prot_S-firma_F_contig10849.1137.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10849.1137.1
Unique Nameprot_S-firma_F_contig10849.1137.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length288
Homology
BLAST of mRNA_S-firma_F_contig10849.1137.1 vs. uniprot
Match: A0A6H5KMY2_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMY2_9PHAE)

HSP 1 Score: 232 bits (591), Expect = 1.910e-68
Identity = 170/319 (53.29%), Postives = 199/319 (62.38%), Query Frame = 0
Query:    1 MVCTMLCRALVRGCDEAAALLTPAATVAVRRMADQRWLWATLGELLQKSADATAATGEAGERGGADKGGG----GSVGKKSGKEKGAVPRVLKPETLVLILKLFSIGLESAAVSDAVFFKALDVVANLLRLASPPXXXXXXXXXT----SDGKRKPPXLXXXXXXXXXXXXXXXXXXXXAVVPRSALEDVVNQAAIRATRPTRRPRTEVEEEQIKEAFERVFAKSPPAWASKLSEYRAKHAEKLAK------------------------KASEISKPISIKGPKREREEAXXXXXXXXXXXXXXSDAARKRKSRRVDV 287
            +VCTMLCRA+VRG DEAAA+L PAA  AV+RMADQRWLWA+LGEL Q+SADA+AAT  A      ++GGG    G  GKK GKEKG +PRVLKPETL+L+L+LFS GLE A V+DAVF KAL++VA LL LASP XXXXXXXXX        K KP                       A++PRSALEDVVNQAA RA RP RRP ++ EE + KEAF +V AKSPP WA+K+SEYRAK AEK  K                         A   S+PISIKGPKR R+EA               D   ++KSRRV+V
Sbjct:  298 LVCTMLCRAMVRGSDEAAAVLMPAAKAAVKRMADQRWLWASLGELAQRSADASAATAAAAAP--VNEGGGVVAAGVAGKKCGKEKGTMPRVLKPETLLLVLELFSTGLELALVTDAVFIKALELVAGLLPLASPXXXXXXXXXXXXXXXGGDKSKP------------KPSAPGKGAVTALLPRSALEDVVNQAAARAARPPRRPLSQAEELRAKEAFAKVLAKSPPGWANKVSEYRAKLAEKSRKGGGGKVVGDGGGXXXXXXXXXXXXXAGRPSRPISIKGPKRGRQEAGGGGDEGV------DDTDSRKKSRRVNV 596          
BLAST of mRNA_S-firma_F_contig10849.1137.1 vs. uniprot
Match: D7FZE7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE7_ECTSI)

HSP 1 Score: 232 bits (591), Expect = 1.270e-66
Identity = 177/320 (55.31%), Postives = 203/320 (63.44%), Query Frame = 0
Query:    1 MVCTMLCRALVRGCDEAAALLTPAATVAVRRMADQRWLWATLGELLQKSADATAATGEAGERGGADKGGG----GSVGKKSGKEKGAVPRVLKPETLVLILKLFSIGLESAAVSDAVFFKALDVVANLLRLASPPXXXXXXXXXT-----SDGKRKPPXLXXXXXXXXXXXXXXXXXXXXAVVPRSALEDVVNQAAIRATRPTRRPRTEVEEEQIKEAFERVFAKSPPAWASKLSEYRAKHAEKLAKKAS------------------------EISKPISIKGPKREREEAXXXXXXXXXXXXXXSDAARKRKSRRVDV 287
            +VCTMLCRA+VRG DEAA +L PAA  AV+RMADQRWLWA+LGEL+Q+SADA+AA   A     A  GGG    G  GKK GKEKGAVPRVLKPETL+L+L+LFS GLE A V+DAVF KAL++VA LL LASP XXXXXXXXX         K KP                       A++PRSALEDVVNQAA RA RP RRP +E EE + KEAF +VFAKSPP WA+K+SEYRAK AEK  K  +                            PISIKGPKR R+E   XXXXX         A+RK+KSRRV+V
Sbjct:  557 LVCTMLCRAMVRGSDEAAGVLMPAAKAAVKRMADQRWLWASLGELVQRSADASAAAVAAAP---AKDGGGVVAAGVAGKKGGKEKGAVPRVLKPETLLLVLELFSTGLELALVTDAVFIKALELVAGLLPLASPXXXXXXXXXXXXXXXXGGDKSKP------------KPSAPGKGAVAALLPRSALEDVVNQAAARAARPPRRPLSEAEELRAKEAFAKVFAKSPPGWANKVSEYRAKLAEKSRKGGAGKVVGGGDXXXXXXXXXXXXXXXXXXXXPISIKGPKRGRQETGGXXXXXVDDA-----ASRKKKSRRVNV 856          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10849.1137.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KMY2_9PHAE1.910e-6853.29Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FZE7_ECTSI1.270e-6655.31Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10849contigS-firma_F_contig10849:1155..2438 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10849.1137.1mRNA_S-firma_F_contig10849.1137.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10849 792..2829 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10849.1137.1 ID=prot_S-firma_F_contig10849.1137.1|Name=mRNA_S-firma_F_contig10849.1137.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=288bp
MVCTMLCRALVRGCDEAAALLTPAATVAVRRMADQRWLWATLGELLQKSA
DATAATGEAGERGGADKGGGGSVGKKSGKEKGAVPRVLKPETLVLILKLF
SIGLESAAVSDAVFFKALDVVANLLRLASPPPPASTTTAATSDGKRKPPP
LPLPGKGSSAAGAGAGAGAAAAVVPRSALEDVVNQAAIRATRPTRRPRTE
VEEEQIKEAFERVFAKSPPAWASKLSEYRAKHAEKLAKKASEISKPISIK
GPKREREEASGGGGGGAGGEVGGSDAARKRKSRRVDV*
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