prot_S-firma_F_contig10880.1171.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10880.1171.1
Unique Nameprot_S-firma_F_contig10880.1171.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length170
Homology
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BLAST of mRNA_S-firma_F_contig10880.1171.1 vs. uniprot
Match: D7G7E7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7E7_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 2.250e-26
Identity = 53/63 (84.13%), Postives = 58/63 (92.06%), Query Frame = 0 
Query:  107 KVLVRLRHVYGHDAELYDEFSRELLSPLLRLVPSALSSPEAVRLSSTVVVSLRENCAACLFRE 169
            +VLVRLRHVY HDAELY+EFSRELLSP+LRLVPSALSS +AVRLSS VVVSLRENC ACL R+
Sbjct:   34 EVLVRLRHVYDHDAELYEEFSRELLSPVLRLVPSALSSLDAVRLSSRVVVSLRENCVACLVRK 96
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10880.1171.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7E7_ECTSI2.250e-2684.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 71..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10880contigS-firma_F_contig10880:457..1777 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10880.1171.1mRNA_S-firma_F_contig10880.1171.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10880 457..1777 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10880.1171.1 ID=prot_S-firma_F_contig10880.1171.1|Name=mRNA_S-firma_F_contig10880.1171.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=170bp
QSRLSALGFGRDLSSGGGGGGGGGLSMWDTDPMGGDDDEEDGEGGQGYVP
VWHGAAGGGGGGGGGGRGNGGEDEDQEHDDDEQEEEEEEEEEEEDAESAD
KFPPDGKVLVRLRHVYGHDAELYDEFSRELLSPLLRLVPSALSSPEAVRL
SSTVVVSLRENCAACLFREV
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