prot_S-firma_F_contig10984.1295.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10984.1295.1
Unique Nameprot_S-firma_F_contig10984.1295.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length127
Homology
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BLAST of mRNA_S-firma_F_contig10984.1295.1 vs. uniprot
Match: D8LIR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIR2_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 2.630e-26
Identity = 69/121 (57.02%), Postives = 79/121 (65.29%), Query Frame = 0 
Query:   11 PPQEVSRNVLPVARDCGGGXXXX---EDGEGSVVGVED-TYDMLMVMSEATKEEAKERFLRGDYMGAAKKYFLAAETLDQRPPPTHPRLAGLRGRLRDLYLACMCNAAVAGFKAAKASPAP 127
            P Q+ SR+V  V  +  GG       ++GE S    E+  +D LMVMSEA KEE K +F RGDYMGAAK Y  AAE LD+R  PT  RL  LR RLR LY  CMCNAAVAGFKAA A+PAP
Sbjct:  409 PAQDGSRSVPAVRSEAEGGAGWQGQQQEGEESADAEEEMVFDTLMVMSEAMKEEGKAKFQRGDYMGAAKAYRRAAEALDERAAPTADRLEPLRTRLRALYEKCMCNAAVAGFKAAAATPAP 529
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BLAST of mRNA_S-firma_F_contig10984.1295.1 vs. uniprot
Match: A0A6H5KY59_9PHAE (DRBM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY59_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 1.310e-21
Identity = 53/75 (70.67%), Postives = 56/75 (74.67%), Query Frame = 0 
Query:   53 MSEATKEEAKERFLRGDYMGAAKKYFLAAETLDQRPPPTHPRLAGLRGRLRDLYLACMCNAAVAGFKAAKASPAP 127
            MSEA KEE K +F RGDYMGAAK Y  AAE LD+R  PT  RL  +R RLR LY  CMCNAAVAGFKAA ASPAP
Sbjct:    1 MSEAIKEEGKAKFQRGDYMGAAKAYRRAAEALDERTAPTADRLEPVRTRLRTLYEKCMCNAAVAGFKAAAASPAP 75
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10984.1295.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIR2_ECTSI2.630e-2657.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KY59_9PHAE1.310e-2170.67DRBM domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10984contigS-firma_F_contig10984:774..2802 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10984.1295.1mRNA_S-firma_F_contig10984.1295.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10984 774..2827 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10984.1295.1 ID=prot_S-firma_F_contig10984.1295.1|Name=mRNA_S-firma_F_contig10984.1295.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=127bp
MAAPPASAPFPPQEVSRNVLPVARDCGGGGGGGEDGEGSVVGVEDTYDML
MVMSEATKEEAKERFLRGDYMGAAKKYFLAAETLDQRPPPTHPRLAGLRG
RLRDLYLACMCNAAVAGFKAAKASPAP
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