prot_S-firma_F_contig10994.1310.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10994.1310.1
Unique Nameprot_S-firma_F_contig10994.1310.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length226
Homology
BLAST of mRNA_S-firma_F_contig10994.1310.1 vs. uniprot
Match: D8LSN8_ECTSI (WD-40 repeat family protein / mitotic checkpoint protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSN8_ECTSI)

HSP 1 Score: 362 bits (928), Expect = 5.040e-124
Identity = 168/187 (89.84%), Postives = 183/187 (97.86%), Query Frame = 0
Query:   39 PSQVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKGDKVFPVNAMAFHPIYGTFATGGCDNMVNIWDGKNKKRLWQSNAYSTGIASLAFNHDGTRLAIAASYTFEQGAIAHPKDNIYVRDVIDSDVRPKARK 225
            P +VFTMSVSD RAV+GTSNRHIWVYDMRSLAEPEQRRVSSLK+QTRCVR+FPDQ+GYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKGD+VFPVNAMAFHP+YGTFA+GGCD MVNIWDGKNKKRLWQS+AY+TGI+SL+FNHDGTRLAIA+SYTFEQGAIAHPKD I+VRDV+DSDVRPKARK
Sbjct:  104 PGKVFTMSVSDMRAVVGTSNRHIWVYDMRSLAEPEQRRVSSLKYQTRCVRIFPDQKGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKGDQVFPVNAMAFHPVYGTFASGGCDKMVNIWDGKNKKRLWQSSAYNTGISSLSFNHDGTRLAIASSYTFEQGAIAHPKDQIFVRDVMDSDVRPKARK 290          
BLAST of mRNA_S-firma_F_contig10994.1310.1 vs. uniprot
Match: A0A7S2UWG3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWG3_9STRA)

HSP 1 Score: 260 bits (664), Expect = 1.100e-83
Identity = 125/185 (67.57%), Postives = 147/185 (79.46%), Query Frame = 0
Query:   39 PSQVFTMSVSDRRAVIGTSNRHIWVYDMRSL-AEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKGDKVFPVNAMAFHPIYGTFATGGCDNMVNIWDGKNKKRLWQSNAYSTGIASLAFNHDGTRLAIAASYTFEQGAIAHPKDNIYVRDVIDSDVRPK 222
            P +VFTM++SD R V+GTS R +  YDMR L A PE +R SSLK+QTR +R F D+ GYA+GS+EGRVAVE+FD S E+Q  KYAFKCHR  D +FPVNAMAFHPI+GTFATGGCD +VN+WDG+NKKRL Q   Y TGI+SLAFNHDG+ LAIA SYTFEQG I HP+D I +R V DSDVR K
Sbjct:  117 PGKVFTMALSDNRVVVGTSGRQVVTYDMRRLTAGPETQRESSLKYQTRVIRCFNDRTGYALGSIEGRVAVEFFDPSPEAQAKKYAFKCHRTADTIFPVNAMAFHPIFGTFATGGCDGIVNVWDGQNKKRLSQFPKYQTGISSLAFNHDGSLLAIAVSYTFEQGEIEHPEDTIVIRLVSDSDVRQK 301          
BLAST of mRNA_S-firma_F_contig10994.1310.1 vs. uniprot
Match: A0A835ZK40_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK40_9STRA)

HSP 1 Score: 250 bits (638), Expect = 1.940e-79
Identity = 117/187 (62.57%), Postives = 139/187 (74.33%), Query Frame = 0
Query:   39 PSQVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKGDKVFPVNAMAFHPIYGTFATGGCDNMVNIWDGKNKKRLWQSNAYSTGIASLAFNHDGTRLAIAASYTFEQGAIAHPKDNIYVRDVIDSDVRPKARK 225
            P +V++M V+  + V+G SNR + VYD+R L  PEQ R SSLKFQTRC+++ PD  GY + SVEGRVAVEY D S E Q  KYAFKCHR+GD +FPVNAMAFHP++GTFATGGCD  VN+WDG NKKRL     Y T I+S+AFN DG  LAIA+SYTFEQG   H  D IYVR+V   DV+PK RK
Sbjct:  142 PGKVYSMDVNGSKLVVGCSNRFVVVYDLRKLDRPEQMRESSLKFQTRCIKLMPDNSGYVLSSVEGRVAVEYLDPSPEVQSKKYAFKCHRQGDTIFPVNAMAFHPVFGTFATGGCDGTVNVWDGTNKKRLINYTGYPTSISSVAFNRDGMLLAIASSYTFEQGEKDHQPDAIYVREVNPHDVKPKPRK 328          
BLAST of mRNA_S-firma_F_contig10994.1310.1 vs. uniprot
Match: A0A7S2BKC8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BKC8_9STRA)

HSP 1 Score: 249 bits (635), Expect = 3.170e-79
Identity = 117/186 (62.90%), Postives = 144/186 (77.42%), Query Frame = 0
Query:   39 PSQVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKGDKVFPVNAMAFHPIYGTFATGGCDNMVNIWDGKNKKRLWQSNAYSTGIASLAFNHDGTRLAIAASYTFEQGAIAHPKDNIYVRDVIDSDVRPKAR 224
            P +VF+MSV+D R V+ T++R +  YD+R L  PE  R SSLK+QTRCVR FPD +GYA+ S+EGRVA+EYF    E++  KYAFKCHR    VFPVN++AFHP++GTFATGGCD  VNIWDGKNKKRL Q  ++ T IASL+FNHDGT LA+AASYTFE+G   HP D +Y+R + DSDVRPK R
Sbjct:  125 PGKVFSMSVTDSRLVVATADRRVVSYDLRMLDAPEFDRESSLKYQTRCVRTFPDGQGYALASIEGRVAIEYFSADDEAK--KYAFKCHRVQQTVFPVNSIAFHPLHGTFATGGCDGFVNIWDGKNKKRLCQLPSFPTSIASLSFNHDGTMLAVAASYTFEEGEKDHPPDQLYIRMISDSDVRPKPR 308          
BLAST of mRNA_S-firma_F_contig10994.1310.1 vs. uniprot
Match: A0A5J4YAF9_9CHLO (Mitotic checkpoint BUB3-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YAF9_9CHLO)

HSP 1 Score: 248 bits (633), Expect = 1.210e-78
Identity = 117/193 (60.62%), Postives = 152/193 (78.76%), Query Frame = 0
Query:   39 PSQVFTMSVSDRRAVIGTSNRHIWVYDMRSL--AEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKG----DKVFPVNAMAFHPIYGTFATGGCDNMVNIWDGKNKKRLWQSNAYSTGIASLAFNHDGTRLAIAASYTFEQGAIAHPKDNIYVRDVIDSDVRPKARK 225
            P +VF+M+ S  R V+GTS RH+ +YD+RS+   +PEQ R SSLK+QTRC+R +P+  GYA+GS+EGRVA+EYFD S++ Q  KYAFKCHR+     D VFPVNA+AFHPI+GTFATGGCD +VNIWDG++KKRL+Q   Y T IA++AFN DG+ LA+A+SYT EQG I HP D +Y+R V +S+V+PK RK
Sbjct:  141 PGKVFSMAQSGSRMVVGTSGRHVLIYDLRSIKSGQPEQTRESSLKYQTRCIRCYPNGTGYALGSIEGRVAMEYFDNSEQVQAKKYAFKCHRRSEAGRDVVFPVNAIAFHPIFGTFATGGCDGVVNIWDGEHKKRLFQIAKYPTSIAAVAFNADGSLLAVASSYTHEQGDIDHPPDAVYLRTVNESEVKPKPRK 333          
BLAST of mRNA_S-firma_F_contig10994.1310.1 vs. uniprot
Match: A0A7S2HTA8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HTA8_9STRA)

HSP 1 Score: 246 bits (628), Expect = 5.090e-78
Identity = 112/186 (60.22%), Postives = 148/186 (79.57%), Query Frame = 0
Query:   39 PSQVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKGDKVFPVNAMAFHPIYGTFATGGCDNMVNIWDGKNKKRLWQSNAYSTGIASLAFNHDGTRLAIAASYTFEQGAIAHPKDNIYVRDVIDSDVRPKAR 224
            P + FTM++++ R V+GT++R I  YD+R+L++PE  R SSLK+QTRC+R FPD EG+A+ S+EGRVA+EYF  S E++  KYAFKCHR  + VFPVNA+AFHPI+GTFATGGCD  VN+WDG+NKKRL Q  +Y T IASL+FN DGT LA+A+SYTFE+G   HP D +++R + D+DV+PK R
Sbjct:  139 PGKAFTMALTETRIVVGTADRRIVCYDIRNLSQPEFSRESSLKYQTRCIRAFPDGEGFALSSIEGRVAIEYF--SPEAEAKKYAFKCHRVMNMVFPVNAIAFHPIHGTFATGGCDGYVNVWDGRNKKRLCQLPSYPTSIASLSFNRDGTMLAVASSYTFEEGEKDHPPDQLFIRHISDADVKPKPR 322          
BLAST of mRNA_S-firma_F_contig10994.1310.1 vs. uniprot
Match: UPI001FB078F4 (mitotic checkpoint protein BUB3.2 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB078F4)

HSP 1 Score: 242 bits (618), Expect = 2.610e-76
Identity = 109/190 (57.37%), Postives = 149/190 (78.42%), Query Frame = 0
Query:   39 PSQVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKG----DKVFPVNAMAFHPIYGTFATGGCDNMVNIWDGKNKKRLWQSNAYSTGIASLAFNHDGTRLAIAASYTFEQGAIAHPKDNIYVRDVIDSDVRPKAR 224
            P +++++S+   R V+ T+ RH+ +YD+R++++PEQRR SSLK+QTRCVR +P+  GYA+ SVEGRVA+E+FD S+  Q  KYAFKCHRK     D V+PVNA+AFHPIYGTFATGGCD  VN+WDG NKKRL+Q + Y T IA+L+F+ DG  LA+A+SYT+E+G   H  D+I+VR VI+S+V+PK +
Sbjct:  144 PERIYSLSLVGNRLVVATAGRHVNIYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEAGQSKKYAFKCHRKTEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQFSKYPTSIAALSFSRDGRLLAVASSYTYEEGDKTHEPDSIFVRSVIESEVKPKPK 333          
BLAST of mRNA_S-firma_F_contig10994.1310.1 vs. uniprot
Match: UPI001C276B2B (mitotic checkpoint protein BUB3.1-like isoform X2 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C276B2B)

HSP 1 Score: 239 bits (611), Expect = 6.620e-76
Identity = 111/190 (58.42%), Postives = 146/190 (76.84%), Query Frame = 0
Query:   39 PSQVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKG----DKVFPVNAMAFHPIYGTFATGGCDNMVNIWDGKNKKRLWQSNAYSTGIASLAFNHDGTRLAIAASYTFEQGAIAHPKDNIYVRDVIDSDVRPKAR 224
            P +V++MSV   R V+ T+ RH+ VYD+R++++PEQRR SSLK+QTRCVR +P+  GYA+ SVEGRVA+E+FD S+  Q  KYAFKCHRK     D V+PVNA+AFHPIYGTFATGGCD  VN+WDG NKKRL+Q   Y T IA+++F+ DG  LA+A+SYT+E+G  AH  D I+VR V + +V+PK +
Sbjct:   93 PERVYSMSVVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSETGQSKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGYVNVWDGNNKKRLYQYTKYPTSIAAVSFSRDGRLLAVASSYTYEEGDKAHEPDAIFVRSVNEVEVKPKPK 282          
BLAST of mRNA_S-firma_F_contig10994.1310.1 vs. uniprot
Match: F2ULS7_SALR5 (Mitotic checkpoint protein BUB3 n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2ULS7_SALR5)

HSP 1 Score: 241 bits (614), Expect = 6.660e-76
Identity = 104/190 (54.74%), Postives = 147/190 (77.37%), Query Frame = 0
Query:   39 PSQVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKG----DKVFPVNAMAFHPIYGTFATGGCDNMVNIWDGKNKKRLWQSNAYSTGIASLAFNHDGTRLAIAASYTFEQGAIAHPKDNIYVRDVIDSDVRPKAR 224
            P +V+TM+++D R ++G + RH+WV+++ +++  EQRR SS+KFQTRC+R  PD +GY + S+EGRVAV+Y D S+ SQ  K+AFKCHR      D ++PVNA+AFHP +GTFATGGCD +VN+WDG N+KR++Q + Y T IASL+FNHDG+ LAIAASYT+E+G   HP D I++R + + +V+PK R
Sbjct:  133 PDKVYTMALADDRVIVGMAGRHVWVWNLNNMSAVEQRRESSVKFQTRCIRAMPDAQGYVLASIEGRVAVDYLDPSESSQKRKFAFKCHRSKENGRDVIYPVNAVAFHPTFGTFATGGCDGLVNVWDGVNRKRVYQFHEYPTSIASLSFNHDGSLLAIAASYTYEEGDKPHPPDAIFIRRITEENVKPKPR 322          
BLAST of mRNA_S-firma_F_contig10994.1310.1 vs. uniprot
Match: A0A6A5MFH2_LUPAL (Uncharacterized protein n=2 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5MFH2_LUPAL)

HSP 1 Score: 241 bits (614), Expect = 1.050e-75
Identity = 112/190 (58.95%), Postives = 147/190 (77.37%), Query Frame = 0
Query:   39 PSQVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKG----DKVFPVNAMAFHPIYGTFATGGCDNMVNIWDGKNKKRLWQSNAYSTGIASLAFNHDGTRLAIAASYTFEQGAIAHPKDNIYVRDVIDSDVRPKAR 224
            P +V+++S+   R V+ T+ RH+ VYD+R++++PEQRR SSLK+QTRCVR +P+  GYA+ SVEGRVA+E+FD S+ SQ  KYAFKCHRK     D V+PVNAMAFHPIYGTFATGGCD  VN+WDG NKKRL+Q + Y + IA+L+F+ DG  LA+A+SYTFE G   H +D IYVR V + +V+PK +
Sbjct:  142 PERVYSLSLVGHRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEPSQAKKYAFKCHRKSEAGRDIVYPVNAMAFHPIYGTFATGGCDGYVNVWDGSNKKRLYQYSKYPSSIAALSFSRDGRLLAVASSYTFEDGPKPHEQDAIYVRSVNEIEVKPKPK 331          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10994.1310.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSN8_ECTSI5.040e-12489.84WD-40 repeat family protein / mitotic checkpoint p... [more]
A0A7S2UWG3_9STRA1.100e-8367.57Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835ZK40_9STRA1.940e-7962.57WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7S2BKC8_9STRA3.170e-7962.90Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A5J4YAF9_9CHLO1.210e-7860.62Mitotic checkpoint BUB3-like n=1 Tax=Trebouxia sp.... [more]
A0A7S2HTA8_9STRA5.090e-7860.22Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
UPI001FB078F42.610e-7657.37mitotic checkpoint protein BUB3.2 n=1 Tax=Impatien... [more]
UPI001C276B2B6.620e-7658.42mitotic checkpoint protein BUB3.1-like isoform X2 ... [more]
F2ULS7_SALR56.660e-7654.74Mitotic checkpoint protein BUB3 n=1 Tax=Salpingoec... [more]
A0A6A5MFH2_LUPAL1.050e-7558.95Uncharacterized protein n=2 Tax=Lupinus albus TaxI... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 225..225
NoneNo IPR availablePANTHERPTHR10971:SF5MITOTIC CHECKPOINT PROTEIN BUB3coord: 33..223
NoneNo IPR availablePANTHERPTHR10971MRNA EXPORT FACTOR AND BUB3coord: 33..223
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 116..160
e-value: 1.8E-4
score: 30.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 135..169
score: 9.205
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 15..225
e-value: 3.1E-55
score: 190.0
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 128..193
score: 8.624
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 39..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10994contigS-firma_F_contig10994:557..3293 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10994.1310.1mRNA_S-firma_F_contig10994.1310.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10994 393..4908 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10994.1310.1 ID=prot_S-firma_F_contig10994.1310.1|Name=mRNA_S-firma_F_contig10994.1310.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=226bp
MGASGADDRNSSGRRRTKKQKQKLHTPPRLSPPGPPRRPSQVFTMSVSDR
RAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGS
VEGRVAVEYFDTSKESQDNKYAFKCHRKGDKVFPVNAMAFHPIYGTFATG
GCDNMVNIWDGKNKKRLWQSNAYSTGIASLAFNHDGTRLAIAASYTFEQG
AIAHPKDNIYVRDVIDSDVRPKARK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat