prot_S-firma_F_contig1091.1216.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1091.1216.1
Unique Nameprot_S-firma_F_contig1091.1216.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length126
Homology
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BLAST of mRNA_S-firma_F_contig1091.1216.1 vs. uniprot
Match: A0A2L2YG31_PARTP (Speckle-type POZ protein (Fragment) n=2 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YG31_PARTP)

HSP 1 Score: 52.0 bits (123), Expect = 1.810e-5
Identity = 41/125 (32.80%), Postives = 63/125 (50.40%), Query Frame = 0 
Query:    2 DLFTLHKSGVLCDVRVASGDGAEVGAHGCVLGARSALFRGMLEAGLSESRSRVLSVGVEGVPADVAEGFLTFLYCGGVPPELEGESMALVAALGSAHMVERVTARAYRVLLSSFDLSDAGNVLNL 126
            DL  L  SG +CD+ +  G+   + AH  +LGARS +F+ M+E    ES S   SV +   P    + FL +LY G V       +M L+ +LG  + V+ +     R+LL+ F      +V N+
Sbjct:   21 DLRCLFTSGNMCDLEIKIGEDV-LHAHKLILGARSPVFKKMMEYDCLESSSN--SVTITDCPTLPFKKFLKYLYTGEVEDSTVN-TMMLLYSLGEKYNVKALPEACSRILLNKFITEPVDDVANI 141
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BLAST of mRNA_S-firma_F_contig1091.1216.1 vs. uniprot
Match: UPI00053CA9DF (putative BTB/POZ domain-containing protein At2g40440 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053CA9DF)

HSP 1 Score: 52.0 bits (123), Expect = 1.860e-5
Identity = 40/124 (32.26%), Postives = 61/124 (49.19%), Query Frame = 0 
Query:    3 LFTLHKSGVLCDVRVASGDGAEVGAHGCVLGARSALFRGMLEAGLSESRSRVLSVGVEGVPADVAEGFLTFLYCGGVPPELEGESMALVAALGSAHMVERVTARAYRVLLSSFDLSDAGNVLNL 126
            LF  +K G   DVR+ SGDG  V AH  +L  RS +FR MLE    ++ S   +V +  +  +  E F+ F+Y G +P +   + +  +      + V  +       L+SS DLS+   VL L
Sbjct:   14 LFNAYKEGRHADVRLKSGDGHVVNAHKLILSTRSRVFRDMLEPDECKT-SNEETVTLSELKHEELEAFIEFMYKGSLPHDKMKQHVRSLYLASDKYDVPYLEDVCSNHLVSSLDLSNVLEVLEL 136
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1091.1216.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2L2YG31_PARTP1.810e-532.80Speckle-type POZ protein (Fragment) n=2 Tax=Parast... [more]
UPI00053CA9DF1.860e-532.26putative BTB/POZ domain-containing protein At2g404... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.710.10coord: 1..126
e-value: 2.3E-15
score: 58.7
IPR000210BTB/POZ domainPFAMPF00651BTBcoord: 5..94
e-value: 3.9E-11
score: 43.2
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 13..83
score: 12.536
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 5..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1091contigS-firma_F_contig1091:18459..18836 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1091.1216.1mRNA_S-firma_F_contig1091.1216.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1091 18459..18836 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1091.1216.1 ID=prot_S-firma_F_contig1091.1216.1|Name=mRNA_S-firma_F_contig1091.1216.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=126bp
MDLFTLHKSGVLCDVRVASGDGAEVGAHGCVLGARSALFRGMLEAGLSES
RSRVLSVGVEGVPADVAEGFLTFLYCGGVPPELEGESMALVAALGSAHMV
ERVTARAYRVLLSSFDLSDAGNVLNL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011333SKP1/BTB/POZ_sf
IPR000210BTB/POZ_dom