prot_S-firma_F_contig10847.1135.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10847.1135.1
Unique Nameprot_S-firma_F_contig10847.1135.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length220
Homology
BLAST of mRNA_S-firma_F_contig10847.1135.1 vs. uniprot
Match: UPI0018D655C1 (zinc finger FYVE domain-containing protein 1-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D655C1)

HSP 1 Score: 56.6 bits (135), Expect = 9.400e-6
Identity = 25/53 (47.17%), Postives = 34/53 (64.15%), Query Frame = 0
Query:   99 CSACGIQFTWRMRRHHCRGCKKAVCDPCSKERLQIVG-GDNKRHRVCHPCIKQ 150
            CS C ++FT +MR+HHCR C K VCD CS +R  +   G ++  RVC  C K+
Sbjct:  995 CSCCQVEFTSKMRKHHCRACGKGVCDECSGKRSPVPSRGWDEAVRVCDNCDKK 1047          
BLAST of mRNA_S-firma_F_contig10847.1135.1 vs. uniprot
Match: A0A8B7Y0G1_ACAPL (zinc finger FYVE domain-containing protein 1-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y0G1_ACAPL)

HSP 1 Score: 55.8 bits (133), Expect = 1.710e-5
Identity = 24/53 (45.28%), Postives = 35/53 (66.04%), Query Frame = 0
Query:   99 CSACGIQFTWRMRRHHCRGCKKAVCDPCSKERLQIVG-GDNKRHRVCHPCIKQ 150
            CS C ++FT +MR+HHCR C K VC  CS++R  +   G ++  RVC+ C K+
Sbjct: 1000 CSCCQLEFTSKMRKHHCRACGKGVCGDCSEKRRPVPSRGWDEAVRVCNKCDKK 1052          
BLAST of mRNA_S-firma_F_contig10847.1135.1 vs. uniprot
Match: A0A0S7GUH1_9TELE (FYCO1 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7GUH1_9TELE)

HSP 1 Score: 53.9 bits (128), Expect = 7.390e-5
Identity = 29/83 (34.94%), Postives = 36/83 (43.37%), Query Frame = 0
Query:   95 QSKSCSACGIQFTWRMRRHHCRGCKKAVCDPCSKERLQIVGGDNKRHRVCHPCIKQHLASGRTRDNRLVRPQSVAPSSLRSSP 177
            ++  C  C  QFTW +RRHHCR C +  C  CS     +     K+ R C  C  QH A         V    V PS  R+ P
Sbjct:  657 EATHCLGCNDQFTWWVRRHHCRVCGRIFCYNCSNN-FVLTKHSGKKERCCSDCYMQHSAVVEKYIESEVSSSDVLPSPARAGP 738          
BLAST of mRNA_S-firma_F_contig10847.1135.1 vs. uniprot
Match: A0A0S7GRV8_9TELE (FYCO1 (Fragment) n=3 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7GRV8_9TELE)

HSP 1 Score: 53.9 bits (128), Expect = 7.670e-5
Identity = 29/83 (34.94%), Postives = 36/83 (43.37%), Query Frame = 0
Query:   95 QSKSCSACGIQFTWRMRRHHCRGCKKAVCDPCSKERLQIVGGDNKRHRVCHPCIKQHLASGRTRDNRLVRPQSVAPSSLRSSP 177
            ++  C  C  QFTW +RRHHCR C +  C  CS     +     K+ R C  C  QH A         V    V PS  R+ P
Sbjct:  847 EATHCLGCNDQFTWWVRRHHCRVCGRIFCYNCSNN-FVLTKHSGKKERCCSDCYMQHSAVVEKYIESEVSSSDVLPSPARAGP 928          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10847.1135.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
UPI0018D655C19.400e-647.17zinc finger FYVE domain-containing protein 1-like ... [more]
A0A8B7Y0G1_ACAPL1.710e-545.28zinc finger FYVE domain-containing protein 1-like ... [more]
A0A0S7GUH1_9TELE7.390e-534.94FYCO1 (Fragment) n=1 Tax=Poeciliopsis prolifica Ta... [more]
A0A0S7GRV8_9TELE7.670e-534.94FYCO1 (Fragment) n=3 Tax=Poeciliopsis prolifica Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000306FYVE zinc fingerSMARTSM00064fyve_4coord: 94..153
e-value: 3.5E-5
score: 33.2
IPR000306FYVE zinc fingerPFAMPF01363FYVEcoord: 94..150
e-value: 2.1E-12
score: 47.0
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 89..162
e-value: 2.9E-14
score: 54.6
NoneNo IPR availablePANTHERPTHR39490FAMILY NOT NAMEDcoord: 94..199
IPR017455Zinc finger, FYVE-relatedPROSITEPS50178ZF_FYVEcoord: 93..152
score: 11.59
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 95..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10847contigS-firma_F_contig10847:2454..4807 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10847.1135.1mRNA_S-firma_F_contig10847.1135.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10847 2454..4807 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10847.1135.1 ID=prot_S-firma_F_contig10847.1135.1|Name=mRNA_S-firma_F_contig10847.1135.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=220bp
MSDTEDVQLPIPSRTTGVYASGVNSLRSGRGGTAGAAGRSSRKVVEGLRT
ASSRRLNYSSFTSNGSNKGMNGENTEGSATGSIAGAGRGGGGGTQSKSCS
ACGIQFTWRMRRHHCRGCKKAVCDPCSKERLQIVGGDNKRHRVCHPCIKQ
HLASGRTRDNRLVRPQSVAPSSLRSSPFESRDTSRNVSRDASRHGPGSSS
KGLATYAEDQEPGEPRPPPP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD
IPR017455Znf_FYVE-rel
IPR013083Znf_RING/FYVE/PHD
IPR000306Znf_FYVE