prot_S-firma_F_contig108.1075.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig108.1075.1
Unique Nameprot_S-firma_F_contig108.1075.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length319
Homology
BLAST of mRNA_S-firma_F_contig108.1075.1 vs. uniprot
Match: A0A6H5L3C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3C0_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 7.920e-76
Identity = 129/200 (64.50%), Postives = 156/200 (78.00%), Query Frame = 0
Query:    3 PGTHAPIKKYNYERSLFRWVMSRHPEPFEAHGISTKTLERAPLAREAFYTSNWPGAKVLVHCSHDNKYERTAFFDAIIERGLRDG-TRFNVDHVTSDERSKLGITMDRASGKYYLHAYGSTRGRRSSTRR---GSATSSEGDLDQ----HPIIRELGDLIHSEIEAAGDNPDVSYQKSRCEPGATRGSTVLTFSVTIQSR 194
            P +H PIKKYNYERSL+RW++SRHPEPFE HGI+TKTLERAPLAREAFY S W GAKVLV    DNK+ERT FFD IIERGL  G TRF+V+HV SDE+SKLGIT+D A+GKYYL AYGS + RR + RR   GS +SS+ D D     HP ++++GDLI SEIEAAG++ +V   +SR EP +  GSTVLTFS++I+ R
Sbjct:    2 PSSHLPIKKYNYERSLYRWLVSRHPEPFEEHGITTKTLERAPLAREAFYRSGWLGAKVLVQNHEDNKFERTNFFDQIIERGLGHGDTRFSVEHVKSDEQSKLGITLDSATGKYYLQAYGSAKTRRPANRRNSAGSVSSSDADQDPAEPPHPTVKKVGDLIASEIEAAGEDAEVRLDESRLEPASASGSTVLTFSISIRRR 201          
BLAST of mRNA_S-firma_F_contig108.1075.1 vs. uniprot
Match: A0A835Z9J0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9J0_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.450e-31
Identity = 61/120 (50.83%), Postives = 81/120 (67.50%), Query Frame = 0
Query:    1 MPPGTHAPIKKYNYERSLFRWVMSRHPEPFEAHGISTKTLERAPLAREAFYTSNWPGAKVLVHCSHDNKYERTAFFDAIIERGLRDGTRFNVDHVTSDERSKLGITMDRASGKYYLHAYG 120
            M      PIK+YNYERS +RW++ RHP  FE  G+++  LERAP+AR+A + ++W G+K LV C  + +YERT FFD  I+RGL  GTRF ++H+T  ER  LGI  D  +GK YL  YG
Sbjct:    1 MASAASTPIKRYNYERSAYRWLLQRHPRQFEKEGLTSTALERAPVARKALFHTSWSGSKKLVRCV-EGRYERTVFFDTFIKRGLGFGTRFAIEHLTPQERQILGICED-PTGKVYLAHYG 118          
BLAST of mRNA_S-firma_F_contig108.1075.1 vs. uniprot
Match: A0A836CGN8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGN8_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.240e-30
Identity = 60/110 (54.55%), Postives = 77/110 (70.00%), Query Frame = 0
Query:    7 APIKKYNYERSLFRWVMSRHPEPFEAHGISTKTLERAPLAREAFYTSNWPGAKVLVHCSHDNKYERTAFFDAIIERGLRDGTRFNVDHVTSDERSKLGITMDRASGKYYL 116
             PIKKYNYERS +RW+++RHP+ FEA G++T  LERAP AR+AF+T  WPGA++L+ C  + +YERT FFD II RGL+  TRF   H+T  E   L I    A  K+YL
Sbjct:    3 TPIKKYNYERSAYRWLLARHPKQFEARGVTTTVLERAPAARKAFWTCGWPGAQLLIRCV-EGRYERTVFFDTIIARGLQLSTRFAYPHLTPAESDALQIRQSGA--KHYL 109          
BLAST of mRNA_S-firma_F_contig108.1075.1 vs. uniprot
Match: A0A836C9L8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9L8_9STRA)

HSP 1 Score: 124 bits (312), Expect = 4.760e-28
Identity = 55/113 (48.67%), Postives = 79/113 (69.91%), Query Frame = 0
Query:    7 APIKKYNYERSLFRWVMSRHPEPFEAHGISTKTLERAPLAREAFYTSNWPGAKVLVHCSHDNKYERTAFFDAIIERGLRDGTRFNVDHVTSDERSKLGITMDRASGKYYLHAY 119
            +PI+KYNYERS +RW+M+RH + F   GI+TKTLE A  AR+AF+ S W GA++L+      ++ERT  F+ II+RGL  GTRF++D +++ E++ LGIT D    KY L  +
Sbjct:  336 SPIQKYNYERSTYRWLMARHADIFARCGITTKTLESASRARQAFHQSGWEGARMLIRADSQGRHERTPLFETIIKRGLSKGTRFDIDTISAREQATLGITFDSTLEKYVLSQF 448          
BLAST of mRNA_S-firma_F_contig108.1075.1 vs. uniprot
Match: A0A835YVN4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVN4_9STRA)

HSP 1 Score: 116 bits (290), Expect = 3.710e-25
Identity = 54/104 (51.92%), Postives = 74/104 (71.15%), Query Frame = 0
Query:    7 APIKKYNYERSLFRWVMSRHPEPFEAHGISTKTLERAPLAREAFYTSNWPGAKVLVHCSHDNKYERTAFFDAIIERGLR--DGTRFNVDHVTSDERSKLGITMD 108
            +P +KYNYERS++RW+M+R+ E FE  GI+TKTLE A  AREAFY S WPGA+ L+      ++ERT FF+AII+RG+R   G RF+   +T+ E + LGI  +
Sbjct:    4 SPTQKYNYERSMYRWLMARNSEAFETCGITTKTLESAKRAREAFYGSGWPGARYLIQVDSSGRHERTPFFEAIIQRGIRHQSGCRFDGAALTAGELTSLGIVRN 107          
BLAST of mRNA_S-firma_F_contig108.1075.1 vs. uniprot
Match: A0A6H5JN30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN30_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 8.200e-22
Identity = 51/106 (48.11%), Postives = 68/106 (64.15%), Query Frame = 0
Query:    7 APIKKYNYERSLFRWVMSRHPEPFEAHGISTKTLERAPLAREAFYTSNWPGAKVLVHCSHDNKYERTAFFDAIIERGLRDGTRFNVDHVTSDERSKLGITMDRASG 112
             P+ K+N+ERS +RW+++RHP  FE    + + L+ A  AR+AFY   W  AKVL+  S D K+ERT FFDAII RGLR+ TRF+   +T DE   LG+  D   G
Sbjct:   10 TPVMKWNFERSCYRWLVTRHPAQFERLDFTAQILQSASRARKAFYECGWAEAKVLIRPS-DGKFERTPFFDAIIRRGLRNSTRFDAATLTEDEIEALGMHRDETLG 114          
BLAST of mRNA_S-firma_F_contig108.1075.1 vs. uniprot
Match: A0A835YN03_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN03_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 3.870e-6
Identity = 25/54 (46.30%), Postives = 38/54 (70.37%), Query Frame = 0
Query:   67 DNKYERTAFFDAIIERGLRDGTRFNVDHVTSDERSKLGITMDRASGKYYLHAYG 120
            + +YERTAFF+++I RGL+  TR + +H+  +E++ LGI  D A+G  YL  YG
Sbjct:   21 EGRYERTAFFESLIARGLQFATRLSAEHLLPEEKAALGIAEDAATGTVYLSHYG 74          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig108.1075.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5L3C0_9PHAE7.920e-7664.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z9J0_9STRA1.450e-3150.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CGN8_9STRA1.240e-3054.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C9L8_9STRA4.760e-2848.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YVN4_9STRA3.710e-2551.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JN30_9PHAE8.200e-2248.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YN03_9STRA3.870e-646.30Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 251..271

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig108contigS-firma_F_contig108:32387..36565 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig108.1075.1mRNA_S-firma_F_contig108.1075.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig108 32387..36802 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig108.1075.1 ID=prot_S-firma_F_contig108.1075.1|Name=mRNA_S-firma_F_contig108.1075.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=319bp
MPPGTHAPIKKYNYERSLFRWVMSRHPEPFEAHGISTKTLERAPLAREAF
YTSNWPGAKVLVHCSHDNKYERTAFFDAIIERGLRDGTRFNVDHVTSDER
SKLGITMDRASGKYYLHAYGSTRGRRSSTRRGSATSSEGDLDQHPIIREL
GDLIHSEIEAAGDNPDVSYQKSRCEPGATRGSTVLTFSVTIQSRDDGGDD
SGDDSGRRMAGSERVGAAAAAAAADAGGGNPTGMGTGTPQQPGRPAGNAP
SLEAQRRHQQHQQQQQQHQQQQQQQQPQPGSNNRESSTVAAAAAALASVA
QGGKKLKARGRPMANSNSK
back to top