prot_S-firma_F_contig10827.1108.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10827.1108.1
Unique Nameprot_S-firma_F_contig10827.1108.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length296
Homology
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BLAST of mRNA_S-firma_F_contig10827.1108.1 vs. uniprot
Match: A0A6H5KRH1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRH1_9PHAE)

HSP 1 Score: 271 bits (694), Expect = 9.630e-86
Identity = 160/269 (59.48%), Postives = 175/269 (65.06%), Query Frame = 0 
Query:   40 VLLHAEHITLPRRLLRLPPRSLLPSAGGIDAATLTLRLCGVSASEEGATLAREELVKPLVGRYCDAELLYREQRPGASPSLGG----------QASRPIAVCHIHRRRGVLWRDILQPRPDPKAGFGEHLLSEGLAVLREEVWWGPG-YDAPAPGSTDATAEARTSEA----HHRRSTGGGDARAVRDGDYAKQPFPALKHLLEDRERFVAAERSAELARRGVWELTP--DEGTGRDKTAAGMGGDGVMPAGLKQRSAALVRVFRGFFG 291
            VLLHAEHITLPRRLLRLPPRSLLPSAGG DAAT TLRLCGVSA  EG  LAR ELVKPLVG YCDAELL+REQR  ASPS             Q S P+AVCHIHRRRGVLWRD+LQ R DPKAGFGE+L+S+GLA LREE WW     +   P     TA AR + A     HR  TG   A     GD ++QPFPALK LLEDRE  VAAE  A+ A RG+W+L     EG GRD  AAG          L +  A + RV  G FG
Sbjct:  146 VLLHAEHITLPRRLLRLPPRSLLPSAGGSDAATFTLRLCGVSAESEGVLLARNELVKPLVGFYCDAELLFREQRSAASPSATAGVGFGVGATEQVSGPVAVCHIHRRRGVLWRDMLQSRIDPKAGFGEYLISQGLARLREEQWWAAADRNGLTPAPAVVTAAARPTSAVSAQTHRHRTGA--ASTGEGGDDSEQPFPALKRLLEDREILVAAEGDAKRASRGLWDLPQRGGEGGGRDSAAAG------RAKSLIEGVAGIARVLTGLFG 406
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10827.1108.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KRH1_9PHAE9.630e-8659.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10827contigS-firma_F_contig10827:157..1616 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10827.1108.1mRNA_S-firma_F_contig10827.1108.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10827 50..2232 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10827.1108.1 ID=prot_S-firma_F_contig10827.1108.1|Name=mRNA_S-firma_F_contig10827.1108.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=296bp
MYRRKLQGCRWAPSCIRTAGSLPLSCRAKAPLPPLLTLSVLLHAEHITLP
RRLLRLPPRSLLPSAGGIDAATLTLRLCGVSASEEGATLAREELVKPLVG
RYCDAELLYREQRPGASPSLGGQASRPIAVCHIHRRRGVLWRDILQPRPD
PKAGFGEHLLSEGLAVLREEVWWGPGYDAPAPGSTDATAEARTSEAHHRR
STGGGDARAVRDGDYAKQPFPALKHLLEDRERFVAAERSAELARRGVWEL
TPDEGTGRDKTAAGMGGDGVMPAGLKQRSAALVRVFRGFFGWGGK*
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