prot_S-firma_F_contig10867.1155.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10867.1155.1
Unique Nameprot_S-firma_F_contig10867.1155.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length116
Homology
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BLAST of mRNA_S-firma_F_contig10867.1155.1 vs. uniprot
Match: A0A6H5LD80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD80_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 2.050e-47
Identity = 85/115 (73.91%), Postives = 97/115 (84.35%), Query Frame = 0 
Query:    1 MVLSQVDLEERAKRDLDQARARRQEAADREFQRKEADDKRKAAARGRWDGVPVDRSRLLRDTKASKERALEPEDLDDLEDARASLPAHCSRIAISGRDHRVNAGRAVPAWRRGVL 115
            ++ SQVD+E+RA+RD+D+ARARRQE A +E  +KEA+ ++KAAA GRW GV  DRSRLLR TKASKER LEPEDLDDLED RASLPAHCS IAISGRD R N GRAVPAWRRG L
Sbjct:   74 IMFSQVDIEDRARRDVDRARARRQEVALKELHQKEAEQRKKAAACGRWVGVEADRSRLLRGTKASKERMLEPEDLDDLEDRRASLPAHCSPIAISGRDLRFNQGRAVPAWRRGCL 188
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10867.1155.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LD80_9PHAE2.050e-4773.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 9..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10867contigS-firma_F_contig10867:2241..3000 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10867.1155.1mRNA_S-firma_F_contig10867.1155.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10867 2232..3000 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10867.1155.1 ID=prot_S-firma_F_contig10867.1155.1|Name=mRNA_S-firma_F_contig10867.1155.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=116bp
MVLSQVDLEERAKRDLDQARARRQEAADREFQRKEADDKRKAAARGRWDG
VPVDRSRLLRDTKASKERALEPEDLDDLEDARASLPAHCSRIAISGRDHR
VNAGRAVPAWRRGVL*
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