prot_S-firma_F_contig1083.1115.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1083.1115.1
Unique Nameprot_S-firma_F_contig1083.1115.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length1212
Homology
BLAST of mRNA_S-firma_F_contig1083.1115.1 vs. uniprot
Match: A0A6H5JI30_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI30_9PHAE)

HSP 1 Score: 619 bits (1597), Expect = 3.530e-194
Identity = 505/1198 (42.15%), Postives = 622/1198 (51.92%), Query Frame = 0
Query:   21 GVDNVSASNGGXXDGDTRPAALKEEVEDKQRSSAAKKGLQMLMNPASPIISLTKKFRSRPSRGASLEG--LQALSGMDGSGEFVMTPVGSDAAR-AGDGDGEVSCAGSDD-GSVESGESV--EEGGXXXXXXXXXXXDAGTVVGDAGAAAAKPKRVTKLARGISHGFRRMKKGARPMGASEAMTIGRASLMGGSSDNSYLRAHD--FDGEGARSLSGGWGKGSSSPEGGARG-KIPQNWDLPTTNIPTSAAAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGMPPPVPPQMQRVLTEPCTAYSSAR--------SLDSPRKEDLAELGGREFGSGDMCRTPAIATATATPGGHSALEQETAAPGPXXRGRPSALE--KSXXXXPKGMWXXXXXXXXXXXXXXXXXXXXGSPRRLRDHFSRSRPHSPQSXXXXXXXXXXXXXXAGRSPGADSLQGSHRSHDEEAGAAPRLHTASEAAAXXXXXXADVCRAKVNLEKIFHDKRISDENIGVPELSNKEQEXXXXXXQQLTALSGPKDATATTTAQVTAQPQLEPHKCVPAAPPSELKYGDRLRLWVRLRSPSRNHHRLAGGSDILNMAADNWQGQRVGGKDSGAGGTPADGVLAAGGGGYVGSLDKVQRVSKKLFKRSELAMIGQPEGN-AAGFATCHFKAVDPENKHRDGDVVRYGDVVLLVDDRNYVWTDNAHLLPGSLRMKPRGSKRQITVAFKPFLAELKADQNDVLPPVVFGPQGLQIMTVDHGHKDSGNRKRRTSSRKGFHALTAFSKKNSGGSNVAGAFLCSDGRGEAIVFEVHLPNASPVGDPSPVVTKVTIHVDEQSQHQAXXXXXXXXXXXXXXXPALSEKPPGVLKSTNAVTSLEAPGRKTTWAGEAPTAPLTPLVNGTGXXXXXXXVDGLHGRGHGSGDIAGSDSGIGVGPEIGRGVVEREREEGEKKRPKSMVA----AKRLLKTVHKRRSSLNHARSGSFAGGILDGRVS-RTNLYSLSASGPGRSPTNAEAASG---GDDE---LSEDGDASSGGEMVMGAFEGLKWGEMVQFKMPAQGEVGPNDPLLTLRLSNRYTATLTSKQLRDNAGLGKFPVKASKMKGPRAVSDPSGDLPTGNGLVYLKCTLTPIVCSEPEESALHARPEKLPPTEADADEQAAGRLGRRFLPRALRTLFPTPGKAVVAKAS 1187
            G+ N S SNGG   G+ +PA + E  + K R + +KKG Q  + P SPI  L KKFRS+ SRG SL+G  L+ALSG+D  G+FV+TPVGSD    AGD D        DD GS  SG  V  EEGG             G   G+   +  +PKR  KLARG+S+  RR+ K  R +G+SEA              N YLRAHD  FDG+G RS +GGWG   +SPE G R  K+PQ+W +P T+   ++                                       G+PP +P ++ R  T+P +   S R          +S RKEDL E G     +  +CR               A EQE        RGRP  LE   S    PKG W                     SP+R+ + F+R +P SP S               GR  G D  +G           A  + T++   +          +AK+N EKI   +  SDE I                       S  +DA A   A V   P      CVPAA P ELKYGDRLRL  R+      HHR +GGSDI            VG    G  G PA+  +  GGGG+VGSL+KVQ+VS KLF+R+E+A+I Q EGN AAGF +CHFKAVDPENK +DGD+VRYGDV+ LVDDRNYVW+DN HLLPGSLRMK RGSKRQI V+FKPFLA LK D N+ LP VVF   GLQIMTV++G KD   +KRRTS+RK FHALTAFSKKNSG  +V GAFLC+DGRGE +VFEVHLPN SP+GDPSPVVTKVT+HVDE+                    P L +K   +L  +  V           W  EA TAPL+ +                 G G G G  A   SGI +   I +G         EK RPKSMV+      R LK  HKRRSSL+  R  S + G      S R  +   S   P  SPTN+E +     GDDE   +SE+G A S G+MV    EGL+WG+ V+FKMP +G+   +D L+TLRLSN YTATLTS++LR +AGLGKFPVKA KMKG +A++  SGDLP+GNGLV+LKC LTP  CSE + +A       + P       +  G L  R      R LFP  G  V A  S
Sbjct:   36 GISNTS-SNGGLS-GEVQPAGISEGEDSKNRDTVSKKGFQRWLRPPSPIPGLKKKFRSKRSRGGSLDGQVLRALSGVDREGDFVLTPVGSDGTNYAGDLDTSAGTDALDDAGSDNSGAGVGVEEGGVSAEAVAANLRGGGRGEGE-DRSTGQPKRSIKLARGLSNVARRLTK--RSVGSSEA--------------NIYLRAHDADFDGDGDRSYTGGWGNSPTSPEHGERHRKLPQDWHVPLTS---TSPVTPPLASPPPQADQGRPPRSSTSSRRPSPTTSGEMLMPGLPPQLP-RITRGFTDPGSPGDSRRFEGTVTGVGNESRRKEDLLEKG-----ADGVCRA-------------EAREQEGKPE--VARGRPGLLEGSNSKSLSPKGGWEGIRERHRSRS---------ASPKRV-NPFNR-KPVSPSSTGNGQDQDQTQ----GR--GQDGQEGHTDQATSSFNPASPVTTSATPRSNEVTAPQATSKAKLNAEKILLGRSRSDEVI----------HGHVKRGDSGHPSSVVEDAPA---APVKVSP------CVPAAQPPELKYGDRLRLKARV------HHRPSGGSDIS-----------VGALGEGGAGPPAESAVG-GGGGFVGSLEKVQKVSTKLFRRNEVAVISQSEGNNAAGFTSCHFKAVDPENKKKDGDIVRYGDVIFLVDDRNYVWSDNGHLLPGSLRMKSRGSKRQIAVSFKPFLAPLKLDANNELPAVVFSTHGLQIMTVEYGSKDQNIKKRRTSTRKNFHALTAFSKKNSGNPSVNGAFLCADGRGEGVVFEVHLPNESPIGDPSPVVTKVTVHVDEK--------------------PRLHDKMSYLLPLSTKVHEAH-------WPSEALTAPLSCVA--------------ADGSGTGQGSSA---SGIRLEDGISQG--------SEKPRPKSMVSKVLPVGRKLKKAHKRRSSLSQKRPKSASVGHSRSATSGRGFMVPASIPSPACSPTNSELSRNNLDGDDEELLVSEEGGALSDGDMV----EGLRWGDSVRFKMPDEGQEILDDKLMTLRLSNGYTATLTSEELRKHAGLGKFPVKAIKMKGSQALNQ-SGDLPSGNGLVFLKCMLTPCSCSETDNAAADTGAASVTPL---GQGEVVG-LAERVFHNVSRILFPDAGGKVEASFS 1075          
BLAST of mRNA_S-firma_F_contig1083.1115.1 vs. uniprot
Match: D7FMT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMT9_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 7.410e-41
Identity = 148/391 (37.85%), Postives = 189/391 (48.34%), Query Frame = 0
Query:   24 NVSASNGGXXDGDTRPAALKEEVEDKQRSSAAKKGLQMLMNPASPIISLTKKFRSRPSRGASLEG--LQALSGMDGSGEFVMTPVGSDAAR-AGDGDGEVSCAGSDD-GSVESGESVEEGGXXXXXXXXXXXDAGTVVGDAGAAAAKPKRVTKLARGISHGFRRMKKGARPMGASEAMTIGRASLMGGSSDNSYLRAHD--FDGEGARSLSGGWGKGSSSPEGGARG-KIPQNWDLPTTNIPTSAAAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGMPPPVPPQMQRVLTEPCTAYSSAR--------SLDSPRKEDLAELGGREFGSGDMCRTPAIATATATPGGHSALEQETAAPGPXXRGRPSALE--KSXXXXPKGMW 397
            N + S+ G   G+ +PA + E  + + R + +KKG Q  + P SPI  L KKFRS+ SRG+SL+G  L ALSG+D  G+FV+TPVGSD    AGD D        DD GS  SG SVEEGG             G   G+   +  +PKR TKLARG+S+  RR+ K  R +G+SEAM++GR        DNSYLRAHD  FDG+G RS +GGW    +SPE G R  K+PQ+W LP T+   ++                                       G+PPP  P++ R LT+P +     R          +S RKEDL E GG       +CR               A EQE        RGR   LE  KS    PKG W
Sbjct:   32 NSNTSSNGGLSGEVQPAVISEGEDSRNRDTVSKKGFQRWLRPPSPIPGLKKKFRSKRSRGSSLDGEVLHALSGVDREGDFVLTPVGSDGNNYAGDLDTSAGTDALDDAGSDNSGASVEEGGVSAEAVAANLRGGGRGEGE-DHSTGQPKRATKLARGLSNVARRLTK--RSVGSSEAMSLGR--------DNSYLRAHDADFDGDGPRSFTGGWSNSPTSPEHGERHRKLPQDWHLPLTS---TSPVTPPMASPPPQADQGRPPRSSTSSRRPSPTTSGEMLMPGLPPPRMPRITRGLTDPGSPCDHRRFEGTVTGVGSESRRKEDLLEKGGE-----GVCRA-------------EAREQEGKPE--VARGRRGLLEGSKSKSLSPKGGW 388          
BLAST of mRNA_S-firma_F_contig1083.1115.1 vs. uniprot
Match: D7G345_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G345_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 1.360e-37
Identity = 143/363 (39.39%), Postives = 175/363 (48.21%), Query Frame = 0
Query:   51 RSSAAKKGLQMLMNPASPIISLTKKFRSRPSRGASLEG--LQALSGMDGSGEFVMTPVGSDAAR-AGDGDGEVSCAGSDD-GSVESGESVEEGGXXXXXXXXXXXDAGTVVGDAGAAAAKPKRVTKLARGISHGFRRMKKGARPMGASEAMTIGRASLMGGSSDNSYLRAHD--FDGEGARSLSGGWGKGSSSPEGGARGKIPQNWDLPTTNIPTSAAAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGMPPPVPPQMQRVLTE---PCT-----AYSSARSLDSPRKEDLAELGGREFGSGDMCRTPAIATATATPGGHSALEQETAAPGPXXRGRPSALE--KSXXXXPKGMW 397
            R + +KKG Q L+ P SPI  L KKFRS+ SRG+SL+G  L ALSG+D  G+FV+TPVGSD    AG  D        DD GS  SG SVEEGG             G   G+   +  +PKR TKLARG+ +  RR+ K  R +G+SEAM+IGR        DNSYLRAHD  FDGEG RS +GGW    +SPE G R K+PQ+W LP T+   ++                                       G+PPP  P + R LT+   PC        ++    +S RKEDL E GG       +CR               A EQE        RGRP  LE  KS    PKG W
Sbjct:   59 RDTVSKKGFQRLLRPPSPIPGLKKKFRSKRSRGSSLDGEVLHALSGVDREGDFVLTPVGSDGNNYAGGLDTSAGTDALDDAGSDNSGASVEEGGVSAEAVAANLRGGGRGKGE-DHSTGQPKRATKLARGLLNVARRLTK--RSVGSSEAMSIGR--------DNSYLRAHDADFDGEGPRSFTGGWSNSPTSPEHGER-KLPQDWHLPLTS---TSPVTPPMASPPPQADQGRPPRSSTGSRRPSPTRSGEILMPGLPPPRMPPITRGLTDLGSPCDHRRFEGTATGVGSESRRKEDLLEKGGE-----GVCRA-------------EAREQEGKPE--VARGRPGLLEGSKSKSLSPKGGW 386          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1083.1115.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JI30_9PHAE3.530e-19442.15CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
D7FMT9_ECTSI7.410e-4137.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G345_ECTSI1.360e-3739.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1083contigS-firma_F_contig1083:8185..17852 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1083.1115.1mRNA_S-firma_F_contig1083.1115.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1083 6745..17852 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1083.1115.1 ID=prot_S-firma_F_contig1083.1115.1|Name=mRNA_S-firma_F_contig1083.1115.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=1212bp
MDPTVVSQPAGGSRGSNNSSGVDNVSASNGGGGDGDTRPAALKEEVEDKQ
RSSAAKKGLQMLMNPASPIISLTKKFRSRPSRGASLEGLQALSGMDGSGE
FVMTPVGSDAARAGDGDGEVSCAGSDDGSVESGESVEEGGGGGGGGGGSA
GDAGTVVGDAGAAAAKPKRVTKLARGISHGFRRMKKGARPMGASEAMTIG
RASLMGGSSDNSYLRAHDFDGEGARSLSGGWGKGSSSPEGGARGKIPQNW
DLPTTNIPTSAAAQGQGQGQDRALSCSSSSSRSRSRSRPASPSPSPTKAL
GMPPPVPPQMQRVLTEPCTAYSSARSLDSPRKEDLAELGGREFGSGDMCR
TPAIATATATPGGHSALEQETAAPGPAPRGRPSALEKSKSLSPKGMWGVG
VGSQARSASAERERSRSGSPRRLRDHFSRSRPHSPQSPQSTESPQARSSV
QAGRSPGADSLQGSHRSHDEEAGAAPRLHTASEAAAAAAAAAADVCRAKV
NLEKIFHDKRISDENIGVPELSNKEQEQEQHHHQQLTALSGPKDATATTT
AQVTAQPQLEPHKCVPAAPPSELKYGDRLRLWVRLRSPSRNHHRLAGGSD
ILNMAADNWQGQRVGGKDSGAGGTPADGVLAAGGGGYVGSLDKVQRVSKK
LFKRSELAMIGQPEGNAAGFATCHFKAVDPENKHRDGDVVRYGDVVLLVD
DRNYVWTDNAHLLPGSLRMKPRGSKRQITVAFKPFLAELKADQNDVLPPV
VFGPQGLQIMTVDHGHKDSGNRKRRTSSRKGFHALTAFSKKNSGGSNVAG
AFLCSDGRGEAIVFEVHLPNASPVGDPSPVVTKVTIHVDEQSQHQASAVP
PPHRHPHPHSHPALSEKPPGVLKSTNAVTSLEAPGRKTTWAGEAPTAPLT
PLVNGTGTGTGGGGVDGLHGRGHGSGDIAGSDSGIGVGPEIGRGVVERER
EEGEKKRPKSMVAAKRLLKTVHKRRSSLNHARSGSFAGGILDGRVSRTNL
YSLSASGPGRSPTNAEAASGGDDELSEDGDASSGGEMVMGAFEGLKWGEM
VQFKMPAQGEVGPNDPLLTLRLSNRYTATLTSKQLRDNAGLGKFPVKASK
MKGPRAVSDPSGDLPTGNGLVYLKCTLTPIVCSEPEESALHARPEKLPPT
EADADEQAAGRLGRRFLPRALRTLFPTPGKAVVAKASSVIDVERVFGKPD
AGGAWPRVLKR*
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