prot_S-firma_F_contig1084.1126.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1084.1126.1
Unique Nameprot_S-firma_F_contig1084.1126.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length331
Homology
BLAST of mRNA_S-firma_F_contig1084.1126.1 vs. uniprot
Match: A0A6H5KK33_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK33_9PHAE)

HSP 1 Score: 399 bits (1026), Expect = 3.840e-123
Identity = 209/363 (57.58%), Postives = 238/363 (65.56%), Query Frame = 0
Query:   14 ASPPEGMRPPETEEFDLSGWDSLEMTSVLRWPCPLEAVCKIYTAAITSLTEGLPWIRAADVWHVSSILEHEAVFTPEPNP-------------IDNQAIVAGDTNAAGGDTESIGTLTVDSGRTVNT--RCGDGARFCERVIGKTWSGYPAVVLRSLRVPGRDEAACTARWLRGNGEDGGGVFGDDEGWTDQRLRLLADEWRVCTVMGD---------GDGRPGL--------------------------GSSVGSPSASP---GASRRSVPRPFMLHTGHVIVPFLNGCLRESESGGNREVFGHGVVLAVDRGVDWRRWESHLIETAVVATRCFERLERDGEVAERERVKGWKEELLHSQT 323
            +SPP  +R PE +E  LS WDSL+MTS+LRWPCP EAVC IY+AA+ +LTEGLPW+RAADVWHVSSI +H+ VF PE  P             +D++A +    N   GD   IG+LTVDSG T         GA FCER++GKTWSG PAV+LRSLRVPGRDEA C ARWLRGNGE GGGVFGDD+GWTDQRLRLLADEWR CT  G          G G PG                           GS   +  +SP     S R+ PRPFMLHTGHVIVPFLNG +RE+E G    V GHGVVLAVDRGVDWR WESHL ETA VATRCF+RLER+GE  ERERV  W E+LL+  T
Sbjct: 2547 SSPPRSIRRPELDEVGLSSWDSLDMTSILRWPCPYEAVCNIYSAAVKALTEGLPWVRAADVWHVSSIPDHKKVFEPETPPPPIKTRKDNNDVALDDEASIIDGNNTVDGDMGRIGSLTVDSGGTAGHGGEIRGGAYFCERIVGKTWSGSPAVILRSLRVPGRDEAVCAARWLRGNGEGGGGVFGDDDGWTDQRLRLLADEWRACTSAGGMPDYELASGGGGGPGFRCRDITATTAPATVGSGTSGTAAAIAGSDTAATLSSPLPLALSPRATPRPFMLHTGHVIVPFLNGRVRETEKGCPNVVIGHGVVLAVDRGVDWRCWESHLTETAAVATRCFDRLEREGESVERERVNDWAEKLLNRNT 2909          
BLAST of mRNA_S-firma_F_contig1084.1126.1 vs. uniprot
Match: D8LEV4_ECTSI (C2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEV4_ECTSI)

HSP 1 Score: 350 bits (897), Expect = 8.140e-106
Identity = 189/328 (57.62%), Postives = 214/328 (65.24%), Query Frame = 0
Query:   49 EAVCKIYTAAITSLTEGLPWIRAADVWHVSSILEHEAVFTPEPNP-------------IDNQAIVAGDTNAAGGDTESIGTLTVDSGRTVNTRCGD---GARFCERVIGKTWSGYPAVVLRSLRVPGRDEAACTARWLRGNGEDGGGVFGDDEGWTDQRLRLLADEWRVCTVMGD---------GDGRPG--------------LGSSVGSPSASPGASR--------------RSVPRPFMLHTGHVIVPFLNGCLRESESGGNREVFGHGVVLAVDRGVDWRRWESHLIETAVVATRCFERLERDGEVAERERVKGWKEELLHSQT 323
            EAVCKIY+AA+ +LTEGLPW+RAADVWHVSSI +H+ VF PEP               +D++A +   +N   GD  SIG+LTVDSG       GD   GA FCER++GKTWSG PAV+LRSLRVPGRDEAAC ARWLR NGE GGGVFGDD+GWTDQRLRLLADEW  CT  G          G G PG              +GS     +A  G+                R+ PRPFMLHTGHVIVPFLNG +RE+E  G   V GHGVVLAVDRGVDWR WESHL ETA VATRCFERLER+GE  ERERV  W E+LL+  T
Sbjct: 5290 EAVCKIYSAAVKALTEGLPWVRAADVWHVSSIPDHKKVFEPEPPXXPIKTRKDNNDVAVDDEASIVDGSNTVDGDMGSIGSLTVDSGGPAG-HGGDIRVGAYFCERIVGKTWSGAPAVILRSLRVPGRDEAACAARWLRENGEGGGGVFGDDDGWTDQRLRLLADEWTACTSAGGMPDYGLASGGGGGPGFRSRDIAATTAPATVGSGTSGTAAVAGSDTAATLSSPLPLVLLPRATPRPFMLHTGHVIVPFLNGRVRETEKRGPNVVIGHGVVLAVDRGVDWRCWESHLTETAAVATRCFERLEREGESVERERVNDWAEKLLNRNT 5616          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1084.1126.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KK33_9PHAE3.840e-12357.58C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LEV4_ECTSI8.140e-10657.62C2 domain containing protein n=1 Tax=Ectocarpus si... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1084contigS-firma_F_contig1084:267..1449 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1084.1126.1mRNA_S-firma_F_contig1084.1126.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1084 2..1713 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1084.1126.1 ID=prot_S-firma_F_contig1084.1126.1|Name=mRNA_S-firma_F_contig1084.1126.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=331bp
MDASVGSGRREPGASPPEGMRPPETEEFDLSGWDSLEMTSVLRWPCPLEA
VCKIYTAAITSLTEGLPWIRAADVWHVSSILEHEAVFTPEPNPIDNQAIV
AGDTNAAGGDTESIGTLTVDSGRTVNTRCGDGARFCERVIGKTWSGYPAV
VLRSLRVPGRDEAACTARWLRGNGEDGGGVFGDDEGWTDQRLRLLADEWR
VCTVMGDGDGRPGLGSSVGSPSASPGASRRSVPRPFMLHTGHVIVPFLNG
CLRESESGGNREVFGHGVVLAVDRGVDWRRWESHLIETAVVATRCFERLE
RDGEVAERERVKGWKEELLHSQTRWYSGDP*
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