prot_S-firma_F_contig1088.1170.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1088.1170.1
Unique Nameprot_S-firma_F_contig1088.1170.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length411
Homology
BLAST of mRNA_S-firma_F_contig1088.1170.1 vs. uniprot
Match: A0A6H5JIA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIA6_9PHAE)

HSP 1 Score: 276 bits (706), Expect = 1.910e-86
Identity = 189/331 (57.10%), Postives = 215/331 (64.95%), Query Frame = 0
Query:   27 MLVYARGSSHKFRLSLMALVCVRFQCISTQAFL---VSNTPRVAAPAPRGLGKTAMVKQ--SATASPSRRSNSGALCSTGRSS-PLLPSARPRELPRPRVPRALASSSSSTSPPNHACSPAAPEGSASVPSAAPEVGKKPAQASXXXXXXXXXGFGAKQAEKPAGKETPQLQRRPIPLRPT------QPKTPPRGNNLLVVGLGNPGDQYKMTRHNAGFMVAEELARRYGGTLKIKTAFQGEYCSIMVKGKSVGILRPITYMNNSGTSARKVMDFFKLPNNAVITLVDEVALNFGQLRLKTKGGTAGHNGLKSLQAHLKTQEYTRLRIGVG 345
            ML++ R       LSLM+  C+     S QAFL   +++T R +  A R      M KQ  + T   SRR  S A  S+GRSS PLL S       RPRVP  L S++SS+     A SPA   G  + P  AP+  + P QA          GFG+    KPAG+++                   QPK PPRG+NLLVVGLGNPGD+YKMTRHNAGF+VAEELARR+GGTLKIKTAFQGEYCS+ VK KSVGILRPITYMNNSG SARKVMDFFKLP NA I LVDEVAL+FGQLRLK KGG  GHNGLKSLQAHLKT EYTRLRIGVG
Sbjct:    1 MLMHTRRFWRNSLLSLMSSACLMRPPPSAQAFLLTSIASTARTSTTA-RLANAIIMGKQQVATTTISSRRVCSKAPRSSGRSSNPLLSSM------RPRVPHLLDSAASSSL----AASPAT--GDTAAP--APKADQNPPQAGATGEGR---GFGS----KPAGQQSQXXXXXXXXXXXXXXXXXPQPKAPPRGDNLLVVGLGNPGDKYKMTRHNAGFLVAEELARRHGGTLKIKTAFQGEYCSVRVKHKSVGILRPITYMNNSGISARKVMDFFKLPMNAAIVLVDEVALDFGQLRLKGKGGAGGHNGLKSLQAHLKTPEYTRLRIGVG 309          
BLAST of mRNA_S-firma_F_contig1088.1170.1 vs. uniprot
Match: D8LSW9_ECTSI (Peptidyl-tRNA hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW9_ECTSI)

HSP 1 Score: 213 bits (541), Expect = 2.680e-64
Identity = 105/120 (87.50%), Postives = 109/120 (90.83%), Query Frame = 0
Query:  226 MTRHNAGFMVAEELARRYGGTLKIKTAFQGEYCSIMVKGKSVGILRPITYMNNSGTSARKVMDFFKLPNNAVITLVDEVALNFGQLRLKTKGGTAGHNGLKSLQAHLKTQEYTRLRIGVG 345
            MTRHNAGF+VAEELARR+GGTLKIKTAFQGEYCS+ V  KSVGILRPITYMNNSG SARKVMDFFKLP NA I LVDEVAL+FGQLRLK KGG  GHNGLKSLQAHLKT EYTRLRIGVG
Sbjct:    1 MTRHNAGFLVAEELARRHGGTLKIKTAFQGEYCSVRVNDKSVGILRPITYMNNSGMSARKVMDFFKLPMNAAIVLVDEVALDFGQLRLKGKGGAGGHNGLKSLQAHLKTPEYTRLRIGVG 120          
BLAST of mRNA_S-firma_F_contig1088.1170.1 vs. uniprot
Match: A0A4D9CWV7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWV7_9STRA)

HSP 1 Score: 185 bits (470), Expect = 5.980e-48
Identity = 84/140 (60.00%), Postives = 110/140 (78.57%), Query Frame = 0
Query:  207 PRGNNLLVVGLGNPGDQYKMTRHNAGFMVAEELARRYGGTLKIKTAFQGEYCSIMVKGKSVGILRPITYMNNSGTSARKVMDFFKLPNNAVITLVDEVALNFGQLRLKTKGGTAGHNGLKSLQAHLKTQEYTRLRIGVGG 346
            PR  NLL+VGLGNPG +Y MTRHNAGF+  + LARR G   ++++AFQGEY  +  KGKSVG+L+P T+MN SG S RKV+D+FKLP ++V+ +VDEVAL+ GQ+RL+  G   GHNGLKS+++ LK ++Y RLRIGVGG
Sbjct:  742 PRSKNLLIVGLGNPGKEYAMTRHNAGFLAVDLLARRLGADFRLRSAFQGEYGCVAYKGKSVGLLKPTTFMNRSGQSLRKVLDYFKLPVSSVLVVVDEVALDIGQIRLRQTGSAGGHNGLKSIESCLKCKDYNRLRIGVGG 881          
BLAST of mRNA_S-firma_F_contig1088.1170.1 vs. uniprot
Match: A0A836CKJ3_9STRA (Peptidyl-tRNA hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKJ3_9STRA)

HSP 1 Score: 162 bits (411), Expect = 6.200e-45
Identity = 79/120 (65.83%), Postives = 95/120 (79.17%), Query Frame = 0
Query:  226 MTRHNAGFMVAEELARRYGGTLKIKTAFQGEYCSIMVKGKSVGILRPITYMNNSGTSARKVMDFFKLPNNAVITLVDEVALNFGQLRLKTKGGTAGHNGLKSLQAHLKTQEYTRLRIGVG 345
            MTRHN GF+VA+EL+RR+G  LK ++ FQG Y S  VKGKSVG+L+P T+MNNSG +ARKV DFFKL  + V+ L D+VAL+FG LRL+ KG   GHNGLKSLQ HL TQ+Y RLRIGVG
Sbjct:    1 MTRHNIGFLVADELSRRWGCALKTQSKFQGLYGSAQVKGKSVGVLKPSTFMNNSGQAARKVTDFFKLNADHVLVLTDDVALDFGALRLRMKGSAGGHNGLKSLQQHLGTQDYARLRIGVG 120          
BLAST of mRNA_S-firma_F_contig1088.1170.1 vs. uniprot
Match: A0A7S3ACE0_9RHOD (Peptidyl-tRNA hydrolase n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ACE0_9RHOD)

HSP 1 Score: 159 bits (401), Expect = 8.550e-43
Identity = 66/139 (47.48%), Postives = 104/139 (74.82%), Query Frame = 0
Query:  208 RGNNLLVVGLGNPGDQYKMTRHNAGFMVAEELARRYGGTLKIKTAFQGEYCSIMVKGKSVGILRPITYMNNSGTSARKVMDFFKLPNNAVITLVDEVALNFGQLRLKTKGGTAGHNGLKSLQAHLKTQEYTRLRIGVGG 346
            RG+ L V+GLGNPG++++ TRHN GF + E  A+R+GG +K+   +  E C I ++ K+V +++P+T+MN SGTS RK++DF+KLP++A++ + D++ L  G++RL+ KG + GHNGLK ++  L TQ Y RL++GVGG
Sbjct:   32 RGSRLAVIGLGNPGNEFRSTRHNVGFDIIEAFAQRHGGNMKMAQKYLAEMCEIKLENKTVMLVKPMTFMNLSGTSVRKIVDFYKLPHDAILIVADDIYLELGRVRLRAKGSSGGHNGLKHIEKSLGTQIYPRLKVGVGG 170          
BLAST of mRNA_S-firma_F_contig1088.1170.1 vs. uniprot
Match: A0A2A4YKD0_9BACT (Peptidyl-tRNA hydrolase n=1 Tax=Candidatus Aerophobetes bacterium TaxID=2030807 RepID=A0A2A4YKD0_9BACT)

HSP 1 Score: 149 bits (376), Expect = 2.320e-39
Identity = 68/133 (51.13%), Postives = 92/133 (69.17%), Query Frame = 0
Query:  213 LVVGLGNPGDQYKMTRHNAGFMVAEELARRYGGTLKIKTAFQGEYCSIMVKGKSVGILRPITYMNNSGTSARKVMDFFKLPNNAVITLVDEVALNFGQLRLKTKGGTAGHNGLKSLQAHLKTQEYTRLRIGVG 345
            L+VGLGNPG +Y+MTRHN GF+V E+LA R G TL    AF G +    ++GK V  L P T+MN SG + R+ +D++ L    ++ + D+VAL FG+LR++ KG   GHNGLK ++ HL TQEY RLR+GVG
Sbjct:    7 LIVGLGNPGKKYEMTRHNMGFLVVEKLAERLGATLSPNKAFMGRFGKASIEGKKVYFLLPSTFMNLSGQAVRRCIDYYNLTKERLLIVSDDVALPFGKLRIREKGSAGGHNGLKDVERHLGTQEYQRLRVGVG 139          
BLAST of mRNA_S-firma_F_contig1088.1170.1 vs. uniprot
Match: A0A0C1YMG5_9CYAN (Peptidyl-tRNA hydrolase n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A0C1YMG5_9CYAN)

HSP 1 Score: 147 bits (370), Expect = 1.760e-38
Identity = 69/139 (49.64%), Postives = 96/139 (69.06%), Query Frame = 0
Query:  213 LVVGLGNPGDQYKMTRHNAGFMVAEELARRYGGTLKIKTAFQGEYCSIM-VKGKSVGILRPITYMNNSGTSARKVMDFFKLPNNAVITLVDEVALNFGQLRLKTKGGTAGHNGLKSLQAHLKTQEYTRLRIGVGGEDAN 350
            L+VGLGNPG++Y  TRHN GF V + LARR+  +L     FQGE+   M + G+ V +L+P TYMN SG + R V+D++KLP  +++ + D++AL  G+LRL+  G   GHNG+KSL AHL TQE+ RLR+G+G    N
Sbjct:    7 LIVGLGNPGEKYAQTRHNVGFDVLDALARRWQISLSNHRKFQGEFGEGMAIAGQKVFLLKPTTYMNRSGQAVRAVLDWYKLPPESILVIYDDMALPLGKLRLRPNGSAGGHNGMKSLIAHLNTQEFKRLRVGIGSTQQN 145          
BLAST of mRNA_S-firma_F_contig1088.1170.1 vs. uniprot
Match: A0A1Q8TUY6_ALKPS (Peptidyl-tRNA hydrolase n=2 Tax=Bacillales TaxID=1385 RepID=A0A1Q8TUY6_ALKPS)

HSP 1 Score: 145 bits (365), Expect = 6.140e-38
Identity = 72/139 (51.80%), Postives = 97/139 (69.78%), Query Frame = 0
Query:  213 LVVGLGNPGDQYKMTRHNAGFMVAEELARRYGGTLKIKTAFQGEYCSIMVKGKSVGILRPITYMNNSGTSARKVMDFFKLPNNAVITLVDEVALNFGQLRLKTKGGTAGHNGLKSLQAHLKTQEYTRLRIGVGGEDANV 351
            L+VGLGNPG +Y+ TRHNAGF+V ++ A+  G  LK +T F+G Y S +V G+ V +L+P+TYMN SG S R  MD+FK+    V+ + D++ L  GQ+RL+ KGG  GHNG+KSL AHL T E+ R+RIGV   D  V
Sbjct:    9 LIVGLGNPGAKYENTRHNAGFIVIDQCAKTMGIELK-ETKFKGVYGSAVVDGEKVFLLKPLTYMNLSGESVRPFMDYFKIDLEDVMIIFDDMDLPVGQIRLRQKGGHGGHNGIKSLNAHLGTNEFKRIRIGVERPDPGV 146          
BLAST of mRNA_S-firma_F_contig1088.1170.1 vs. uniprot
Match: UPI0019D87B7D (Aminoacyl-tRNA hydrolase n=1 Tax=Leptolyngbyaceae cyanobacterium M65_K2018_010 TaxID=2747810 RepID=UPI0019D87B7D)

HSP 1 Score: 145 bits (365), Expect = 1.030e-37
Identity = 75/166 (45.18%), Postives = 105/166 (63.25%), Query Frame = 0
Query:  213 LVVGLGNPGDQYKMTRHNAGFMVAEELARRYGGTLKIKTAFQGEYCS-IMVKGKSVGILRPITYMNNSGTSARKVMDFFKLPNNAVITLVDEVALNFGQLRLKTKGGTAGHNGLKSLQAHLKTQEYTRLRIGVGGEDANVCPWRGGRPAALKHWQQHFGSFRCSVR 377
            L+VGLGNPG +Y  TRHN GF V ++L++R+   L+ +  FQ EY   + +KG+ + +L+P+TYMN SG S R  +D+ KLP  AV+ + D++ L  G+LRL+  G   GHNG+KS+ AHLKTQE+ RLRIG+G    N     G   A + H     GSF  + R
Sbjct:   15 LIVGLGNPGPKYAGTRHNIGFEVVDQLSKRWAIPLREERRFQAEYGGGLGIKGQKLHLLKPLTYMNRSGQSIRAALDWLKLPPGAVLVIYDDMDLPVGRLRLRLSGSAGGHNGMKSIIAHLKTQEFCRLRIGIGAARKNT----GADHAVVSH---VLGSFSQAER 173          
BLAST of mRNA_S-firma_F_contig1088.1170.1 vs. uniprot
Match: F8L348_SIMNZ (Peptidyl-tRNA hydrolase n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) TaxID=331113 RepID=F8L348_SIMNZ)

HSP 1 Score: 144 bits (363), Expect = 1.170e-37
Identity = 67/137 (48.91%), Postives = 90/137 (65.69%), Query Frame = 0
Query:  212 LLVVGLGNPGDQYKMTRHNAGFMVAEELARRYGGTLKIKTAFQGEYCSIMVKGKSVGILRPITYMNNSGTSARKVMDFFKLPNNAVITLVDEVALNFGQLRLKTKGGTAGHNGLKSLQAHLKTQEYTRLRIGVGGED 348
             L+ GLGNPG +Y+ TRHN GFMV +  A + G T K  +  QGE  S  V    V +L P TYMN SG S RKV+D++K+     + + D++AL+FG LR + KG + GHNGLK +++HL TQEY RLR+G+G  D
Sbjct:    6 FLITGLGNPGKKYENTRHNFGFMVVKAFAEKQGWTFKADSNLQGEIASGTVSESKVILLLPKTYMNLSGQSVRKVLDYYKIDLTHFLVVADDIALDFGTLRFREKGSSGGHNGLKDIESHLGTQEYQRLRLGIGDRD 142          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1088.1170.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIA6_9PHAE1.910e-8657.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSW9_ECTSI2.680e-6487.50Peptidyl-tRNA hydrolase n=1 Tax=Ectocarpus silicul... [more]
A0A4D9CWV7_9STRA5.980e-4860.00Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A836CKJ3_9STRA6.200e-4565.83Peptidyl-tRNA hydrolase n=1 Tax=Tribonema minus Ta... [more]
A0A7S3ACE0_9RHOD8.550e-4347.48Peptidyl-tRNA hydrolase n=2 Tax=Rhodosorus marinus... [more]
A0A2A4YKD0_9BACT2.320e-3951.13Peptidyl-tRNA hydrolase n=1 Tax=Candidatus Aeropho... [more]
A0A0C1YMG5_9CYAN1.760e-3849.64Peptidyl-tRNA hydrolase n=4 Tax=Cyanobacteria TaxI... [more]
A0A1Q8TUY6_ALKPS6.140e-3851.80Peptidyl-tRNA hydrolase n=2 Tax=Bacillales TaxID=1... [more]
UPI0019D87B7D1.030e-3745.18Aminoacyl-tRNA hydrolase n=1 Tax=Leptolyngbyaceae ... [more]
F8L348_SIMNZ1.170e-3748.91Peptidyl-tRNA hydrolase n=1 Tax=Simkania negevensi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001328Peptidyl-tRNA hydrolasePFAMPF01195Pept_tRNA_hydrocoord: 213..348
e-value: 1.9E-43
score: 148.4
IPR001328Peptidyl-tRNA hydrolaseTIGRFAMTIGR00447TIGR00447coord: 212..348
e-value: 2.3E-47
score: 159.1
IPR001328Peptidyl-tRNA hydrolasePANTHERPTHR17224PEPTIDYL-TRNA HYDROLASEcoord: 202..346
IPR036416Peptidyl-tRNA hydrolase superfamilyGENE3D3.40.50.1470coord: 212..361
e-value: 9.6E-50
score: 170.9
IPR036416Peptidyl-tRNA hydrolase superfamilySUPERFAMILY53178Peptidyl-tRNA hydrolase-likecoord: 212..350
IPR018171Peptidyl-tRNA hydrolase, conserved sitePROSITEPS01196PEPT_TRNA_HYDROL_2coord: 318..328
IPR018171Peptidyl-tRNA hydrolase, conserved sitePROSITEPS01195PEPT_TRNA_HYDROL_1coord: 224..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1088contigS-firma_F_contig1088:23241..25628 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1088.1170.1mRNA_S-firma_F_contig1088.1170.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1088 23241..25628 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1088.1170.1 ID=prot_S-firma_F_contig1088.1170.1|Name=mRNA_S-firma_F_contig1088.1170.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=411bp
VLTCSTQHGRLAGIDVAAGQEKKRKNMLVYARGSSHKFRLSLMALVCVRF
QCISTQAFLVSNTPRVAAPAPRGLGKTAMVKQSATASPSRRSNSGALCST
GRSSPLLPSARPRELPRPRVPRALASSSSSTSPPNHACSPAAPEGSASVP
SAAPEVGKKPAQASAAAGAGGGQGFGAKQAEKPAGKETPQLQRRPIPLRP
TQPKTPPRGNNLLVVGLGNPGDQYKMTRHNAGFMVAEELARRYGGTLKIK
TAFQGEYCSIMVKGKSVGILRPITYMNNSGTSARKVMDFFKLPNNAVITL
VDEVALNFGQLRLKTKGGTAGHNGLKSLQAHLKTQEYTRLRIGVGGEDAN
VCPWRGGRPAALKHWQQHFGSFRCSVRFWHVWWTRHLVWLGECLRCAHFL
LLRDAELKVLT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018171Pept_tRNA_hydro_CS
IPR036416Pept_tRNA_hydro_sf
IPR001328Pept_tRNA_hydro