prot_S-firma_F_contig1089.1181.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1089.1181.1
Unique Nameprot_S-firma_F_contig1089.1181.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length435
Homology
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BLAST of mRNA_S-firma_F_contig1089.1181.1 vs. uniprot
Match: A0A6H5KE32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE32_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 1.480e-10
Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = 0 
Query:    5 SSSRCYHVGCPKRPTYGIDLSRRRESCAEHARPGMVNIDLT 45
            +++ C + GCPKRPTYGI+ SRRRE CA HA PGMVNIDLT
Sbjct:   28 ATTSCRYPGCPKRPTYGIEASRRRECCAVHALPGMVNIDLT 68
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BLAST of mRNA_S-firma_F_contig1089.1181.1 vs. uniprot
Match: D7FWU8_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWU8_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 5.470e-9
Identity = 28/41 (68.29%), Postives = 34/41 (82.93%), Query Frame = 0 
Query:    5 SSSRCYHVGCPKRPTYGIDLSRRRESCAEHARPGMVNIDLT 45
            SS +C H GC KRPTYG++ SR+RE C++HARP MVNIDLT
Sbjct:   52 SSGKCLHPGCSKRPTYGVEASRKRECCSQHARPWMVNIDLT 92
[Close]
BLAST of mRNA_S-firma_F_contig1089.1181.1 vs. uniprot
Match: A0A6H5KFP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP4_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 5.790e-8
Identity = 27/41 (65.85%), Postives = 34/41 (82.93%), Query Frame = 0 
Query:    5 SSSRCYHVGCPKRPTYGIDLSRRRESCAEHARPGMVNIDLT 45
            SS +C + GC KRPTYG++ SR+RE C++HARP MVNIDLT
Sbjct:    3 SSGKCLYSGCSKRPTYGVEASRKRECCSQHARPWMVNIDLT 43
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1089.1181.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KE32_9PHAE1.480e-1070.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWU8_ECTSI5.470e-968.29EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KFP4_9PHAE5.790e-865.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1089contigS-firma_F_contig1089:18040..19771 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1089.1181.1mRNA_S-firma_F_contig1089.1181.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1089 18040..19771 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1089.1181.1 ID=prot_S-firma_F_contig1089.1181.1|Name=mRNA_S-firma_F_contig1089.1181.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=435bp
MQSPSSSRCYHVGCPKRPTYGIDLSRRRESCAEHARPGMVNIDLTRCAKP
NCETRATFGDPVSGRRKFCSKHAPPGMLNVERKKCARENCHMPPAYWHPE
NRKRRCCIEHAEEGMVKLDKKLCPFKGCFTSASYGVPGEKRKFCAAHAQP
GMVSIGGRRCAAEDCTKRANYGVEGTRNRQFCAEHAKAGMVNINNQKPPA
AMIIRRKAGGTAETASPRKKNGGSTGGGLISGGLVGGGSPGSTASTTTSS
FDAGNVGFPPESAVSSHSNMNGNGSRWHLGADVAGAYLGAGGVEDAGTGG
RGGGGGVGVERGPPTRAENRARSSEAGIGEAGSGRAGFEEREISDKKRKP
GGMVASSPRKGKQVRPPGAPEEDEEEEEEEVEEEEDEGATSSSSSAALPG
RSRILLPWPKSKAAPPLLLTSEGWSTWEWRPVEV*
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