prot_S-firma_F_contig10901.1204.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10901.1204.1
Unique Nameprot_S-firma_F_contig10901.1204.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length678
Homology
BLAST of mRNA_S-firma_F_contig10901.1204.1 vs. uniprot
Match: A0A0L0DTL8_THETB (Nuclear pore complex protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DTL8_THETB)

HSP 1 Score: 158 bits (399), Expect = 1.090e-36
Identity = 213/703 (30.30%), Postives = 298/703 (42.39%), Query Frame = 0
Query:    1 GLVSTLDPDAPLREP-AAHLVSEDTAAEADLLLSLWQLLRCGLIAQARNLCEQYGHPWRAAFLSGGFLWQDAAAGPTAQGVVER------GGNPFSLLWKWVCWQAGEKAAQAPAQATSSTARRVAATEHALYALLGGHATQLLKSPLVHTWDDAVWALCVCAREARLARKVAAVRQAQLEETAHVPVAASDGGAGATTALLAALDGGEFALSRVSAGGVWGHLRESALLGDGAKAGGSLPFAAIQERLVQAAEGGPGAADQVVVQLRALVGALAAPSAGGVPQAAVRLPTAPLPAEAL------SFCRFAAHYAVLHMPEGEPLVAACREVVLVYASHLMATLQVDKVARFVCHCGPAR-VHEYVKFLHLVVDAPQRALAVTEAHQWMASDLRAVLSLTVESLARLQGGGAGGVARLMAIKWLLQPSTPQFLGDAVAAANALMR-FLMTEPSPSRLVRSLSA-PQQAAAGGGNLGAATLLLVGSPADRLPPILPPNVLDLLEEHRGGQARPD-----DDLTHAIAEHSAWVQYLHARHAYAGWAAVLTEELPLPXXXXXXDGGHTHAARARFERDTIDHEEFLRAAEVEVRRRAADAALRLNQVLQAGADWLSPPEALAPRGDGNAGALFVSVDVGEV-RSTCLPPVALMLHDVLYRT---AMCLQVADVVADEVSRLSDLFPPAALRDLLTRVNLSAAQLL 678
            GLV TLDPDAPLR+P A+ L  +D   E  LL  LW L++ G + +ARN+C + G PWRAA L GG  + DA      +   ER       GN   LLW+ +         Q  A   SS        E ALY +L G  + +L  PL  +W+D +WA C  A  + L   +A  R +   E     + A+   A   +A  + LD      + +S         +S  L    +A    PF  IQ+ L+ A E            L  L G   A SA  V +A   LP +   A A+      S   F     V   PE E   AA   ++  Y  HL+A+ Q   +A +      +R V  Y KFL  V D   RA A+  A      D+RA+ S  V ++       A    ++ +++WL     P    +A+  ANAL R  L+     +R   SL A P  A A    L A  +  V      L  +LP + LD+L   R G A  +         +A+ E    V YL    AY  W+ +L E  P+P           ++ +  ++++   H+E     +  +    A     LN  L   + WL     + P   G         D  E+ RS C+P +  MLH VLY T   A  L+VAD+VAD    L+  F PA LR LL    LS+ QLL
Sbjct:  187 GLVKTLDPDAPLRDPDASGLHPDDADLEERLLRHLWLLVKAGKLDEARNVCRKVGQPWRAASLGGGAAFHDAIYAGEVKLTGERIDDAAPAGNVQRLLWRQMV--------QVLASEASSQ------YERALYGVLAGSLSAVL--PLCTSWEDHLWARCATALTSVLDTHLATARPSANAELVRTGLPAAMDIAQPESAGASQLDMQSMFAALLSEA-------QSPELRTATRA----PFHTIQQLLITAQEN---------AALVTLAGWAVADSAAAV-EALDALPGSHAHARAILLRFGASLVLFFRSIEVALSPEAE---AAGVALLTGYVEHLIASGQSALIALYTAQLPSSRQVGIYAKFLEGVDDGSARADALRAAEA-ARLDVRAITSQVVRNIYLASEAEASDERKVHSLQWLC--FYPDQRAEALVQANALARSLLLAHVESARFDASLKATPADAVAA--LLAAVPVAKVEVTRQLLSVVLPADTLDIL---RDGWAEAELVEAPAREANAVHEFQCLVAYLEVLSAYDEWSNILFER-PVPPAEPDSS---RYSDKLMYDQEKKAHDEAYELWQQAMGDSTAVVLDLLNATLLFPSGWLKD---VVPIDHGRTAGDAARADQLELLRSVCIPSLCFMLHRVLYDTHDFAGSLKVADLVADPHYNLAATFSPAELRQLLRLFRLSSLQLL 834          
BLAST of mRNA_S-firma_F_contig10901.1204.1 vs. uniprot
Match: A0A024U1T4_9STRA (Nuclear pore complex protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U1T4_9STRA)

HSP 1 Score: 103 bits (257), Expect = 4.310e-19
Identity = 57/152 (37.50%), Postives = 80/152 (52.63%), Query Frame = 0
Query:    5 TLDPDAPLREPAAHLVSEDTAAEADLLLSLWQLLRCGLIAQARNLCEQYGHPWRAAFLSGGFLWQDAAAGPTAQGVVERGGNPFSLLWKWVCWQAGEKAAQAPAQATSSTARRVAATEHALYALLGGHATQLLKSPLVHTWDDAVWALCVCA 156
            ++DPD+ LR+    + ++D   EADLL S+WQLLR G   +A  LC Q G PWRAA L+GG       +     G V+R GNPF ++WK +CWQ  +       +     +      E  +Y  L G+   LL+S L  +W+D  WAL   A
Sbjct:  389 SVDPDSTLRDGDFQVDNDDAEDEADLLKSVWQLLRAGQPREAAELCIQLGQPWRAASLNGGDF---CGSCDNDDGGVQRWGNPFRMVWKNMCWQFAQAPLNDGRKLHKGKSLEAREYESIIYGALSGNTAVLLRSALCESWEDHCWALLSAA 537          
BLAST of mRNA_S-firma_F_contig10901.1204.1 vs. uniprot
Match: A0A2P6VQT8_9CHLO (Nuclear pore complex protein n=2 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VQT8_9CHLO)

HSP 1 Score: 91.7 bits (226), Expect = 2.400e-15
Identity = 68/170 (40.00%), Postives = 90/170 (52.94%), Query Frame = 0
Query:    2 LVSTLDPDAPLREPAAHLVSEDTAAEADLLLSLWQLLRCGLIAQARNLCEQYGHPWRAAFLSGGFLW--------QDAA-----AGPTAQGV---VERGGNPFSLLWKWVCWQAGEKAAQAPAQATSSTARRVAATEHALYALLGGHATQLLKSPLVHTWDDAVWALCVC 155
            LV+ LDPDAP R+  A L ++D   E  L   L++LLR G +A+A  LCE  G PWRAA L GG +          +AA     AG  AQ +   VE GG     LW+W C Q  E+A  A A+A+ +        E A+YA LG H  ++L  P+  +W+DA WA   C
Sbjct:  281 LVTELDPDAPSRQHKA-LHADDAKDEERLAARLFRLLRAGRVAEACQLCEAVGQPWRAASLGGGGVHGALPLGAAAEAADGLDPAGEQAQDLAAEVEGGGALLRALWRWSCLQLAERAGAA-AEASGAGLH-----EAAVYAALGCHVARVL--PVCTSWEDACWAYLRC 441          
BLAST of mRNA_S-firma_F_contig10901.1204.1 vs. uniprot
Match: UPI0014432E7F (nuclear pore complex protein Nup107 n=1 Tax=Megalopta genalis TaxID=115081 RepID=UPI0014432E7F)

HSP 1 Score: 76.3 bits (186), Expect = 1.330e-10
Identity = 55/167 (32.93%), Postives = 83/167 (49.70%), Query Frame = 0
Query:    2 LVSTLDPDAPLRE--PAAHLVSEDTAAEADLLLSLWQLLRCGLIAQARNLCEQYGHPWRAAFLSGGFLWQDAA-AGPTAQGVVERGGNPFSLLWKWVCWQAGEKAAQAPAQATSSTARRVAATEHALYALLGGHATQLLKSPLVHTWDDAVWALCVCAREARLARKV 165
            L+S+LDPDAP+RE  P   L  ED   +A L   ++  +RCG +A+A+ L E  G PWRAA L G   +QD     P     +   GNP   LWK   W+  +              +R+     A+YA L G+  Q+L+  +  +W DA+WA      + ++ R++
Sbjct:  303 LISSLDPDAPIREGKPLHDLDRED---DARLEKRMFIEVRCGRLAKAQALAEHCGQPWRAACLLGWIPYQDPNYKNPLTDTKLPIEGNPNRSLWKLCAWELCQD-------------KRIGQFYRAVYASLCGNVQQMLQ--VATSWQDALWAHMKALLDIKVEREI 451          
BLAST of mRNA_S-firma_F_contig10901.1204.1 vs. uniprot
Match: UPI0013041FBE (nuclear pore complex protein Nup107 n=1 Tax=Nomia melanderi TaxID=2448451 RepID=UPI0013041FBE)

HSP 1 Score: 76.3 bits (186), Expect = 1.330e-10
Identity = 56/167 (33.53%), Postives = 82/167 (49.10%), Query Frame = 0
Query:    2 LVSTLDPDAPLRE--PAAHLVSEDTAAEADLLLSLWQLLRCGLIAQARNLCEQYGHPWRAAFLSGGFLWQDAA-AGPTAQGVVERGGNPFSLLWKWVCWQAGEKAAQAPAQATSSTARRVAATEHALYALLGGHATQLLKSPLVHTWDDAVWALCVCAREARLARKV 165
            LVS+LDPDAP+RE  P   L  ED   +A L   ++  +RCG +++A+ L E  G PWRAA L G   + D     P +   +   GNP   LWK   W   +              +RV     A+YA L G+  Q+L+  +  +W DA+WA      + ++ R+V
Sbjct:  304 LVSSLDPDAPIREGKPLHDLDRED---DARLEKRMFIEVRCGRLSKAQALAEYCGQPWRAACLLGWIPYHDPNYKNPLSDTKLPIEGNPNRSLWKLCAWDLSQD-------------KRVGQFYRAIYASLCGNVQQMLQ--VASSWQDALWAFMKTLLDIKVEREV 452          
BLAST of mRNA_S-firma_F_contig10901.1204.1 vs. uniprot
Match: UPI0007670DAB (nuclear pore complex protein Nup107 n=1 Tax=Dufourea novaeangliae TaxID=178035 RepID=UPI0007670DAB)

HSP 1 Score: 73.9 bits (180), Expect = 6.610e-10
Identity = 56/167 (33.53%), Postives = 81/167 (48.50%), Query Frame = 0
Query:    2 LVSTLDPDAPLRE--PAAHLVSEDTAAEADLLLSLWQLLRCGLIAQARNLCEQYGHPWRAAFLSGGFLWQDAA-AGPTAQGVVERGGNPFSLLWKWVCWQAGEKAAQAPAQATSSTARRVAATEHALYALLGGHATQLLKSPLVHTWDDAVWALCVCAREARLARKV 165
            LVS+LDPDAP+RE  P   L  ED   +A L   ++  +RCG + +A+ L E  G PWRAA L G     D     P +   +   GNP   LWK   W+  +              +RV     A+YA L G+  Q+L+  +  +W DA+WA      + ++ R+V
Sbjct:  226 LVSSLDPDAPIREGKPLHDLDRED---DARLEKRMFIEVRCGRLTKAQALAEHCGQPWRAACLLGWIPHHDPNYKNPLSDTKLSIEGNPNRSLWKLCAWELCQD-------------KRVGQFYRAIYASLCGNVQQMLQ--IACSWQDALWAYIKTLLDIKVEREV 374          
BLAST of mRNA_S-firma_F_contig10901.1204.1 vs. uniprot
Match: A0A2J7QXA4_9NEOP (Nuclear pore complex protein n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7QXA4_9NEOP)

HSP 1 Score: 73.6 bits (179), Expect = 9.070e-10
Identity = 54/157 (34.39%), Postives = 78/157 (49.68%), Query Frame = 0
Query:    2 LVSTLDPDAPLRE--PAAHLVSEDTAAEADLLLSLWQLLRCGLIAQARNLCEQYGHPWRAAFLSGGFLWQDAAAGPTAQGVVERG-----GNPFSLLWKWVCWQAGEKAAQAPAQATSSTARRVAATEHALYALLGGHATQLLKSPLVHTWDDAVWA 151
            +VSTLDPDAPLRE  P   +  ED   E+ L+  ++  +RCG + +A+ LC   G  WRAA L G  L  D     TA+G+ E       GNP   +WK + W+  E              +R+     A +A L GH + L+   +  +W+D +WA
Sbjct:  283 IVSTLDPDAPLREGKPLHDIDMED---ESRLVKEVFVQIRCGQLEEAQMLCMHTGQEWRAAALEGWRLHHDPNY-ETARGIDEVDKLPIEGNPNRDIWKLMAWRMAED-------------KRMPVYTRATFAALCGHLSALVD--VCQSWEDLLWA 420          
BLAST of mRNA_S-firma_F_contig10901.1204.1 vs. uniprot
Match: A0A6P3UUL5_BOMIM (Nuclear pore complex protein n=13 Tax=Apinae TaxID=70987 RepID=A0A6P3UUL5_BOMIM)

HSP 1 Score: 73.6 bits (179), Expect = 9.090e-10
Identity = 54/167 (32.34%), Postives = 81/167 (48.50%), Query Frame = 0
Query:    2 LVSTLDPDAPLRE--PAAHLVSEDTAAEADLLLSLWQLLRCGLIAQARNLCEQYGHPWRAAFLSGGFLWQDAA-AGPTAQGVVERGGNPFSLLWKWVCWQAGEKAAQAPAQATSSTARRVAATEHALYALLGGHATQLLKSPLVHTWDDAVWALCVCAREARLARKV 165
            LVS+LDPDAP+RE  P   L  ED   +A +   ++  +RCG + +A+ L +  G PWRAA L G     D     P +   +   GNP   LWK   W+  ++             RRV      +YA L G+  Q+L+  +  +W DA+WA      + ++ R+V
Sbjct:  299 LVSSLDPDAPIREGKPLHDLDRED---DARMEKRMFIEVRCGRLQKAQALAQYCGQPWRAACLLGWIPHHDPNYQNPLSDSKLPIEGNPNRSLWKLCAWELSQE-------------RRVGQFYRTIYASLCGNVQQMLQ--VASSWQDALWAYMKTLLDIKVEREV 447          
BLAST of mRNA_S-firma_F_contig10901.1204.1 vs. uniprot
Match: A0A0L7RBR0_9HYME (Nuclear pore complex protein n=2 Tax=Habropoda laboriosa TaxID=597456 RepID=A0A0L7RBR0_9HYME)

HSP 1 Score: 73.6 bits (179), Expect = 9.100e-10
Identity = 55/167 (32.93%), Postives = 80/167 (47.90%), Query Frame = 0
Query:    2 LVSTLDPDAPLRE--PAAHLVSEDTAAEADLLLSLWQLLRCGLIAQARNLCEQYGHPWRAAFLSGGFLWQDAA-AGPTAQGVVERGGNPFSLLWKWVCWQAGEKAAQAPAQATSSTARRVAATEHALYALLGGHATQLLKSPLVHTWDDAVWALCVCAREARLARKV 165
            LVS+LDPDAP+RE  P   L  ED   +A L   ++  +RCG + +A+ L E  G PWRAA L G     D     P +   +   GNP   LWK   W+  +              +RV     A+YA L G+  Q+L+  +  +W D +WA      + ++ R+V
Sbjct:  303 LVSSLDPDAPIRENKPLHDLDRED---DARLEKRMFIEVRCGRLQKAQALAEHCGQPWRAACLLGWIPHHDPNYRNPLSDTKLPIQGNPNRSLWKLCAWELSQD-------------KRVGQFYRAIYASLCGNVQQMLQ--VASSWQDGLWAYMKALLDIKVEREV 451          
BLAST of mRNA_S-firma_F_contig10901.1204.1 vs. uniprot
Match: I4Y5Y3_WALMC (Nuclear pore complex protein n=6 Tax=Wallemia mellicola TaxID=1708541 RepID=I4Y5Y3_WALMC)

HSP 1 Score: 72.0 bits (175), Expect = 2.500e-9
Identity = 51/153 (33.33%), Postives = 75/153 (49.02%), Query Frame = 0
Query:    1 GLVSTLDPDAPLREPAAHLVSEDTAAEADLLLSLWQLLRCGLIAQARNLCEQYGHPWRAAFLSGGFLWQDAAAGPTAQGVVERG--GNPFSLLWKWVCWQAGEKAAQAPAQATSSTARRVAATEHALYALLGGHATQLLKSPLVHTWDDAVWA 151
            GLV++LDPDAP+R+    L  ED+  +  L  +L++ +R G +  A + C     PWRAA L GG LW D +   + +  +  G  GN    LWK +  Q  E     P              E ALY  L G  + +L  P+ ++W+D +WA
Sbjct:  148 GLVTSLDPDAPVRQHK-QLDVEDSQYDKPLTRTLFEYVRLGRMDLALDACRSSDQPWRAASLRGGQLWDDPSLA-SEEIALNNGISGNKQRKLWKQIASQLSENPDFDP-------------YERALYGCLSGSLSSVL--PVCNSWEDHLWA 283          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10901.1204.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0L0DTL8_THETB1.090e-3630.30Nuclear pore complex protein n=1 Tax=Thecamonas tr... [more]
A0A024U1T4_9STRA4.310e-1937.50Nuclear pore complex protein n=2 Tax=Aphanomyces i... [more]
A0A2P6VQT8_9CHLO2.400e-1540.00Nuclear pore complex protein n=2 Tax=Micractinium ... [more]
UPI0014432E7F1.330e-1032.93nuclear pore complex protein Nup107 n=1 Tax=Megalo... [more]
UPI0013041FBE1.330e-1033.53nuclear pore complex protein Nup107 n=1 Tax=Nomia ... [more]
UPI0007670DAB6.610e-1033.53nuclear pore complex protein Nup107 n=1 Tax=Dufour... [more]
A0A2J7QXA4_9NEOP9.070e-1034.39Nuclear pore complex protein n=1 Tax=Cryptotermes ... [more]
A0A6P3UUL5_BOMIM9.090e-1032.34Nuclear pore complex protein n=13 Tax=Apinae TaxID... [more]
A0A0L7RBR0_9HYME9.100e-1032.93Nuclear pore complex protein n=2 Tax=Habropoda lab... [more]
I4Y5Y3_WALMC2.500e-933.33Nuclear pore complex protein n=6 Tax=Wallemia mell... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.3450.20coord: 1..137
e-value: 3.4E-12
score: 48.4
NoneNo IPR availableGENE3D1.20.190.50coord: 457..678
e-value: 2.9E-21
score: 78.1
IPR007252Nuclear pore protein 84/107PFAMPF04121Nup84_Nup100coord: 292..672
e-value: 1.7E-17
score: 62.9
coord: 2..171
e-value: 2.8E-31
score: 108.4
IPR007252Nuclear pore protein 84/107PANTHERPTHR13003NUP107-RELATEDcoord: 2..675

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10901contigS-firma_F_contig10901:1143..3341 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10901.1204.1mRNA_S-firma_F_contig10901.1204.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10901 1143..3341 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10901.1204.1 ID=prot_S-firma_F_contig10901.1204.1|Name=mRNA_S-firma_F_contig10901.1204.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=678bp
GLVSTLDPDAPLREPAAHLVSEDTAAEADLLLSLWQLLRCGLIAQARNLC
EQYGHPWRAAFLSGGFLWQDAAAGPTAQGVVERGGNPFSLLWKWVCWQAG
EKAAQAPAQATSSTARRVAATEHALYALLGGHATQLLKSPLVHTWDDAVW
ALCVCAREARLARKVAAVRQAQLEETAHVPVAASDGGAGATTALLAALDG
GEFALSRVSAGGVWGHLRESALLGDGAKAGGSLPFAAIQERLVQAAEGGP
GAADQVVVQLRALVGALAAPSAGGVPQAAVRLPTAPLPAEALSFCRFAAH
YAVLHMPEGEPLVAACREVVLVYASHLMATLQVDKVARFVCHCGPARVHE
YVKFLHLVVDAPQRALAVTEAHQWMASDLRAVLSLTVESLARLQGGGAGG
VARLMAIKWLLQPSTPQFLGDAVAAANALMRFLMTEPSPSRLVRSLSAPQ
QAAAGGGNLGAATLLLVGSPADRLPPILPPNVLDLLEEHRGGQARPDDDL
THAIAEHSAWVQYLHARHAYAGWAAVLTEELPLPPPPPPADGGHTHAARA
RFERDTIDHEEFLRAAEVEVRRRAADAALRLNQVLQAGADWLSPPEALAP
RGDGNAGALFVSVDVGEVRSTCLPPVALMLHDVLYRTAMCLQVADVVADE
VSRLSDLFPPAALRDLLTRVNLSAAQLL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007252Nup84/Nup107