ+ ER SR + EEL ER+TLDLYRIGHDM NN+TL+ ICEVG + D +LE +K+V+IL +VLVSDMVDMV+G++ RVV KEDVDI E++ +YSM+ G L LEGK+K IT+ V I + EN TNRERLH+++CNL+SNAV +GIGLSE DV +VFD+FFRS RAS+ NSGTGL EVSSPGEG+G+TFTL LPR+ R + Q+ FS VL MDDS++ILR ++KYL S GC+ FDVVITD+++G E+G DF ++RRG V GL +P ILCSG+ H+ DP+T++ITKPFS DI AL +
Sbjct: 1 MFPCVGRILGGFIAQYIGVLASIRVFASPGGTIFSWTQTAIAIAAMLHTPDTHWPERVGHIASSTLPYIPFRFRKFPVPLLLAVCASNSLGQLFGYVSMKHFYPVLSSEEVGTLRFLAIFVAFPVIIASIVASIPGSLAFYFLGTDVELSSVVVNYTLGHISGTITLLYPLLIVPTLWKTRPRS-PNALVCGISAFLGITSMCPVSNYHLLGLASIVGIMYALLIGVSAYVDQFQASLVQLAFTGSILGFTAAGRGPFVHVTKGGEAEEVLIGSTQMGIAALSALNAFVVILVSQLRDLQKFERISRCQAEELAERQTLDLYRIGHDMKNNATLIQTICEVGETDADNRILETVKSVNILGNVLVSDMVDMVNGKQVHRVVPKEDVDIAELLNVYSMVGTGLLLLEGKDKDITVGVRIDDDGENFGAQTNRERLHKIVCNLLSNAV---------------------------NGIGLSEADVCKVFDLFFRSGRASQINSGTGL----------------EVSSPGEGKGSTFTLFLPRKRRSIVSRQKQVSTRFSFRVLAMDDSVLILRPLSKYLSSLGCE--------------------FDVVITDSFIGD-ETGIDFFCSVRRGGVMGLPRDLPSILCSGDSHESGDPRTLSITKPFSVADICHALNI 608
BLAST of mRNA_S-firma_F_contig1100.1341.1 vs. uniprot
Match: D7G325_ECTSI (Histidine kinase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G325_ECTSI) HSP 1 Score: 438 bits (1127), Expect = 1.280e-145 Identity = 239/395 (60.51%), Postives = 301/395 (76.20%), Query Frame = 1
Query: 823 MGETALTAVSAFIVILVSQLRALQESERESRRRTEELTERRTLDLYRIGHDMNNNSTLVHAICEVGGEEGDVLEIIKAVSILNSVLVSDMVDMVSGREA-RVVSKEDVDITEVMEIYSMIAKGFLFLEGKEKCITIRVEILSEENSVVYTNRERLHQVICNLVSNAVKYTESGEIVLEVEDSSVDSCTKIRVADSGIGLSEEDVSQVFDIFFRSERASKANSGTGLGLANVRRVCEAIDAKIEVSSPGEGEGTTFTLILPRRGRDEM----QIPKSFSLHVLVMDDSLVILRLITKYLISFGCKVVCTTSAEESRVLL-RGGDNTFDVVITDNYMGGIESGPDFISNIRRGKVTGLHEAIPCILCSGEHHQFNDPKTIAITKPFSSDDIAAALGL 1989
MG AL A++AF+VILVS LR LQ ER SR + EEL ER+TLDLYRIGHDM NN+TL+ A+CEV + +LE +K+++IL +VLVSDMVDMV+G++A RVV KEDVD+TE++ +YSM+ G L LEGK+K +T+ V I E VYTNRERLHQ++CNL+SNAVKYT++G+IVL V ++ +IRV DSGIGL E DV +VFD+FFRS RAS+ +SGTGLGL+NVR +C+AI AKI VSSPGEG+G TFTL+LPRR R QI FS VL MDDS+VILRL++KY SFGC+VV SAEESR LL + FDVVITD++MG E+G D I ++RRG V GL +PCILCSG+ H+F+DP+T++ITKPFSS DIA AL +
Sbjct: 1 MGIAALLALNAFVVILVSLLRDLQTFERISRCQAEELAERQTLDLYRIGHDMKNNATLIQAVCEVPDADNRILETVKSINILGNVLVSDMVDMVNGKQAHRVVPKEDVDVTELLNVYSMVGTGMLLLEGKDKDVTVGVRIAGSEKFEVYTNRERLHQIMCNLLSNAVKYTQTGKIVL-VAGCCSENTVEIRVVDSGIGLCEADVCRVFDLFFRSRRASQISSGTGLGLSNVRNICDAIGAKIGVSSPGEGKGCTFTLVLPRRRRSIFSGHGQISMQFSFRVLAMDDSIVILRLLSKYFTSFGCEVVNACSAEESRALLGQPNQEKFDVVITDSFMGD-ETGIDVIHSLRRGAVRGLPSDLPCILCSGDSHEFDDPRTVSITKPFSSADIADALNI 393
BLAST of mRNA_S-firma_F_contig1100.1341.1 vs. uniprot
Match: A0A6H5JSS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSS5_9PHAE) HSP 1 Score: 379 bits (972), Expect = 4.070e-117 Identity = 258/697 (37.02%), Postives = 388/697 (55.67%), Query Frame = 1
Query: 13 IGRVFCGFIAQYLGVYVSINVFSTSGGTIFWWTQSAITIAAMLLTHDRHWPERVVHVATGIAAY--VPFRYKRFSIPLLASICVSNALGQVFAYVSMKRFYPE--LSPKEVGTLRFLGVFLLFGVIFSSIVASVAGSLAFYC-FGSNVELSSVIINYLLGHVCGTLALLYPLLIVPILWKDRPAEYKSSFMYGLSVFVVVTCLCVSTNYHLFGFAAIVAVYGLFIWVSMYIHQCYASLIQLACTCSILGLTAGGRGPFVYVIK-GGGAEAVLIGTQMGETALTAVSAFIVILVSQLRALQESERESRRRTEELTERRTLDLYRIGHDMNNNSTLVHAICEV-------GGEEGDVLEIIKAVSILNSVLVSDMVDMVSGR-EARVVSKEDVDITEVMEIYSMIAKGFLFLEGKEKCITIRVEILSEENSVVYTNRERLHQVICNLVSNAVKYTESGEIVLEV---EDSSVDSCTKIRVADSGIGLSEEDVSQVFDIFFRSERASKANSGTGLGLANVRRVCEAIDAKIEVSSPGEGEGTTFTLILPRRGRDEMQI----------PKSFSLHVLVMDDSLVILRLITKYLISFGCKVVCTTSAEESRVLLRGGDNTFDVVITDNYMG-GIESGPDFISNIRRGKVTGLHEAIPCILCSGEH---HQFNDPKTIAITKPFSSDDIAAALGLLVPEHTA 2010
+ RV GF Q L VY SI+VF T + WT AIT + T ER HV +G AY + F Y+RF L+ ++ + NALG V +R +P + P+++ L+FLG +LF V S+ ASV GS+AF FG+N L V +NY +GH+ GT +LYP +++P LW + +++ + GL+ V++ T+Y +F F AI+ YG + VS + Q A L+ +LGLT GGRGPF V GA V++ TQ+ T T SAF+ I ++LR LQ E+ S R E++ E +T+ L ++ HDM NN+T + + E G+ L++I+A +N LV DM D R + + +VD+ E+ E++ AK + + G+ T+ + +E V+T+R+RLHQ++ NLV NAVKYT+SG IVL V +D+ ++V D+GIG+ ED+ ++F FR R ++ G+GLGL++V +C+ ++AK+++ SPG +GTT TL LP G D + P + VLV+DDSLVI ++ + LI GC V S E+++ L DVVITD+YMG G +G D IS+IR+G++ G+ + +PCILCSG +F D T+ + KPFS D++ AL V H+A
Sbjct: 34 LARVAAGFALQLLSVYTSISVFVKD--TSYLWTGMAITAGLLFNTPAECRLERFAHVFSGALAYYLLDFHYERFPTGLVVAVALCNALGCVVGEHCFRRVFPRTPMIPRDIEQLKFLGALMLFPVFAGSLAASVPGSVAFRLYFGAN--LWKVFVNYTVGHISGTTVVLYPTMVLPALWSSKQ-PIQAAMVLGLAGVVLMFAF---TDYGVFAFGAILGAYGSIVTVSTQLDQWNACLMGAVAAALMLGLTMGGRGPFNSVCYFEEGARNVILSTQLATTVATGCSAFVSISSTRLRKLQAREKASLERAEKMIETQTVQLCKVAHDMLNNTTFIWGVTESLADTLPPTGQSASQLKMIQAAITMNGTLVKDMTDSFKPEGHGRPIRRTEVDVQEMAELHVNFAKALVRMAGRSIETTLDLGT-AEGEFKVFTDRDRLHQILSNLVGNAVKYTKSGTIVLRVSRQDDAGTTGSVILQVIDTGIGIDAEDIPKIFGTLFRCARGAQLAPGSGLGLSSVLDMCKLLEAKVDLQSPGVDKGTTVTLELPI-GTDPTKTNAVDAGVEWTPPATGFRVLVIDDSLVIREMMKRCLIRLGCDVTPLGSGEKAKEHLMAKGAAIDVVITDHYMGQGRCTGADLISDIRQGRLRGVSKNVPCILCSGREVKMEEFGD-NTLFMWKPFSKTDVSHALQSAV-RHSA 718
BLAST of mRNA_S-firma_F_contig1100.1341.1 vs. uniprot
Match: D7G737_ECTSI (Histidine kinase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G737_ECTSI) HSP 1 Score: 377 bits (968), Expect = 1.700e-116 Identity = 264/699 (37.77%), Postives = 384/699 (54.94%), Query Frame = 1
Query: 13 IGRVFCGFIAQYLGVYVSINVFSTSGGTIFWWTQSAITIAAMLLTHDRHWPERVVHVATGIAAY--VPFRYKRFSIPLLASICVSNALGQVFAYVSMKRFYPE--LSPKEVGTLRFLGVFLLFGVIFSSIVASVAGSLAFYC-FGSNVELSSVIINYLLGHVCGTLALLYPLLIVPILWKDRPAEYKSSFMYGLSVFVVVTCLCVSTNYHLFGFAAIVAVYGLFIWVSMYIHQCYASLIQLACTCSILGLTAGGRGPFVYVIK-GGGAEAVLIGTQMGETALTAVSAFIVILVSQLRALQESERESRRRTEELTERRTLDLYRIGHDMNNNSTLVHAICEV-------GGEEGDVLEIIKAVSILNSVLVSDMVDMVSGR-EARVVSKEDVDITEVMEIYSMIAKGFLFLEGKEKCITIRVEILSEENSVVYTNRERLHQVICNLVSNAVKYTESGEIVLEV---EDSSVDSCTKIRVADSGIGLSEEDVSQVFDIFFRSERASKANSGTGLGLANVRRVCEAIDAKIEVSSPGEGEGTTFTLILPRRGRDEMQI----------PKSFSLHVLVMDDSLVILRLITKYLISFGCKVVCTTSAEESR--VLLRGGDNTFDVVITDNYMG-GIESGPDFISNIRRGKVTGLHEAIPCILCSGEH---HQFNDPKTIAITKPFSSDDIAAALGLLVPEHTA 2010
+GRV GF Q L VY SI++F T + WT AIT + T ER HV +G AY + F Y RF L+ S+ + NALG V +R +P ++P+++ L+FLG +LF V S+ ASV GS+AF FG+N L V +NY +GH+ GT +LYP +++P LW + + + + GL+ V++ T Y +F F AI+ YG + VS + Q A L+ +LGLT GGRGPF V GA V++ TQ+ T T SAF+ I ++LR LQ E+ S R E++ E +T+ L ++GHDM NNST + + E G+ L+ I+A ++ LV DM+D R V + +VD+ E+ +++ AK + + GK T+ E +V +T+R+RLHQ++ NLV NAVKYT+SG IVL V +DS ++V D+GIG+ ED+ +VF FR R ++ G+GLGL++V +C+ + AK++V SPG +GTT TL LP G D + P + LV+DDSLVI ++ + LI GC V S E+++ L +GG DVVITD YMG G +G D IS IR+G++ G+ + +PCILCSG +F D T+ + KPFS D++ AL V A
Sbjct: 34 LGRVAGGFALQLLSVYTSISIFVKD--TSYLWTGMAITAGLLFSTPAECRLERFAHVFSGALAYYLLDFHYDRFPTGLVVSVALCNALGCVVGEHCFRRVFPRTPMTPRDIEQLKFLGALMLFPVFVGSLAASVPGSVAFRLYFGAN--LWKVFVNYTVGHISGTTVVLYPTMVLPALWSSKQ-PIQPAMVLGLAGVVLMFAF---TGYGVFAFGAILGAYGSIVTVSTQLDQWNACLMGAVAAALMLGLTVGGRGPFNSVCYFEEGARNVILSTQLATTVATGCSAFVSISSTRLRKLQTREKASLERAEKVIEAQTVQLCKVGHDMLNNSTFIWGVTESLADTLPPTGQSASQLKSIQAAITMSGTLVKDMIDSFKPEGHGRPVRRTEVDVQEMADLHVNFAKALVRMAGKSIETTLDKGTTEGEFNV-FTDRDRLHQILGNLVGNAVKYTKSGTIVLRVSRQDDSGKTGSVILQVVDTGIGIDAEDIPKVFGTLFRCARGAQLAPGSGLGLSSVLDLCKLLGAKVDVKSPGIDKGTTVTLELPI-GTDPTKTNTMDAGLEWTPPATGFRALVVDDSLVIREMMKRCLIRLGCDVTPLGSGEKAKEHFLAKGG--AIDVVITDMYMGQGQCTGADLISGIRQGRLRGVSKDVPCILCSGREVKMEEFGD-NTLFMWKPFSETDVSHALQSAVRRSAA 719
BLAST of mRNA_S-firma_F_contig1100.1341.1 vs. uniprot
Match: UPI0016476AE8 (transporter substrate-binding domain-containing protein n=3 Tax=Pseudomonas TaxID=286 RepID=UPI0016476AE8) HSP 1 Score: 119 bits (299), Expect = 3.810e-24 Identity = 105/338 (31.07%), Postives = 173/338 (51.18%), Query Frame = 1
Query: 871 VSQLRALQESERESRRRTEELTERRTLDLYRIGHDMNNNSTLVHAICEVGGEEGD-------VLEIIKAVSILNSVL--VSDMVDMVSGREARV-VSKEDVDITEVMEIYSMIAKGFLFLEGKEKCITIRVEILSEENSVVYTNRERLHQVICNLVSNAVKYTESGEIVLEVEDSSVDSCT----KIRVADSGIGLSEEDVSQVFDIFFRSERASKANSGTGLGLANVRRVCEAIDAKIEVSSPGEGEGTTFTLIL----------PRRGRDEMQIPKSFSLHVLVMDDSLVILRLITKYLISFGCKVVCTTSAEESRVLLR-GGDNTFDVVITDNYM 1809
+S+ + L E R ++ + E ++ +T L + H++ V + E+ E+ D LE+ A S NS+L + D++D+ ++ +S E D+ E++E + G ++K + I+++I V + R QV+ NLVSNA+K+TE G +++ ++ D+ ++RV D+GIG+ ED+ ++F F +++ A GTGLGL R +CE + ++E+ S +G+GTT T++L P R +E+ S SL VLV+DD L L++K L G KV AEE LR N FDVVITD M
Sbjct: 697 ISERKHLLEQLRNAKEQAEAASKAKTTFLATMSHEIRTPMNAVIGMLEMALEKADQGQLDRFALEV--AFSSANSMLDLIGDILDIARIEAGKMSLSPERADVRELVESVVRVFDGV----ARQKSVRIKMQIDPGITGDVLIDPLRFKQVLSNLVSNAIKFTEQGHVLISLQGEPSDTPRELKIRLRVEDTGIGICAEDLPRLFKPFAQADSGQSARQGTGLGLVISRTLCEMMGGQLELHST-QGQGTTVTVLLSLTRLDDIVRPVRNDEELPASASRSLRVLVVDDYPANLLLLSKQLTFLGHKV---REAEEGASGLRLWQTNRFDVVITDCNM 1024
BLAST of mRNA_S-firma_F_contig1100.1341.1 vs. uniprot
Match: A0A848U9M2_9GAMM (Histidine kinase n=1 Tax=Granulosicoccus sp. TaxID=1943584 RepID=A0A848U9M2_9GAMM) HSP 1 Score: 116 bits (290), Expect = 1.850e-23 Identity = 86/279 (30.82%), Postives = 150/279 (53.76%), Query Frame = 1
Query: 1201 EGKEKCITIRVEILSEENSVVYTNRERLHQVICNLVSNAVKYTESGEIVLEVEDSSVDSCTKIRVADSGIGLSEEDVSQVFDIFFRSERASKANS-GTGLGLANVRRVCEAIDAKIEVSSPGEGEGTTFTLILPRRGRDEMQIP---------KSFSLHVLVMDDSLVILRLITKYLISFGCKVVCTTSAEESRVLLRGGDNTFDVVITDNYMGGIESGPDFISNIRRGKVTGLHEAIPCILCSGEHH-----QFNDPKTIAITKPFSSDDIAAALGLL 1992
+ +EK +T++V+ + V++T+ L +V+ NL+SNAV+YT SG I+L D VD + + D+G+G+ EE V VF +++ + S G GLGLA V+R+CE +D +E+ S EG+GT F LI+P G D QI ++ VLV+DD + +L+ + L ++GCKV+ SA ++ ++ + +V+++D + +G D ++ IR + IP I+ +G+ + + + KP S D++ A+ L
Sbjct: 305 QTEEKNLTLQVDA---QEHVLFTDAILLERVLRNLLSNAVQYTTSGTIILRCADH-VDGSKLVTLQDTGMGIPEEAVEDVFSEYYQLNNPERDRSQGLGLGLAIVKRLCELMDLPLEMESV-EGQGTVFRLIVP--GGDPAQIAHEPGPELPLQAAGRRVLVIDDEMQVLQSMRHMLENWGCKVLLAESARDALKVIALTEEIPEVILSDYRLRDNHNGVDAVAAIRES----VEHDIPAIVITGDTSPERLKEVSGTGLSVMHKPVSPDELQRAIHAL 572
BLAST of mRNA_S-firma_F_contig1100.1341.1 vs. uniprot
Match: A0A3Q9FVF5_9BACT (PAS domain-containing sensor histidine kinase n=2 Tax=Flammeovirga TaxID=59739 RepID=A0A3Q9FVF5_9BACT) HSP 1 Score: 114 bits (286), Expect = 1.370e-22 Identity = 106/401 (26.43%), Postives = 201/401 (50.12%), Query Frame = 1
Query: 859 IVILVSQLRALQESERESRRRTEELTERRTLDLYRIGHDMNNNSTLVHAICEVG------GEEGDVLEIIKAVSILNSVL--VSDMVDMVSGREARVVSKEDVDITEVMEIYSMIAKGFLFLEGKEKCITIRVEILSEENSVVYTNRERLHQVICNLVSNAVKYTESGEIVLEV---EDSSVDSCTKIRVADSGIGLSEEDVSQVFDIFFRSERAS-KANSGTGLGLANVRRVCEAIDAKIEVSSPGEGEGTTFTLILPRRGRDE--------MQIPKSFSLHVLVMDDSLVILRLITKYLISFGCKVVCTTSAEESRVLLRGGDNTFDVVITDNYMGGIESGPDFISNIRRGKVTGLHEAIPCILCSGEHHQF------NDPKTIAITKPFSSDDIAAAL 1983
I++ +++ RA +E RE++ EE +++ L + H++ + + + ++ D L I S NS+L V+D++D S EA + E + + ++ I K + L+ +EK I +++E+L ++ + RL Q+I NL++NAVK+T G + L + + +S+D+ + V D+GIGL+++ S +F F +++ ++ + GTGLGLA R++ + +I V S G+G+TF + E +I VLV+DD+ ++ KYL +FGCK+ T S EE+ L+ G + T+D ++ D M G++ G + IR+ ++ +H A ++ + + + + + KP S D+ L
Sbjct: 360 IIMDITERRAAEEELREAKILAEEAASAKSMFLANMSHEIRTPMNAIMGLTNLALDTNLDNKQRDYLRKIYLSS--NSLLGIVNDVLDF-SKIEAGKMDIESIHFSLQDDVLENI-KNVISLKAQEKNIDLKLELLDNIPQLLKGDPLRLSQIILNLLNNAVKFTNKGGVTLRISLNQSASLDAKLLVEVIDTGIGLTQDQKSNLFQEFNQADTSTTRRYGGTGLGLAICRKLVSLMGGEIGVDSE-YGKGSTFWFSIKVGTISENSIVANQPYKIKSLIGSRVLVVDDNNESCMILEKYLDNFGCKIDITNSGEEALNLIDGNNKTYDFILMDWRMPGMD-GVETTKRIRQ--LSKIHSATDILMVTAHDKEELTQELGEEDVSGIVVKPISEQDLLDTL 752
BLAST of mRNA_S-firma_F_contig1100.1341.1 vs. uniprot
Match: UPI001AE57237 (HAMP domain-containing histidine kinase n=1 Tax=Ammoniphilus resinae TaxID=861532 RepID=UPI001AE57237) HSP 1 Score: 112 bits (279), Expect = 1.940e-22 Identity = 84/254 (33.07%), Postives = 143/254 (56.30%), Query Frame = 1
Query: 871 VSQLRALQESERESRRRTEELTERRTLDLYRIGHDMNNNSTLVHAICE------VGGEEG--DVLEIIKAVSILNSVLVSDMVDMVSGREARV-VSKEDVDITEVMEIYSMIAKGFLFLEGKEKCITIRVEILSEENSVVYTNRERLHQVICNLVSNAVKYTESGEIVLEVEDSSVDSCTKIRVADSGIGLSEEDVSQVFDIFFRSERA-SKANSGTGLGLANVRRVCEAIDAKIEVSSPGEGEGTTFTLILPR 1602
+++L A ++ + R R E++ RT + I H++ T + E V GEE +++ S+ + LV D++D+V V + K VD+ EV++ S + E EK +++ I E +V+ +++R+ Q+ NL+ NAVK+TE+GEI L+ + ++ VAD+GIG+SE D+ ++++ FF+ +R SKAN GTGLGL+ V+++ E D +I V S GEGTTF++ LP+
Sbjct: 232 INKLAAKLQTVEQDRERQEKI---RTDFIANISHELRTPLTAMQGFLEALQDGLVEGEESRQKYYQVMYQESLHLNRLVDDLMDLVKLENEEVTLYKAPVDLGEVLKKVSFTLEE----EASEKATELKLSIPEESLPMVFADKDRVVQIFKNLLKNAVKFTENGEIRLQAKSEG--DFVRVDVADTGIGISEGDLDRIWERFFKVDRGRSKANKGTGLGLSIVKKLTELHDGRISVKS-SLGEGTTFSVWLPK 475 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1100.1341.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1100.1341.1 >prot_S-firma_F_contig1100.1341.1 ID=prot_S-firma_F_contig1100.1341.1|Name=mRNA_S-firma_F_contig1100.1341.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=672bp MFAHIGRVFCGFIAQYLGVYVSINVFSTSGGTIFWWTQSAITIAAMLLTHback to top mRNA from alignment at S-firma_F_contig1100:20963..22978- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1100.1341.1 ID=mRNA_S-firma_F_contig1100.1341.1|Name=mRNA_S-firma_F_contig1100.1341.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2016bp|location=Sequence derived from alignment at S-firma_F_contig1100:20963..22978- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1100:20963..22978- >mRNA_S-firma_F_contig1100.1341.1 ID=mRNA_S-firma_F_contig1100.1341.1|Name=mRNA_S-firma_F_contig1100.1341.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=4032bp|location=Sequence derived from alignment at S-firma_F_contig1100:20963..22978- (Sphaerotrichia firma ET2_F female)back to top |