prot_S-firma_F_contig1080.1077.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1080.1077.1
Unique Nameprot_S-firma_F_contig1080.1077.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length571
Homology
BLAST of mRNA_S-firma_F_contig1080.1077.1 vs. uniprot
Match: A0A6H5K7R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R2_9PHAE)

HSP 1 Score: 511 bits (1316), Expect = 6.140e-174
Identity = 268/397 (67.51%), Postives = 300/397 (75.57%), Query Frame = 0
Query:    2 MMGKKMSVAAMAGVTVALFASTITLTAAAVCSNGLEGIQSDSLDVCCPEACGVCGGLGCTPANTSTLTSADCCATEVVESGVFCDVSGVAPCIVTTAAAPATSVCVNGQTGVQDPNTDVCCPLECGDFCGGTGCGTIPGVEASQCCSTIIMNSGAVCSDTVAPPCTVVASVADNTTTCSNGLSGIEDPVNLICCNAACGQCGGAGCGSIPGLAGTDCCSDEIEATAQLCSVSLAAPCVVDPPAFVASMCPNGIAGVQDGSVCCAEACNGQCGGVGCGSIVGTAGASDCCSATILQTGVPCGVGVAAPCVMQNGTFTNAPAAAPTIPP---PGATLAXXXXXXXXXXXXXXXXXXXGGVVGATTAPTAGSRDFAFTEGPTIAGDVNGDNLVNSADTGI 395
            M+GK  S  A+  V +AL   T+T  A AVCSNGLEGIQS SLDVCC E C VCGG+ CTPANTS+LTSADCCATE+VESG FCDVS  APCI+TTAAA   SVC NGQTGV DP+TDVCCPLECGD CGG GCG+IPGV A+QCCS++I+ SGAVCSDTV+ PC V A+ ADN+TTCSNG+ GIEDPVNLICC+AACG CGG GCG++ GL G DCCS+EI     LCSV+  APCV+DPP FVAS CPNG+AGVQDGSVCCAE CNG CGG GCGSIVGT GA DCCS TIL TGV C  GV APC+M NGT+T+AP AAPT PP   PG T+A                    G V AT AP AG+R+F FT+ PT   DVNGD LVNSADTGI
Sbjct:    1 MLGKATSFTALVCVAIALLVGTMT-PAGAVCSNGLEGIQSTSLDVCCVEGCEVCGGVDCTPANTSSLTSADCCATEIVESGTFCDVSMAAPCIITTAAAANDSVCENGQTGVPDPDTDVCCPLECGDSCGGEGCGSIPGVNATQCCSSLIIESGAVCSDTVSAPCVVGAAEADNSTTCSNGIVGIEDPVNLICCDAACGLCGGPGCGNVTGLTGLDCCSEEIAVVNDLCSVTNEAPCVMDPPDFVASTCPNGLAGVQDGSVCCAEECNGVCGGEGCGSIVGTNGAEDCCSNTILATGVDCEEGVMAPCIMLNGTYTDAPMAAPTFPPAAAPGTTVAP-------------------GAVAATEAPVAGTREFRFTQAPTQLLDVNGDGLVNSADTGI 377          
BLAST of mRNA_S-firma_F_contig1080.1077.1 vs. uniprot
Match: D8LG71_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG71_ECTSI)

HSP 1 Score: 355 bits (910), Expect = 1.040e-113
Identity = 204/383 (53.26%), Postives = 239/383 (62.40%), Query Frame = 0
Query:    6 KMSVAAMAGVTVALFASTITLTAAAVCSNGLEGIQSDSLDVCCPEACGVCGGLGCTPANTSTLTSADCCATEVVESGVFCDVSGVAPCIVTTAAAPATSVCVNGQTGVQDPNTDVCCPLECGDFCGGTGCGTIPGVEASQCCSTIIMNSGAVCSDTVAPPCTVVA-SVADNTTTCSNGLSGIEDPVNLICCNAACGQCGGAGCGSIPGLAGTDCCSDEIEATAQLCSVSLAAPCVVDPPAFVASMCPNGIAGVQDGSVCCAEACNGQCGGVGCGSIVGTAGASDCCSATILQTGVPCGVGVAAPCVMQNGTFTNAPAAAPTIPP-------PGATLAXXXXXXXXXXXXXXXXXXXGGVVGATTAPTAGSRDFAFTEG-PTIA 379
            KM+ AA+ GV +AL  S      A  C+ G+ G++S SLDVCC   CG CGG+GCTPANTS+LT+ DCCATE+ ESGV C  +GVAPCI++T AA A SVC NGQTGVQDP+TDVCCPLECG+ CGG GCGTIPGV+ASQCC++II  SG VC D +  PCT VA +VAD+   CSNG  GIE+    +CC+ AC  CGG+ CG++ GL G DCC+  I A  +LCS   +APCVVDPP   AS C NG+AGV  GSVCCAE CNG            T GA DCCSATIL   + C     APCVM  GTFT APA  PT+         PG T+                          T APT GSRD  F  G PT A
Sbjct:    3 KMNFAALLGVVLALAGSV----GAQTCAGGISGVESTSLDVCCTLECGTCGGVGCTPANTSSLTANDCCATEISESGVMCSDTGVAPCILSTEAASADSVCDNGQTGVQDPDTDVCCPLECGESCGGEGCGTIPGVDASQCCASIIEQSGIVCGDGIEAPCTQVAVAVADSV--CSNGFPGIENEDATVCCDPACVVCGGSTCGNVAGLTGADCCTGTIIANDELCSEKGSAPCVVDPPEVTASTCANGLAGVSSGSVCCAEVCNGVXXXXXXXXXXXTNGAEDCCSATILAANIACVD--TAPCVMVEGTFTPAPAVVPTVAATTTAPLAPGETVTMAPTP-----------------TSQTAAPTPGSRDLDFGTGVPTPA 360          
BLAST of mRNA_S-firma_F_contig1080.1077.1 vs. uniprot
Match: D8LML5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LML5_ECTSI)

HSP 1 Score: 269 bits (688), Expect = 6.570e-84
Identity = 136/201 (67.66%), Postives = 158/201 (78.61%), Query Frame = 0
Query:    2 MMGKKMSVAAMAGVTVALFASTITLTAAAVCSNGLEGIQSDSLDVCCPEACGVCGGLGCTPANTSTLTSADCCATEVVESGVFCDVSGVAPCIVTTAAAPATSVCVNGQTGVQDPNTDVCCPLECGDFCGGTGCGTIPGVEASQCCSTIIMNSGAVCSDTVAPPCTVVASVADNTTTCSNGLSGIEDPVNLICCNAACGQC 202
            M+GK  S  A+  V +AL   T+T  A AVCSNGLEGIQS SLD CC E CG+CGG+GCTPANTS+LTSADCCATE++ESG  C+VS  APCI+TTAAA   SVC NGQTGVQDP+TDVCCPL CGD CGG GCG++ GV+A+QCCS +I+ SGAVCSDTV+ PC V A+ ADN+TTCSNG+ GIEDPVNLI     C  C
Sbjct:    1 MLGKATSFTALVCVAIALLVGTMT-PAGAVCSNGLEGIQSTSLDACCVEECGLCGGVGCTPANTSSLTSADCCATEIIESGTLCEVSMAAPCIITTAAASNDSVCENGQTGVQDPDTDVCCPLVCGDSCGGEGCGSLAGVDATQCCSNLIIESGAVCSDTVSAPCVVGAAEADNSTTCSNGIVGIEDPVNLIWYVWMCSAC 200          
BLAST of mRNA_S-firma_F_contig1080.1077.1 vs. uniprot
Match: D8LML4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LML4_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 3.170e-50
Identity = 101/159 (63.52%), Postives = 110/159 (69.18%), Query Frame = 0
Query:  240 VDPPAFVASMCPNGIAGVQDGSVCCAEACNGQCGGVGCGSIVGTAGASDCCSATILQTGVPCGVGVAAPCVMQNGTFTNAPAAAPTIPP---PGATLAXXXXXXXXXXXXXXXXXXXGGVVGATTAPTAGSRDFAFTEGPTIAGDVNGDNLVNSADTGI 395
            +DPP FVAS CPNGIAGVQDGSVCCAE CNG CGG GCGSIVGT GA DCCS+TIL TGV C VGV APC+M NGT+T+AP AAPT PP   PG T+A                    G V  T AP AG+R+F FT+ PT   DVNGD LVNSADTGI
Sbjct:    1 MDPPDFVASTCPNGIAGVQDGSVCCAEECNGVCGGEGCGSIVGTNGAEDCCSSTILTTGVDCDVGVVAPCIMLNGTYTDAPMAAPTFPPVAAPGTTVAP-------------------GAVATTEAPLAGTREFQFTQAPTQLLDVNGDGLVNSADTGI 140          
BLAST of mRNA_S-firma_F_contig1080.1077.1 vs. uniprot
Match: D7FZM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZM1_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 7.540e-41
Identity = 117/278 (42.09%), Postives = 143/278 (51.44%), Query Frame = 0
Query:   28 AAAVCSNGLEGIQSDSLDVCCPEACGVCGGLGCTPANTSTLTSADCCATEVVES--GVFCDVSGVAPCIVT-------------TAAAPATSVCVNGQTGVQDPNTDVCCPLECGDFCGGTGCGTIPGVEASQ-CCSTIIMNSGAVCSD--------TVAPPCTVVASVAD-NTTTCSNGLSGIEDPVNLICCNAACGQCGGAGCGSIPGLAGTD-CCSDEIEATAQLCSVSLAAPCVVD--PPA-----------FVASMCPNGIAGVQDGSVCCAE 266
            A + CSNG+ G+     DVCC EACG CGG GC  A   T  ++DCC   + E   GVFC   G APC++              TAA  A S C NG  G QD    +CC   CG  CGG GCGTIPG   S  CC + I+ +G VC +        T AP      + A   T+TCSNG+ G +D     CC A CGQCGG GCGS+PG AG   CCS ++E    LCS +  +PCV+D   PA            V S C NG+ G Q+  +CC E
Sbjct:  288 APSTCSNGIPGVSDG--DVCCLEACGQCGGEGC-GAIAGTNGASDCCPDTIKEESGGVFC---GEAPCVMAGFTPSPLNPAFDGTAAPVAPSTCSNGIAGYQDGA--ICCLEICGR-CGGDGCGTIPGTGGSDNCCPSTILAAGVVCGEAPCIIEGYTPAPAVVGGGTTAPYGTSTCSNGILGYQD--GPACCAANCGQCGGGGCGSVPGTAGASACCSSDVELAGNLCSATGVSPCVIDNYTPAPVVPDYGSAAPVVPSNCSNGLPGYQNNDICCLE 554          
BLAST of mRNA_S-firma_F_contig1080.1077.1 vs. uniprot
Match: A0A6H5JC43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC43_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 1.010e-39
Identity = 97/225 (43.11%), Postives = 126/225 (56.00%), Query Frame = 0
Query:   29 AAVCSNGLEGIQSDSLDVCCPEACGVCGGLGCTPANTST-LTSADCCATEVVESGVFCDVSGVAPCIVTTAAAPA---TSVCVNGQTGVQDPNTDVCCPLECGDFCGGTGC---GTIPGVEASQCCSTIIMNSGAVCSDTVAPPCTVVASVADNTT---TCSNGLSGIEDPVNLICCNAACGQCGGAGC---GSIPGLAGTDCCSDEIEATAQLCSVSLAAPCVV 240
            A  CSNGLEGI ++ + VCCP ACG CGG GC  +  +  L  + CC   V  S  +CD +  APCI+ +   P+    + C NG  G+ D N  VCCPL CG  CGGTGC   G   G++ S CC   I  SG  C +T   PC + +S A + T   TCSNG+ GI D   ++CC   CGQCGGAGC   G+  GL    CC   I+A+ + C  +  APC++
Sbjct:  190 ARTCSNGLEGIDANGV-VCCPLACGQCGGTGCNTSGAAFGLDGSSCCGGGVKASDEYCDETNEAPCIIGSRPTPSPTSANTCSNGLEGI-DGNGVVCCPLGCGQ-CGGTGCNTSGAAAGLDGSSCCGGSIKASGKYCDETNDAPCIIGSSPAPSPTPSETCSNGVEGI-DGNGVVCCPLGCGQCGGAGCTTSGAAAGLGADSCCGGSIKASDEYCDETNEAPCII 410          
BLAST of mRNA_S-firma_F_contig1080.1077.1 vs. uniprot
Match: A0A6H5JG29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG29_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 6.770e-39
Identity = 128/393 (32.57%), Postives = 160/393 (40.71%), Query Frame = 0
Query:   31 VCSNGLEGIQSDSLDVCCPEACGVCGGLGCTPANTSTLTSADCCATEVVESGVFCDVSGVAPCIVTTAAAPATSVCVNGQTGVQDPNTDVCCPLECGDFCGGTGCGTIPG-VEASQCCSTIIMNSGAVCSDTVAPPCTVVASVA----------------------------------------------------------DNTTTCSNGLSGIEDPVNLICCNAACGQCGGAGCGSIPGLAGTD-CCSDEIEATAQLCSVSLAAPCVVDPPAFVAS--------------------------------------MCPNGIAGVQDGSVCCAEACNGQCGGVGCGSIVGTAGASDCCSATILQTGVPCGVGVAAPCVMQNGTFTNAPAAAPT 325
            +CSNG+ GIQS +   CC   CG CGG GC       L   +CC +E+ + G  C V   APC+V         +C NG  G+Q  N   CC  ECG  CGG+GC  + G +    CC + I + G +CS  +A PC V  S                                                              + TCSNG+ GI+      CC A CG CGG+GC  + G  G D CC  EIE   +LCSV +AAPCVVD  A   S                                      MC NGI G+Q G+ CC   C G CGG GC  + G  G  +CC + I   G  C V +AAPCV+       +P A PT
Sbjct: 1575 MCSNGIPGIQSGN--ACCLAECGGCGGSGCAQLGGG-LGEDNCCQSEIEDFGELCSVKMAAPCVVD-------DMCSNGIPGIQSGNA--CCLAECGG-CGGSGCAQLGGGLGEDNCCQSEIEDFGELCSVKMAAPCVVDGSAPAPSPVAMPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDTCSNGIPGIQS--GNACCLAECGGCGGSGCAQLGGGLGEDNCCQSEIEDFGELCSVKMAAPCVVDGSAPAPSPVAMPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDMCSNGIPGIQSGNACCLAECGG-CGGSGCAQLGGGLGEDNCCQSEIEDFGELCSVKMAAPCVVDGSAPAPSPVAMPT 1951          
BLAST of mRNA_S-firma_F_contig1080.1077.1 vs. uniprot
Match: D7FJ68_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ68_ECTSI)

HSP 1 Score: 141 bits (355), Expect = 2.330e-31
Identity = 135/464 (29.09%), Postives = 169/464 (36.42%), Query Frame = 0
Query:   32 CSNGLEGIQSDSLDVCCPEACGVCGGLGCTPANTSTLTSADCCATEVVESGVFCDVSGVAPCIVT-TAAAPA----------------------------------------------------------------TSVCVNGQTGVQDPNTDVCCPLECGDFCGGTGCGTIPG-VEASQCCSTIIMNSGAVCSDTVAPPCTVVAS------VADNTT--------------------------------------TCSNGLSGIEDPVNLICCNAACGQCGGAGCGSIPGLAGTD-CCSDEIEATAQLCSVSLAAPCVVDPPAFVAS-----------------------------------------------------------MCPNGIAGVQDGSVCCAEACNGQCGGVGCGSIVGTAGASDCCSATILQTGVPCGVGVAAPCVMQNGTFTNAPAAAPT 325
            CSNG+ GIQS +   CC   CG CGG GC       L   +CC +E+ + G  C V+  APC+V  +A AP+                                                                T  C NG  G+Q  N   CC  ECG  CGG+GC  + G +    CC + I + G +CS T+A PC V  S      VA  T                                       TCSNG+ GI+      CC A CG CGG+GC  + G  G D CC  EIE   +LCSV++AAPCVVD  A   S                                                            C NGI G+Q G+ CC   C+G CGG GC  + G  G  +CC + I   G  C V +AAPCV+       +P A PT
Sbjct: 1977 CSNGIPGIQSGN--ACCLAECGGCGGSGCAQLGGG-LGEDNCCQSEIEDFGELCSVTMAAPCVVDGSAPAPSPVAMPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTDTCSNGIPGIQSGNA--CCLAECGG-CGGSGCAQLGGGLGEDNCCQSEIEDFGKLCSVTLAAPCVVDGSAPAPSPVAMPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADTCSNGIPGIQS--GNACCLAECGGCGGSGCAQLGGGLGEDNCCQSEIEDFGELCSVTMAAPCVVDGSAPAPSPVAMPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTCSNGIPGIQSGNACCLAECDG-CGGSGCAQLGGGLGEDNCCQSEIEDFGELCSVTMAAPCVVDGSAPAPSPVAMPT 2431          
BLAST of mRNA_S-firma_F_contig1080.1077.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 4.270e-28
Identity = 101/301 (33.55%), Postives = 138/301 (45.85%), Query Frame = 0
Query:   32 CSNGLEGIQSDSLDVCCPEACGVCGGLGCTPANTSTLTSADCCATEVVESGVFCDVSGVAPCIVTTAAAPATSVCVNGQTGVQDPNTDVCCPLECGDFCGGTGCGTIPGVEASQCCSTIIMNSGAVCSDTVAPPCTVVASVADNTTTCSNGLSGIEDPVNLI----CCNAACGQCGGAGCGSIPG-LAGTDCCSDEIEATAQLCSVSLAAPCVVDPPAFVASMCPNGIA------------GVQDGSVCCAEACNGQCGGVGCGSIVGTAGASDCCSATILQTGVPCGVGVAAPCVMQNGT 315
            C   L+GI       CC   C  CGG GC+      LT ADCC ++++ +G  C   G APC++   ++P T     G  G+     DVCC  ECG  CGG+GCG+  G+ A++CC++ I  +   C      PC V    +          SG      ++    CC+A C +CGG+GC    G L G DCC+ +I     LCSV+ AAPC+VD                          GV  G  CC+  C  +CGG GC    G    +DCC++ I      C V  AAPC++   T
Sbjct:   21 CDGILKGIY------CCSAGCEECGGSGCSDRGDG-LTGADCCTSDILAAGKAC---GSAPCLLEEGSSP-TPASSGGCDGILQG--DVCCSAECGT-CGGSGCGSRAGLTANECCTSTIAAANVPCGSA---PCVVDGDTSPTXXXXXXXXSGSFTCDGVLKGDYCCSAGCVECGGSGCSDRGGGLTGADCCTSDIS---NLCSVTGAAPCIVDGDTSPTXXXXXXXXXXXXXSGSFTCDGVLKGDYCCSAGCV-ECGGSGCSDRGGGLTGADCCTSDISNL---CSVTGAAPCIVDGDT 297          
BLAST of mRNA_S-firma_F_contig1080.1077.1 vs. uniprot
Match: D7FJ60_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ60_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 1.210e-23
Identity = 118/351 (33.62%), Postives = 144/351 (41.03%), Query Frame = 0
Query:   32 CSNGLEGIQSDSLDVCCPEACGVCGGLGCTPANTST-LTSADCCATEVVESGVFCDVSGVAPCIVTTAAAP-ATSVCVN--GQTGVQDPNTDVCCPLECGDFCGGTGC---GTIPGVEASQCCSTIIMNSGAVCSDTVAPPCTVVAS--------VADNTTTCSNGLS-----GIEDPVNLI---------CCNAACGQCGGAGCGSIPGLAGTDCCSDEI-----------EATAQLCSVSLAAPCVVDPP-------AF----VASMCPNGIAGVQ--DGSVCCAEACNGQCGGVGCGSIVGTAGASDCCSATILQTGVPCGVGVAAPCVMQNGTFTNAPAAAPTIPPP 329
            CSNG+EGI+S + DVCCP ACG CGG  CT A  +  L   DCC  +++ SG  C  + +APCI+  A+   A   C N  G  G+   + DVCCP EC   CGG  C       G+    CC + I   G  CSD+ A PC    S        V + +T     L        EDP  +           C   C        G + G   +  C DE            E TA  CS +    C   P        AF    +   C  GI GV+   G VCC  +C G+CGG  C   VG  G   CC  TI      C    AAPCV         P  APT P P
Sbjct:   52 CSNGIEGIESANGDVCCPTACGFCGGEACTEAAVNAGLDDGDCCFGDIIVSGASCSENQMAPCIIDDASQESAGDTCSNTDGVEGISSGDGDVCCPSEC-VLCGGRDCTEAALAAGLADGDCCVSDITKEGVKCSDSGAAPCVAYDSEDETGSPLVQEASTPVYIALGCGKIGDYEDPFTVSSTVSDLTAEACYELCASESSLYFGLVEGNVCS--CGDEETFVETFLDTYDEQTAATCSTA----CPGSPDETCGGAQAFDLYQILPTCTGGIVGVEAASGDVCCPFSC-GECGGDRC---VGEGG---CCEHTIQSREDLCEYTNAAPCVFNVVAPPPTPVPAPTTPMP 388          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1080.1077.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5K7R2_9PHAE6.140e-17467.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG71_ECTSI1.040e-11353.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LML5_ECTSI6.570e-8467.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LML4_ECTSI3.170e-5063.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZM1_ECTSI7.540e-4142.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JC43_9PHAE1.010e-3943.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JG29_9PHAE6.770e-3932.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJ68_ECTSI2.330e-3129.09WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FWE8_ECTSI4.270e-2833.55Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7FJ60_ECTSI1.210e-2333.62WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 551..569
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 570..570
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..550
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..29
score: 0.809
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR028974TSP type-3 repeatSUPERFAMILY103647TSP type-3 repeatcoord: 461..517

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1080contigS-firma_F_contig1080:644..6709 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1080.1077.1mRNA_S-firma_F_contig1080.1077.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1080 632..7843 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1080.1077.1 ID=prot_S-firma_F_contig1080.1077.1|Name=mRNA_S-firma_F_contig1080.1077.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=571bp
MMMGKKMSVAAMAGVTVALFASTITLTAAAVCSNGLEGIQSDSLDVCCPE
ACGVCGGLGCTPANTSTLTSADCCATEVVESGVFCDVSGVAPCIVTTAAA
PATSVCVNGQTGVQDPNTDVCCPLECGDFCGGTGCGTIPGVEASQCCSTI
IMNSGAVCSDTVAPPCTVVASVADNTTTCSNGLSGIEDPVNLICCNAACG
QCGGAGCGSIPGLAGTDCCSDEIEATAQLCSVSLAAPCVVDPPAFVASMC
PNGIAGVQDGSVCCAEACNGQCGGVGCGSIVGTAGASDCCSATILQTGVP
CGVGVAAPCVMQNGTFTNAPAAAPTIPPPGATLAPAAAAGNATTIGTLAP
AAAGGVVGATTAPTAGSRDFAFTEGPTIAGDVNGDNLVNSADTGIVGDTN
GDGVVDGLDTGLVGDTNNDGVVNDLDEVVGGTVAPTSAPTSAPAVAAAST
GAPTAAPTSADGTRDVELGTPSPADTNRDGFVDANDGVDTNGDGVIDEND
GVDTNGDGVIDSQDGAPVIEATPAPSSAVDTETDAGTSGNGAMSTVSLPA
GSVYASVIGVAVSVGGLLLL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028974TSP_type-3_rpt